Oryzias melastigma (Indian medaka): 112158908
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Entry
112158908 CDS
T07439
Symbol
cxxc1a
Name
(RefSeq) CXXC-type zinc finger protein 1a
KO
K14960
COMPASS component SPP1
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oml03000
]
112158908 (cxxc1a)
03036 Chromosome and associated proteins [BR:
oml03036
]
112158908 (cxxc1a)
Transcription factors [BR:
oml03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
112158908 (cxxc1a)
Chromosome and associated proteins [BR:
oml03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
112158908 (cxxc1a)
COMPASS/SET1 complex (yeast)
112158908 (cxxc1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CpG_bind_C
zf-CXXC
PHD
PHD_5
Motif
Other DBs
NCBI-GeneID:
112158908
NCBI-ProteinID:
XP_024148367
Ensembl:
ENSOMEG00000011705
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All DBs
Position
LG7:24899876..24910220
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AA seq
602 aa
AA seq
DB search
MAEEAAGARGDRGGEEEERAVTMETPKTPVYCVCRRPDINCFMIGCDSCSEWFHGDCIGV
SERAAKSIRVWFCVSCREKDASLEVKYRQKKSKERDDGELEGDKSNKSQNKDGSFTPQQK
LDARRGSQIKRSARMCGECDACLRTEDCAQCDFCKDMKKFGGPNKIRQKCRLRQCEVRAR
KMLRVKDEESSCSITRGRGLPRKGAGQHMDEDEEEEGFSESELELYEQYKAAGYRDLVWH
SDEEEEEEDLHLDSLRKKAVKVKHVKRRDKKPEKKKSVSAPKEESKPRRHKVKQRHKERV
RHSERAGEGGAKEVGGALRQCLGPGCTELARSTSKYCSEDCGMKLAANRIYEILPQRIQQ
WQQSPCVAEEMGRRQLERIRKEQQAARLRLTQMEKRFHDLESIIATAKLQQVQEHEEVTE
GDGDDTDLQIFCVSCSHPINPKVALRHMERCYTKYESQTSFGSMYPTRIEGATRLFCDVY
NPQSKTYCKRLQVLCPEHSRDPKIPADEVCGFPLVKDVFEPTGEFCRVSKRKCNKHYCWE
KLRRAEVDLERVRVWYKLDELFEQERNLRTAMTNRAGLLALMLHQTIQHDPITTDLRSGK
DR
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atggctgaggaggcagcaggagcccggggcgatcgtgggggcgaggaagaagagagagcc
gtcaccatggaaacccccaaaactccagtctactgtgtctgcaggagaccagacatcaac
tgtttcatgatcggctgtgacagttgctccgaatggtttcatggtgactgcatcggcgta
tcagagagggccgcaaagtccatcagagtctggttctgcgtgtcctgtagagagaaagac
gcgtctctggaggtcaaataccggcagaagaagagtaaagagagagacgatggagagcta
gagggagacaaaagcaacaaatcgcaaaataaagacgggagcttcaccccccagcagaaa
ctggacgcaaggcggggctcacagatcaagcgttcagcccgcatgtgcggcgagtgtgac
gcctgcctgaggaccgaagactgcgctcagtgtgacttctgcaaagacatgaagaagttt
ggtggccccaacaaaattcgtcagaagtgcagactccggcaatgcgaggtccgagcccgg
aagatgcttcgagtcaaagacgaggagagctcctgcagcatcaccagggggcggggcctc
cccaggaaaggggcggggcaacacatggatgaagatgaggaagaggagggcttcagtgag
agtgagctggagctgtatgaacaatacaaggcggctgggtacagagacctggtgtggcac
agtgacgaggaggaggaggaggaggatctccatctggattctctgaggaagaaagcagtg
aaggtcaaacacgtgaagagacgggacaagaagcccgagaagaagaaatccgtttctgcc
ccgaaggaggaatcaaagccccggcgacacaaagtgaagcagcggcacaaggagcgtgtg
cgccacagtgagcgagcaggtgagggtggagctaaagaggtgggcggggctctacggcag
tgtctgggtccaggttgcactgagctcgccaggagcacctccaagtactgttctgaagac
tgcggtatgaagctcgccgccaatcggatctacgagatccttccgcagaggattcagcaa
tggcagcaaagcccctgtgttgctgaagagatgggccgccggcagctcgagcgaatccgg
aaggagcagcaggcggcgaggctccgcctcacacagatggaaaaacgcttccatgatctg
gaaagtatcatcgccaccgccaagcttcagcaggtccaggagcacgaggaggtaactgag
ggggacggcgacgacacagacctccagatattctgtgtgtcctgcagtcatcccatcaac
ccaaaggtggcactgcgacacatggagagatgctacactaagtacgagagccagacctcc
tttggttccatgtatccgacccgcattgagggagccaccaggttgttctgtgatgtctac
aaccctcaaagtaaaacctactgtaaacggctgcaggttctgtgtccagaacattccagg
gatccaaagatcccagcagacgaggtgtgcggctttcctttggtcaaagacgtgttcgag
cccactggagagttctgccgggtctctaaaaggaagtgcaacaagcattactgctgggag
aagctgcggcgagccgaggtggacctcgagagagtccgagtgtggtacaagctggatgag
ctctttgagcaggagagaaatctgaggaccgccatgaccaaccgtgcaggtttgttggct
ctgatgctgcaccagaccatccagcacgacccgattaccacagacctgcgctcgggtaaa
gaccgatag
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