Oryzias melastigma (Indian medaka): 112158941
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Entry
112158941 CDS
T07439
Symbol
prex1
Name
(RefSeq) phosphatidylinositol 3,4,5-trisphosphate-dependent Rac exchanger 1 protein isoform X1
KO
K12365
phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchanger 1 protein
Organism
oml
Oryzias melastigma (Indian medaka)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
DEP
SOS1_NGEF_PH
PDZ
PDZ_6
PH_10
PH
UPF1_Zn_bind
Motif
Other DBs
NCBI-GeneID:
112158941
NCBI-ProteinID:
XP_024148418
Ensembl:
ENSOMEG00000015158
LinkDB
All DBs
Position
LG7:26710283..26809281
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AA seq
1666 aa
AA seq
DB search
MEEDDGHQQNGVPAPRDSDRQQRLRLCVLNELLNTERDYVRTLLFLQSAFLHRIQQTADD
QQCLSPEHVKILFSNIEDILELHKEVLSAVETSLQPEPQPHHSLGHVFLQFRESFSVYGE
YCSNHEKALRLLMDLNKIPNIRTFLLHCMLLGGKKSTDIPLEGYLLTPIQRICKYPLLLK
ELLKRTPKNHADYPAVQEALQAMKAVCSNINETKRQMEKLEALEQLQSHIEGWEGTNLTD
ICTELLLHGNLLKISAGNIQERVFFLFDNLLVYCKRKSRVSGKKSTKRTKSINGPLYVFR
GRINTEVMEVENVEDGTADYHSNNYTVTNGWKIHNTAKNKWFVCMAKNAEDKQKWLDAIL
REREQRESLKLGMERDAYVMIAEKGEKLYHMMMTKNRHLIKDRRRKLSIVPKCFMGNEFV
AWLIESGEISKPEEGVNLGQALLENGIIHHISDKHQFKNEQVLYRFRYDDGTYKARSEME
DIMSKGVRLYCRLHCLHTPVIKDRDYHLKTFKSVVPACKLVDWLISQGDCSTREDAVTLG
VGLCNNGFMHHVLEKSEFKDESQFFRFYADEETEGTSTKSKQLQRNDFKLIENILAKSLV
IHPEEEGYGFEIEEKNKAIVVKSVSRGSHAEMAGLQVGRKIYTINEDLLFLRPFSEVETM
IGQAFCIRRSLRLLVATKAKEIVKVPDNPDSLSFRLCGVAPPHVHAVRKGWEAAGAGLQP
GQVILKVNGNNVNHSDYQEVLEHFTAQHTHEEAPGECNWVYRAFEDVEHLQRERSPTEKE
EEEEESAFKPFPVENGSDQEEENRTNGTGDDHGLCRLSLSDGLPLVSLTVDNVHLEHGVV
YEYVNTAGIKSHVLEKITEPKGCFSLTAKILEAFCSDDSLFVRNCSQLISQSDRVVTMPQ
YEFRQICDTKLESIRRRITCYQQFAQELRNKVWPSVRQAGGRPHPLGCMDFVPTNCHINL
MQVSCPKSTTSAGRTFSIRFGRKNSIFGLDQDQAQLNLMSHTLHCVTSMGAPSWSCSGLE
GDEADGGGEVTLEDGEGGMDGLQGVHGEGGLSFLLKAEDMEAQDAYIQLYSRLDVAVREM
KQYVAQIDVLLSSITEPTEIPREEGGSLAYDPNQPPTLAPCEDGCEQDKAEQGGIKRVCF
KVNEEDQEDSGHDTMSYRDSYSECNSNRDSVLSYTSVRSNSSYLGSDEMGSGDELPCDMR
IPSDKQDKLHGCLEHLFNQVDSINSLLKGAVMTKVCEETRHFYSDHSQPEFRQTEDWTSR
CRHMIHKNIQEDPWNLPSSIKTLVESLQRFVDDGKNQLLLALLKCTDTSLQLRRDVIFCQ
AATAALCTLAEQMLTALRLRFNNAGEYQEDSKETSCKWLEQISVIGALLHFQSTLSPHRK
EERTMLEDTKAALLDLDKVSVFFRQLEDECLVTNTPVCYQVEGSRQALKVTMYLDSCHFS
ELPSRLQNGGGLRLHTVLFTRALERAEGVSQREFTEMEELQQRTNAVSLERVKAYYRRLR
AFYLEKSNLPTDSNSTAMKIDQILGLEVRDLQPSISKLLRPLNTLDDLCRLMQSYVNVRP
TSQGHPSGVSVLCVSSELCNRLGACHITMCGTGMQRCTLSVTLEQAMILARNHGLIPRCI
MQTVDIMRKQGARVELSAKNLKVMDQMPPSAPRLFRLCLPPSDGEL
NT seq
5001 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggacgacgggcatcagcagaacggcgtcccggcgcccagagactcggaccgg
cagcagcggctgcggctgtgcgtcctgaacgagctgctgaacacggagcgggactacgtc
cgaaccctgctcttcctgcagtcggcctttttgcacagaatccaacaaactgccgatgat
cagcagtgtctttctcctgaacatgtcaagatcctgttttcaaacattgaggacatcctg
gagctgcacaaagaggttttgtcagcggtggagaccagtttgcagcccgaaccccagccc
catcattctctgggacacgtgttcctccagtttagggagagcttctcggtgtacggcgag
tactgcagtaaccacgagaaggctctgcggctcctcatggacctcaacaagatccccaac
atcaggaccttcttgctgcactgcatgcttcttggagggaagaagagcaccgacattccc
ctggagggctacctcctcactcccatccagaggatctgcaagtaccctctgctgctgaag
gaactccttaaaaggactccaaagaaccacgccgactaccctgccgtgcaggaggctctg
caggccatgaaggccgtctgctccaacatcaacgagaccaagaggcagatggagaagctg
gaggctctggagcagctgcagtcccacatcgaaggctgggagggaacaaacctgacagat
atctgcacagagctgctgcttcatggaaatctgctgaaaatctcggcaggaaacattcag
gaacgcgtctttttcctcttcgacaaccttctggtctactgcaaaaggaagtccagggtt
tctggaaagaagtcaaccaaaaggaccaagtccatcaacgggccgctctatgtgttcaga
ggtcggatcaacacggaggtgatggaggtggaaaacgtggaggatgggacagcggattat
cacagcaacaactacacagtgacgaacggctggaagatccacaacacagcaaaaaacaag
tggtttgtttgcatggccaaaaacgctgaggacaagcagaaatggctggacgccatcttg
agggagcgggagcagcgtgagagtctgaagctgggaatggaacgagacgcctacgtgatg
atagcagagaagggggagaagctttaccacatgatgatgaccaagaaccgacacctgatt
aaagaccggcgccggaagctcagcattgtgcccaagtgcttcatgggaaatgagttcgtg
gcgtggctgatcgagagcggcgagatcagtaaacccgaggagggcgtcaacctgggtcaa
gctttactggaaaacggcatcattcaccacatctcagataaacaccagttcaagaacgag
caggttctgtaccgcttccgctatgacgatggaacgtacaaggcccgcagcgagatggag
gacatcatgtctaagggcgtcaggctgtactgccgcctccactgcctccacacgccagtc
atcaaggacagggactaccacctgaaaaccttcaagtctgtggttcctgcttgtaaactg
gtggactggctgatctcacagggagactgctcgacccgcgaggatgctgtgacactggga
gtggggctctgcaacaatggcttcatgcaccacgtcttggagaaaagcgagttcaaggac
gaatcccagttcttccgtttctatgcggacgaggaaacggagggaaccagcaccaagagc
aagcagctgcagaggaacgacttcaagctcatagaaaacatcttggccaaatccctggtg
atccatccagaggaggaaggctacggcttcgagatcgaagagaagaacaaggccattgtg
gtgaaatccgtcagccggggctcgcacgccgagatggctggtctgcaggtgggcaggaag
atctacaccatcaacgaggacctgctgttcctcaggcccttctcagaggtggaaaccatg
atcggccaggccttctgcatacggcgctctctgcggctgctggtcgccaccaaagccaag
gagatcgtgaaggtccccgacaacccagacagcctctccttcagactctgtggagtggct
cctcctcacgttcacgccgtcaggaaaggctgggaggcggcaggcgccgggcttcagcct
ggccaggtgattctgaaagtcaacgggaacaatgtcaaccacagtgactaccaggaggtg
ctggagcacttcaccgctcagcacactcacgaggaggctcccggagagtgtaactgggtg
tatcgcgcctttgaggatgtggagcatctgcagagagaaaggagtccgactgagaaggag
gaggaggaggaggagagcgccttcaagccgtttccagtggagaacggctcagaccaggag
gaggagaacaggaccaacgggacaggtgatgatcacgggctttgcagactttcgctgtcg
gatggccttcccctggtgagtctgaccgtggataacgtccacctggagcacggcgtggtt
tatgagtacgtcaacacggcgggcatcaagagccatgtccttgagaagatcacagagccc
aaaggatgcttcagcctcactgctaagatcctggaggcgttctgcagcgatgacagtctc
tttgtacggaactgcagccagctcatctcccagagcgaccgcgtggttaccatgccgcag
tacgagttcagacaaatctgtgacaccaagctggagagcatcagacggcgcatcacatgc
taccagcagtttgctcaggagctgaggaacaaggtgtggccctccgtccggcaggctggt
ggccgtcctcaccccctgggctgcatggacttcgttcccaccaactgtcacatcaacttg
atgcaggtgtcctgtcccaaaagcaccacctctgccggcaggactttcagcattcgcttc
ggtcgcaagaactccatctttggtctggatcaagaccaagctcagctcaacctcatgtct
cacactctgcactgcgtgaccagcatgggagcgccttcctggagctgctccggtctggaa
ggggacgaagcagatggcggcggggaggtgactctagaggacggggagggcgggatggac
ggcctacagggcgtgcacggcgaaggcggcctgagcttcctgctcaaagcggaggacatg
gaggcgcaggacgcctacattcagttgtacagccgcctggatgttgctgtgagggaaatg
aagcaatatgtcgctcagatagacgtcctcctgtcgtccatcactgaacccaccgagatc
ccgagagaagaggggggctcgctggcgtacgatcccaaccagccgcccaccctggcgccc
tgcgaggacggctgcgagcaggacaaggcggagcaggggggcattaagagagtctgcttt
aaagtgaatgaggaggaccaggaggactctggccacgacaccatgagctacagagactcc
tacagtgaatgcaacagcaacagggattcggttctgtcctacaccagcgtgcgcagtaac
agctcctacctggggagtgacgagatgggatcaggggacgagctgccctgcgacatgagg
atcccctctgacaaacaggacaagctgcacggctgcctggaacaccttttcaaccaggtc
gactccatcaacagcctcctcaaaggcgccgtcatgaccaaagtctgtgaggaaaccagg
cacttctactccgaccacagccagccagaatttcgccaaaccgaagactggacgagccgc
tgccggcacatgatccacaagaacatccaggaggacccttggaacctgcccagctctatc
aaaacactggtggagagcctgcagaggtttgtggacgatggaaagaaccagcttcttctg
gctctcctcaagtgcacagacacttccctgcagctgcggcgggatgtgatcttctgccag
gcggcgacggctgccctgtgcacgctggccgagcagatgctgacggcgttgcgtctgcga
ttcaacaacgccggcgaataccaggaggacagcaaggaaaccagctgcaagtggctggag
cagatctccgtcatcggtgctctgctgcacttccagtccacgctgtctcctcaccggaag
gaggagcgaaccatgctggaggacaccaaggcggctctgttggacttggacaaagtctca
gtgtttttccggcagctggaggacgagtgtctcgttacaaacacacctgtgtgttaccag
gtggagggcagtcgccaggctctgaaggtcaccatgtacctggacagctgtcacttcagc
gagctgcccagccgcctgcagaacggaggcgggctcagactgcacaccgtcctcttcact
agagccctggagcgagcagagggagtctctcagagagagttcacggagatggaggagctg
cagcagcgcaccaacgcagtctcactggagagggtcaaggcctactaccgcagactccga
gctttctatctggagaagtccaacctcccgacggactcgaactccacggcgatgaagata
gaccagatactgggccttgaagttagagacctccaaccaagcatttccaaactgctgcgc
cccctcaacacgctggacgacctctgtcgactgatgcagtcctacgtcaacgtgcgcccc
acgtcccagggtcacccgtcgggcgtcagcgtgctgtgcgtgtcctcggagctgtgcaac
cggctgggagcctgtcacatcaccatgtgcggcacaggcatgcagaggtgcactctgagc
gtcactctggagcaggccatgatcctggccaggaaccacggcctcattccccgctgcatc
atgcagaccgtggacatcatgaggaagcagggagctcgagtggagctgtctgctaagaat
ctgaaggtaatggaccagatgcctccgtcagctccaaggcttttccggctgtgtctgccg
ccgtcagacggagaactgtag
DBGET
integrated database retrieval system
