Oryzias melastigma (Indian medaka): 112159126
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Entry
112159126 CDS
T07439
Symbol
nr1h5
Name
(RefSeq) nuclear receptor subfamily 1, group H, member 5 isoform X2
KO
K08538
farnesoid X receptor beta
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oml03000
]
112159126 (nr1h5)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
oml03310
]
112159126 (nr1h5)
Transcription factors [BR:
oml03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
112159126 (nr1h5)
Nuclear receptors [BR:
oml03310
]
1. Thyroid hormone like
1H. Liver X receptor like receptor
112159126 (nr1h5)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
112159126
NCBI-ProteinID:
XP_024148779
Ensembl:
ENSOMEG00000016653
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Position
LG7:25781136..25788342
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AA seq
481 aa
AA seq
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MREWSEADMSFSAGGVLSSSDSYCSSEQLQYYDLLADPLGCPLQDPDLQLLPFSQQQHLP
ANLPLSLYSAPPSSTSSQLCHPSYQCGAVCLEGPCQPGPDPLCGGPVQGCGSVELPLGRR
SRLGIGGKSRGQDELCVVCGDKASGYHYNALTCEGCKGFFRRSVTKKAVYRCKSGGSCEM
DMYMRRKCQDCRLRKCRAVGMLAECLLTEVQCQSKRLRKGMKDRGLEEDDSTGTRSLTPT
ARLPGQAPPTSLSREQRYLVDRMVEAQRSCKDQGGSSWMISEWAWSENGGGLPAAVSPQL
QKLLQFARTVPGFDLLDFSEQHALLSASWLEVVFLLSAQQFSLNPLSPSPALQLFSVSAQ
SWFRHAEVKDHMVGRVLMSSGSSEDLLRPVLGFLRSMAALQVTEAEYALLTATALLCSDR
ASLRAAGRVEKMQELILDLLSRLCGGQAQGGPQRFGRLLGRLTELQTLHHNYLILIRGQH
G
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgagagagtggagcgaggccgacatgagcttctcagcaggaggagtcctctccagctcg
gacagttactgctcctcggagcagctccagtactacgatctgctagccgatccgcttggc
tgtcccctgcaggacccggacctccagctgctcccgttcagccagcagcagcacctccct
gcaaacctgcccctttccttgtacagcgctccgccctcctccacctcctcccagctctgc
cacccttcataccagtgtggcgccgtctgtctggaggggccctgccagccaggcccggat
cccctctgcgggggcccggttcagggctgtggatccgtggagctgccccttgggcggagg
tcccgcctgggaatagggggcaagagcagaggccaggatgagctgtgtgtggtttgtggg
gacaaagcgtcggggtatcactacaacgccctcacctgtgagggctgtaaaggtttcttc
cggcgcagtgtgaccaaaaaggcagtgtaccgctgtaagagtggcggcagctgtgagatg
gacatgtacatgaggaggaagtgccaggactgccggctccggaagtgccgcgcggtggga
atgctggcggagtgcctccttacggaagtgcagtgccagtccaagcgcctgaggaagggg
atgaaggatcgaggactggaggaagacgacagcacaggaaccaggagcctgacacccacc
gccagactacctggacaggctccgcccaccagcctgagcagagagcagaggtatttggtg
gacaggatggtggaggcgcagcgctcctgcaaggatcagggaggcagcagctggatgatt
tctgagtgggcgtggtcagagaacggggggggcctgcctgctgcggtgtcgccacaacta
caaaagctgctgcagtttgccaggacggtgccaggctttgacctcctggatttctcggag
cagcacgctcttttgtccgcttcctggctggaggtggtgtttctgctgtcagcgcagcag
ttctccctcaacccgttaagccccagtccagctctgcagctcttcagcgtgtcggcacag
agctggttcagacacgcagaggtgaaggaccacatggtggggagggtgctgatgtcctca
ggaagcagtgaggatctcctccgcccagtgcttggcttcctgcgtagcatggcggcgctg
caggtcacggaggcggagtacgcactgctcaccgccacagcgctgctatgctcagaccga
gcgtctctgcgggcggccggtcgtgtggagaagatgcaggagctgatcctggacctgctg
tccaggctgtgtgggggccaggcccagggggggccgcagcgcttcggccgcctgctgggc
cggctgacggagctgcagactcttcatcacaactacctcattctgataagaggccaacac
ggatga
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