Oryzias melastigma (Indian medaka): 112159114
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Entry
112159114 CDS
T07439
Name
(RefSeq) poly(rC)-binding protein 4
KO
K21444
poly(rC)-binding protein 3/4
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oml03019
]
112159114
Messenger RNA biogenesis [BR:
oml03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
112159114
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
KH_Vigilin
MOEP19
Motif
Other DBs
NCBI-GeneID:
112159114
NCBI-ProteinID:
XP_024148747
Ensembl:
ENSOMEG00000011545
LinkDB
All DBs
Position
LG7:12363399..12418592
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AA seq
457 aa
AA seq
DB search
MRLPAFHSHITMNCEQDFGDGGLGVTLTLRLLMHGKEVGSIIGKKGETVKRIREESSARV
NISEGSCPERIITITGSTDSVFRAFTMITYKLEEDLTALVANGTISSKPPVTLRLVIPAS
QCGSLIGKGGAKIKEIRESTGAQIQVAGDLLPNSTERGVTISGNQDSVIQCVKLICTVIL
ESPPKGATIPYRPTPSPAALLIAGNQVFEASDFAPHPLYSVTQGGLDLQQAYTLQNQYGI
PHSELAKLHQLSVQQGLSPIAQPASTIMPGMDSTSQTSQELLIPNDLIGSIIGRQGTKIN
EIRQVSGAQIKIGSQLDGTSDRHVTITGTPVSINLAQYLITSCLETAKSTAQAATMSSPV
DLNMAFTQPASPAASPAPTLTTVGALTPAHVLGTPYGAMPLSGLLGVKSVPFLTLSSPAP
TVAVTAAPSHSTLAAYTAKISSANCIKKPERQKFAPY
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctccctgcgttccactcccacatcactatgaactgtgagcaggacttcggagat
gggggcttgggagtgaccctcactctacgactgctcatgcatggaaaggaggttgggagc
atcataggaaagaaaggagagactgtgaaacgaatacgagaagagagcagcgcacgtgtc
aacatctcagagggttcctgtccagagaggatcatcaccatcactggttcaacagacagc
gtgttcagagccttcaccatgatcacatacaaactggaagaggatctaactgcgttggtg
gccaatgggaccatcagctccaaaccaccagtcactcttcgtctggtcatccctgccagc
caatgtggctctctcatcgggaagggcggcgcaaagataaaagagatcagagaaagcacc
ggagctcagatccaggtggcgggggatttgcttcccaactccactgagcgaggggtgacg
atatcggggaaccaagactctgtaatccagtgtgtcaaactcatctgcactgtaatcctg
gagtctccaccaaaaggcgccacgatcccctatcggccgaccccgtcacctgctgccctt
ctcattgcagggaaccaggtttttgaggcatcggattttgcaccacaccctctgtactca
gtcacccagggtggcctggacctccagcaggcatacactttgcaaaaccaatatggcatt
ccacactcagagctggccaagctgcatcagctgtcagtgcagcaaggcctgagtcccatt
gcccagccagcctccacaatcatgcctggaatggactcaacctcgcagacgtctcaggag
ctgctaattcccaatgatttgattggctcaatcatcggccgtcagggcacgaagatcaac
gagatccggcaagtgtcaggagctcagatcaagattggtagccagctggacgggacaagc
gaccgccacgtcaccatcaccggaacaccagtcagcatcaacctggcccagtacctcatc
acctcttgcttagagacggccaagtccaccgcccaggcagccaccatgtcatctccagtc
gaccttaacatggccttcactcagccggcctccccagcagcctcccctgcacctaccctg
accaccgtgggcgccctgaccccagctcatgtgctcggcaccccttatggcgccatgccc
ctctccgggttgctcggggtgaaatccgtcccctttctgactctgtccagccccgccccc
actgtggctgtcactgcagcaccctcccactccactcttgccgcatacacggccaaaatc
tcctcagccaactgcattaaaaagccggagagacagaagtttgctccgtattga
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