Oryzias melastigma (Indian medaka): 112159040
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Entry
112159040 CDS
T07439
Symbol
taf11
Name
(RefSeq) transcription initiation factor TFIID subunit 11
KO
K03135
transcription initiation factor TFIID subunit 11
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
112159040 (taf11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oml03021
]
112159040 (taf11)
Transcription machinery [BR:
oml03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
112159040 (taf11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAFII28
CBFD_NFYB_HMF
GMT-wHTH
Motif
Other DBs
NCBI-GeneID:
112159040
NCBI-ProteinID:
XP_024148611
Ensembl:
ENSOMEG00000005158
LinkDB
All DBs
Position
LG7:15640897..15643762
Genome browser
AA seq
203 aa
AA seq
DB search
MADPARIKSEDNIPEKAISKEEPDLEIKHEPIAKESVDEKKESSVQDPLKREVKHEAAPG
DDEEEGTSGQPPAKRLRVEPDKKKEKRHKVDEDEIQKMQVLVSSFSEEQLNRYEMYRRSA
FPKAAIKRLIQSITGSSVSQNVVIAMSGIAKVFAGEIVEEALDVCEKWGDTPPLQPKHMR
EAVRRLKSRDQIPNTKYKQILFH
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atggcagatcctgcacggataaagtcagaagataacatacctgaaaaggcaatatccaaa
gaggagccggatctagaaataaaacatgaacccatcgcaaaagaatctgtagacgaaaag
aaagagtcatccgtacaagatcctctcaaacgggaggtgaaacatgaggctgcccctgga
gatgatgaagaagagggaacctccggtcagcctcctgctaaaagactgagagtggagccg
gataagaaaaaggagaagcggcacaaagttgatgaggatgaaatacaaaagatgcaagtt
ttagtctcatctttttctgaagagcaactaaatcgctatgagatgtacagacgctctgcc
tttcccaaggctgccatcaagaggttgatccagtcaatcacaggatcgtcagtttcccag
aatgtggtcattgcaatgtctggtattgccaaggtttttgctggagaaattgtcgaggaa
gcgcttgacgtttgcgagaagtggggagacacgccgccgcttcagcccaagcatatgagg
gaagctgtgcgaaggctgaagagcagagatcagattcccaacaccaagtacaagcagatt
ctgtttcactga
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integrated database retrieval system
