Oryzias melastigma (Indian medaka): 112159124
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Entry
112159124 CDS
T07439
Symbol
brpf3b
Name
(RefSeq) bromodomain and PHD finger-containing protein 3 isoform X1
KO
K11350
bromodomain and PHD finger-containing protein 3
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oml03036
]
112159124 (brpf3b)
Chromosome and associated proteins [BR:
oml03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
MOZ/MORF complex
112159124 (brpf3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-HC5HC2H_2
EPL1
Bromodomain
zf-HC5HC2H
PWWP
PHD_2
PHD
PHD_NSD
Motif
Other DBs
NCBI-GeneID:
112159124
NCBI-ProteinID:
XP_024148770
Ensembl:
ENSOMEG00000016628
LinkDB
All DBs
Position
LG7:complement(25788396..25805893)
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AA seq
1230 aa
AA seq
DB search
MRKPRQKGQVGPGGEADVRSNGAIAGRGAGRQRSPSPYSLKASPTRETLSYAQAQKVVEV
ELDGRLHRISVVEPLEVITEDEMMAQDISECNSNKENSEQSSSPTSSAQTPRKRIIPRGR
KKDSKCFSIRSTQPSKNHCPGARPLSSEKLNSSHGNHVTLPEPKFSVQETFTPVEAPPLP
AAYYRYIEPSSEEHEGKAEYDMDEEDTAWLEMVNAGRTSDGSSAVSPDTFELLIDQLEEE
AYREARSRAPSQSSIDDDAFCCVCLDDECLNSNVILFCDSCNLAVHQECYGVPYIPEGQW
LCRCCLQSPQKPVDCVLCPNRGGAFKQTSDGRWAHVVCAIWIPEVCFANTVFLEPVEGVS
NIPPARWKLTCYLCKQKGRGASIQCHKANCYTAFHVTCAQRAGLFMKIEPVRETNVNGTT
FSVKKTAFCEAHSPPGQDAGSDEETEGRVVGSRGRASRGQSAYTVGPVTPKKGRKPEEDD
KSDKKKGKKAEEASPKHTGSLQVAIPQIPTSRLNSICKGIFLQRKSQFLQRLYNYWRLKR
QSRNGVPLVRRLHSNVHSQRNTEQPEVDERLSAAREALRYWQKLRHDLEKARLLVELIRK
REKLKREQVKVQQAALEMQLTPMLMLLRSTLDQLQEKDTAHIFGQPVCIKEVPDYLEFIS
HPMDFSTMRSKLESHFYRSVSDLEADFNLMVSNCLLYNASDTVFHRAALHLRDLGGAVLR
HAQRQATNIGLDLDSGMHLAESPQKRDFYSCTWEDVDSVLDPNNRLHMSVEDQLKELLEK
LDFVTSMRCSGARTRRMRLLRREINSIRYRQGQPPRHSLLNGHLKEEEEEDEDDGDEKAA
KTENSRLSSDKEDLKSTSPPTLEPTGPAPPPRRGDTLLEPPTLRPITAEPPGWPCKRLKM
DGDVSSGPSDSIEDQERSTAPHLHGQEVSNGLTAHNPPPCHSTGGVGRRTSVLFKKAKNG
AKLFRERDRTLWNGKGAQEEHNFTGPNSSSTTPSTTPLSTPTKTPQKSPGPPLLSTQDLC
SDPELQRMQTLESGLTNGFSVVDGSDSASCPVLHKETSSPPKRSLGKPALSKVPLFEMLN
GDSDYSGAGSQTPERDMELEPLELVWAKCRGYPSYPALIIDPDMPQEGLLHNGVPIPVPP
KDVLHLGEQRQEDANEKLYLVLFFDNKRTWQWLPRDKMTPLGVDDTADKLRIMEGRKSSI
RKSVQVAYDRAMIHMSRVSHSHCFVAPNFF
NT seq
3693 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaaccacgtcagaaaggccaggtgggcccaggaggtgaagcagatgttaggtcc
aatggagcgattgctgggagaggggctggccgccagcgatccccttctccttatagcctt
aaagcctctcccacccgagagactctttcttatgctcaggctcagaaagtggtggaggtg
gaattggacggaaggctccaccgtatttccgtcgtggagcctttggaggtcatcacggag
gatgaaatgatggctcaggacatcagtgagtgcaacagcaacaaagagaacagcgagcag
tcatcatcccccaccagcagtgcccaaacaccccgcaaacgcatcataccaagaggtcga
aagaaagactccaaatgtttctccatcaggtcaacacagccctccaagaaccactgcccc
ggtgctcggccactgtcttcagaaaagctaaattcatcacacggtaaccatgtgactctc
ccagaacctaagttcagcgtccaggagacattcacgcctgtcgaagctcctcctctacca
gcagcatactaccgttacatcgaaccctccagtgaggagcatgaaggaaaggcagaatat
gacatggatgaggaagacaccgcctggctggagatggtcaatgctggccggacatccgac
ggttcctcggctgtctccccggacacctttgagcttctgatagatcagctggaggaagaa
gcgtaccgtgaagcccgcagccgggcgccatctcagagctctattgatgacgatgccttc
tgctgtgtgtgcctggacgatgaatgtctcaacagtaatgtcattctcttctgtgactcc
tgtaacctggctgtgcaccaggagtgttatggggtcccctacatccccgagggccagtgg
ctgtgccgctgctgtctgcagtctcctcagaaaccagttgactgtgttttgtgtccaaat
cgcggcggcgcctttaagcaaaccagcgatggtcgatgggcacacgtggtctgtgctata
tggatacctgaggtctgttttgccaacacggtatttctggagccagtagaaggagtgagt
aatattcccccagcgcgctggaaactgacctgttacctgtgcaagcagaaaggccgcggc
gcatctattcagtgtcacaaggccaactgctacacagcgtttcacgtgacgtgtgctcag
cgcgctggcttgttcatgaagatcgagccggtgagagaaacaaacgtcaacggaacgaca
ttctctgtgaagaagacggcgttctgcgaggcccattccccgccggggcaggacgcaggg
tcagacgaagagacggaaggacgggtggtggggagccgagggagggctagtagaggacag
agcgcctacacagtcggtccagtcacaccaaaaaaaggcagaaagccagaagaggatgac
aagagtgataaaaagaaagggaagaaggctgaagaagcatcgcccaaacacacgggctca
ttacaagttgcaattcctcagatacccaccagcaggttgaatagcatttgcaaaggaatc
ttcctccaaaggaaaagccagttcttacagaggttgtacaactactggcgactgaagcgc
cagtccagaaacggcgttccgctggtccggcgtctgcactcgaacgtccattcccaaagg
aatacagagcagcctgaagtggatgaaaggctttctgctgcacgagaagctctgagatat
tggcagaagctgcggcatgatctggagaaggcgcggctgctggtggagctgatccgcaag
agagagaaactcaaacgagagcaggtcaaagttcaacaggcggctctggagatgcagttg
accccaatgctcatgctgcttcgctcaactctggaccaacttcaagagaaggacacggcc
cacatttttggccagccagtttgtataaaagaagttcctgactacctggagtttatcagc
catcccatggacttctccaccatgcgctccaagcttgaaagccatttctaccgctcagtg
tccgacctggaggcagacttcaacctcatggtgtccaactgcctcctctacaatgccagt
gacaccgtcttccacagagccgcactacatctccgggacttagggggcgccgttttgcgt
catgcccaacgacaagccacaaacattggcctggatttggacagtggcatgcacctcgca
gagtctccccagaagagagacttctacagctgcacctgggaggacgtcgacagtgtgctg
gatcccaataaccggctccacatgagcgtggaagaccagctgaaggagctcctggagaag
ctggactttgtcacctccatgcgctgcagcggcgcccgaacccgccgcatgcgcctcctc
cgtcgggagatcaacagtattcgctataggcagggccagcccccccgccacagcctcctc
aatgggcatcttaaggaagaggaggaggaggatgaagacgacggtgatgaaaaagcggca
aagacggagaacagccgtttgtcctccgacaaagaagacctcaaatccacttccccccca
acactggaaccaacaggcccggctcctcctccgcgacggggggacacacttctggagcct
cccacgctgcggcccatcacagcggagccccccggttggccctgcaagcggctgaagatg
gacggcgatgtgtcaagcggcccctctgacagcattgaggaccaggaacggtctacagcg
ccacatttgcacggtcaggaggtgtccaacggcctgacggcacacaatcctccaccgtgt
cattccaccgggggcgtggggcgccggacttctgtgttatttaagaaagcaaaaaatggt
gccaagctcttccgagaaagagacaggactttatggaatgggaaaggagcacaggaggaa
cacaacttcacaggacccaactcctcctcaacaaccccctccactactcctctgtccacc
ccgaccaagaccccgcagaaaagcccaggaccccctctcctgtccacacaagacctgtgc
tcagatcctgagctgcagaggatgcagacgctggaaagtggactaacaaatggcttcagc
gttgtggacgggtctgactccgcgtcctgtccagttctgcacaaagaaaccagctctccc
cccaaacgaagccttggaaaaccggctctttccaaagttcctctctttgagatgctaaat
ggagattccgattactctggagccggcagccaaacaccggagcgggacatggagctggag
cctctggagctggtgtgggccaaatgccgcggatacccatcatacccggcgctgattatt
gatccagacatgccacaagagggcctactgcacaatggagttcccatacctgtcccaccc
aaggacgtcctgcacctgggggagcagagacaggaggacgccaatgaaaaactctacctg
gttcttttttttgacaacaagcggacatggcagtggcttccccgggacaagatgacccct
ctgggcgtggatgacacggctgacaagctgcgcattatggagggtcgcaagtccagcatc
cgcaagtccgtgcaggtggcgtacgaccgggccatgatccacatgagccgagtcagccac
agccactgctttgtggcccccaacttcttttaa
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integrated database retrieval system
