Oryzias melastigma (Indian medaka): 112159092
Help
Entry
112159092 CDS
T07439
Symbol
trim33
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM33 isoform X1
KO
K08883
tripartite motif-containing protein 33 [EC:
2.3.2.27
]
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
oml01001
]
112159092 (trim33)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oml04121
]
112159092 (trim33)
Enzymes [BR:
oml01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112159092 (trim33)
Protein kinases [BR:
oml01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
112159092 (trim33)
Ubiquitin system [BR:
oml04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
112159092 (trim33)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
zf-B_box
ANCHR-like_BBOX
PHD
zf-RING_UBOX
PHD-1st_NSD
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
112159092
NCBI-ProteinID:
XP_024148712
Ensembl:
ENSOMEG00000016791
UniProt:
A0A3B3CBF2
LinkDB
All DBs
Position
LG7:25740106..25770121
Genome browser
AA seq
1177 aa
AA seq
DB search
MADNKGEEDMDPTASSEPEPPVEAESLSDSTAENAVSTTEPVFKEDADNETSGTVNEAPT
PADGGGKASSGEAAASSGEANDGVGDHVSPAEPSSTNAEPAATESPAAAAADGPATESPP
LPAAPASTPVPTPLNLLDTCAVCKQSLQNRDCEPKLLPCLHSFCLKCIPQPDRQISVQVP
GPHGQTDTHIVNVMRCSVCHQDYKQTDIIDNYFVKDTSEATSTADEKAAQVCTSCEDNAG
TIGFCVECGEWLCKTCVEAHQRVKITKDHKIRTKEDADAGSEPVSQSGQRPVFCPVHKQE
PLKLFCETCDTLTCRDCQLLEHKEHRYQFLEEAFQNHKGLIETNMAKLHEKNSYVHHSLS
QVQHRLKELNETHRKVEHEIKIAVFTLINEINKKGKSLLQQLENVTKERSLRLVAQHKDT
TQLAQQISHVLKFCNWAITSGSNTALLYSKRPIMYQLCKLFKARLEPAPQSNGVVRFFCD
PNFWAKNVVNLGNLVIEKPPPPTQPHNVMVAGPPISPGQGLPGKHPGQINLAQLRLQHMQ
HAAYAQQKQQQQQQHMQQQMRLASQMSQQHARQSGPPLVQQPPRLISMQQLQRGPGGMNG
GPGPPMYPSSHHMRLPGPPQNRIATAQPRPNGQQYSSLMQPQLQRQMSVESEMSHQRFRF
LLQSGHSNPGHAGPFPVASLHNANPTSPTSASMAGAHAHRGPASPVIGPIELIPSVTNPE
NLPCLPEIPPIQLEDAGSSNLGHILSRYITASTQLHLGSVDLNTSPGLPNLSPGSSGLSN
AHTPARPSSTSSTGSRGSCSSAGRIGAGGGASSDPVKVKKEPGSEDSYSCPASSLKTERG
KDAGRSACMMSSPETSPRGAASTGQRIKTEPETETSCSELNGLSGAATTTTSSTSTTTEN
SHSKANLLLTNGNTGKEAGPSRGGASEENHGGKEDDPNEDWCAVCINGGDLLCCDHCPKV
FHMKCHVPTIKIFPKGDFVCTFCRSLSDPEIEYCDDSKRIKGEHSLNPEDQRRCERVLLY
IFCHELSMGFREPVPSSVPNYYKIIKQPMDLKKVKKKLQLRSSQYYNSVQEFVSDMRLIF
KNCAKYNEMSRIIQVYDEEKEINTQAGSEMAISGKAVGLYFEEKLQEMFPGQNFPETPEA
EPPDEKEREEETEDSEDDFIQPRRKRLKTDEKVVHIK
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atggcggataacaaaggcgaagaggatatggatccgactgcgagctcggagccagaacct
ccagtggaagccgaaagcctctcggactcgacagcagagaacgcggtttcaacaaccgaa
ccagtttttaaggaggacgcggacaacgagacgtccggtaccgttaacgaggcaccgaca
cccgccgatggaggcgggaaagctagcagcggcgaggctgccgcctcatccggggaagcc
aacgatggcgtcggcgatcacgttagcccggccgagcccagcagcaccaatgcggagccc
gcggcgacggagtctcccgccgctgctgcagccgacggacccgccaccgagtcgcccccc
cttccggccgccccagcctccacaccggtccccactccgcttaacctgctggatacgtgc
gcggtgtgtaaacagagcctccagaaccgggactgcgagcccaaactgctgccctgccta
cactccttctgcctgaagtgtatcccgcaaccggacaggcaaatcagcgtgcaagtccca
ggcccgcacggacagaccgatacgcacatagtgaacgtcatgcgatgttccgtttgccac
caggactacaagcaaaccgacatcatagacaactactttgttaaagacaccagcgaagcc
accagcacagctgatgaaaaagctgcacaggtttgcacaagttgtgaagacaatgcagga
acaataggcttttgtgtggagtgtggcgagtggctgtgtaagacctgtgtggaggcccac
cagagagtcaagatcaccaaggaccacaagatccgcacaaaggaggacgctgatgccggt
tctgaacctgtcagccaatcaggacagagaccggtcttctgtccggtccacaaacaggag
ccgctcaaacttttctgtgagacgtgtgacacgctgacctgcagagactgccagctgctg
gagcacaaagagcacaggtaccagtttctggaagaagcctttcagaaccacaaaggtctc
attgagaccaacatggccaagctccatgaaaagaacagctatgtccaccattctttgtct
caggtgcagcacaggttaaaggagttgaatgaaacacacaggaaggtggagcatgagatc
aaaattgcagtttttactcttattaatgaaatcaacaaaaagggcaagtctctgttgcag
cagctggagaatgtgaccaaagagcggagcttgaggcttgtggctcagcataaagacact
acccaattagcccagcagatcagccatgttctcaagttctgcaactgggccatcacgtca
ggcagcaacacggcgctgctgtacagcaagaggccgatcatgtaccagctgtgtaagctc
ttcaaggcccgactggaaccggccccccagtccaacggggtggtgcgcttcttctgtgac
cccaacttctgggccaaaaacgtggtgaatttaggtaatctggtcattgagaagcccccc
ccaccgacacagcctcacaatgtgatggtagcaggaccccccatctctccgggccagggt
ctccccggcaaacatccgggtcagatcaacctggctcagctgcggctgcagcacatgcag
cacgcagcctacgcgcagcagaagcagcagcagcagcagcagcacatgcagcagcaaatg
cgactggcttctcaaatgtcccagcagcacgcccggcagagcgggccccccctggtccag
cagcccccacggctcatcagcatgcagcagcttcagagaggaccagggggcatgaacggg
gggcctggcccccccatgtacccttcctctcatcacatgcgcctgcccgggcccccccag
aaccggatagccacggctcagcccagacccaacggtcagcagtattcctccctgatgcag
cctcagttacagagacagatgtctgtagaatctgagatgagccaccaaaggtttcgtttc
ttacttcaatcagggcattccaacccaggacatgcagggccgttccctgttgcatctttg
cataatgccaaccccaccagtcctaccagtgccagtatggcgggagcccacgctcaccgc
ggacccgccagcccggtcatcggtcccatcgagctgatcccctccgtcaccaacccagaa
aaccttccctgccttccagagatcccaccgattcagctggaagatgcaggttccagcaac
ctgggacatattctatctcggtacatcacagcgagcacacagctccacctgggctccgtg
gacctgaacacatctccgggattacccaatctgtctcctggatcctcaggtttgtccaat
gctcacacgccagcacggccctccagcacatccagcacaggaagcaggggcagctgtagt
tctgcggggaggatcggagcaggaggcggagcaagttcagatccggtcaaagtgaagaag
gagccgggttcggaggacagctacagctgcccggcgtcctctctgaagacggagcggggc
aaagacgctggcaggagtgcctgcatgatgagcagtccagagaccagcccgcggggggcc
gcgtccaccggccagcggatcaaaaccgagccggagacggagacatcgtgttctgaactg
aacggtctcagtggcgctgccaccaccacaaccagctctacctcaaccaccacggagaac
agccacagcaaggccaacctcctgctcaccaatggaaacacaggcaaggaggcggggccc
agcaggggcggagcatccgaggagaaccacggaggcaaagaggacgatcccaacgaagac
tggtgcgccgtctgcatcaacgggggtgacctcctctgctgtgaccactgtcccaaagtg
ttccacatgaaatgtcacgtccccaccatcaaaatcttccctaagggggactttgtctgt
actttctgccggagtctgagtgatcctgaaattgagtactgtgacgacagcaagagaatc
aaaggagagcacagcctgaaccccgaagaccaaaggagatgtgagcgcgtcctgctgtac
atcttctgtcacgagctcagcatgggcttcagggaacctgttcccagctctgtgcccaac
tactacaagatcattaagcagcccatggacctgaagaaggtgaagaagaagctgcagtta
cggagctcccagtactacaattctgtccaggagtttgtgtcggacatgcgccttatcttc
aaaaactgtgcaaagtacaatgagatgtctcgaataatccaggtttatgatgaggagaaa
gagattaatacacaggccggatcggagatggccatttccgggaaggcggtgggcctgtac
tttgaagagaagttgcaggagatgtttccaggccagaacttccccgaaaccccagaagcc
gagcctccggatgagaaggagcgggaggaggaaacggaggactcagaggacgacttcata
cagccgcgacgcaaacggttgaaaacggacgagaaggtcgtccacatcaaatag
DBGET
integrated database retrieval system
