Oryzias melastigma (Indian medaka): 112159130
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Entry
112159130 CDS
T07439
Symbol
mbd6
Name
(RefSeq) methyl-CpG-binding domain protein 5
KO
K26585
methyl-CpG-binding domain protein 6
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
112159130 (mbd6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oml03036
]
112159130 (mbd6)
Chromosome and associated proteins [BR:
oml03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
112159130 (mbd6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBD
Motif
Other DBs
NCBI-GeneID:
112159130
NCBI-ProteinID:
XP_024148784
Ensembl:
ENSOMEG00000005544
UniProt:
A0A3B3BGH7
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All DBs
Position
LG7:3571347..3589385
Genome browser
AA seq
1661 aa
AA seq
DB search
MMGGSETVSGDKDGVHTAAIHVPIGWQRREEGGKVIYVSPSGAALSTLEEVKAYLLTDGT
CKCGLECPLILNKVFNFSVDVKVEHRSQPLGKPEQDMTKLCNHRRKVVAMAALCRSMQGS
QHPFANFHHPDVGQVDSRDPKPEPAERKEDDHGSFLQKLHPVSARLHNNLHPNPCASPKS
PHHFIYPYNGSPSVLHTGTNSHHSLDPRKLHHSALPTSSTSSSSSSFIAHSSVPRSPCTP
TPQKVSQGQRTPKTPDTPSSPRVGPLSSPPPSSPIALSGSVRGAQNHNHHPHVVIVGAPP
LSPSTPLSPSVHSLSASPHQRSRHPSASPSSLCGQGGGPTAPEGGELTGSSLRQRRKSTS
SSPRSPVPSGSPNPSPHFPKYKLEDILEQFKNSGSNSTNNHHPLSISNPSLLTTLSSNNP
HVVSSKPLKTIMLPTASAGTPGFGGNSPVPSSVPLGPLLNHHYSHQGKLPRPASFPASSL
LSAAAKAQLANQITQGQSLNAVAPPGSLSSLDVLKETPQQQKVTNSTLHNSHSPCIASAR
LSHSLAAASAALFPPSHSLAQSLASTLPHLPPTAEQNTSYRKRQRRSPTVLNMLKDTQAL
PNGSRRTPPEDAVSAAVINLSSSSSFPSSLHSSSTSALQNQGSASLDNQNAPGQTARLHS
SRHKAHLSRTTRPSEALDFTTSLTPSPLSLDPPTQPLSALLHLLSLQNAQTTASAASSAL
AQSRIAFVEGGGHTNKQSPKRSPSSPAPSASTRLPQPQSPCRRDNTNPISLVQQPLSSPP
TSPHFTPSQSPAQSNKSSPPQKHSPSAVLPKSNLAFQSSSSTQQMTSSPTDKQQSTDNHI
PTTDSVSQASSQVPSPQGAVAADSGSNSTATSVDLSQRQGSALPPIPSSPKPLDLSNHVL
AFLAASSTVTQGNSNPSNDTTNVRMSSPENQTARSDEDGFLDPKSSTMTKRSAASSPTSA
VLSHHEDSHSPPTPSAVCESVAALPLAEAFPFMNQEQLLQLLSSTGGLPSVLDPALLALL
PLGGLWMGGQNAQTPPASVTPQQNLAEQQQPEEQQLLMQDAQQDQQQKQQINSNPLFPLL
PLLSGTQGELPLNLMGLQNFMSASAPSAGQDLDLSEKNSLQALFMASLLLGQQQPSLLPL
SALGQMSQVSLEVPIQHSQQIPTTLDGLALDKTSGLLEPSSLTGPGLLELTQGLLPITAG
AEGPIQALQSLLLPATLPPPPAAFLPFNPALLTAALSSPELHPPPNTQLAPAQQTQHTPP
QVTSESSVDTLIPVALQGKDNAILQQLLPTLLNPALLGDVSGITGLPNMVGMEAGSILLS
PVQASALGMSLLQGPDGAINLLNSIQLNLAPPSDGEKSDLLQETQSPVPQEDIPASEVAP
EATPSPAPVLTPSPAPESTPLPHKRSEGKPAIDPYTSFMDTIYTSFLQVSAKEQEEGGQL
RPTDPTSPFCALPPVSFPVEHHFPSTTVSTFPQASSPATLSPRRACSLRNPDLSRLNLEA
TAHSPAQGTPKPTEDGPTSPLQRKPAMEGHVHQEPPLPPIYLEEAKTDCTATTGAVCPFV
EAGVDQQGHLPHKGYLSPRDGNSERPGQDTTETVLDSGQGVDQAGGARRGRKRKQTLQNV
LEDFRDMDATALEEIKAATVLLKPERSVRGRRRRGARSLRQ
NT seq
4986 nt
NT seq
+upstream
nt +downstream
nt
atgatgggaggcagtgagactgtcagcggggacaaggatggggtccacaccgctgcaata
catgtccccattggctggcagaggagggaggaaggggggaaggtgatctatgtcagtccc
agtggagctgccctttccactctagaggaggtcaaggcctatctgttgactgatggtacc
tgcaaatgtggtctggaatgtccacttatactcaataaggttttcaacttcagtgtggat
gtgaaggtggaacatcgcagtcagcctttaggtaaaccagagcaggatatgaccaaactg
tgcaatcatcgaaggaaagtggtggcgatggccgctctgtgtcggagcatgcaaggctca
cagcatccatttgccaactttcatcatccagatgtgggtcaagtggacagcagagatcca
aaaccagaacctgcagaaaggaaagaagacgatcatggaagttttcttcaaaagctccat
ccagtctcagcccgacttcacaacaacctccacccgaatccctgtgccagcccaaagtcc
ccccaccactttatctatccctacaatggctccccctctgtgcttcatacaggcaccaac
tcccatcattctctagatcctagaaaactccaccactctgctctcccgacatcctccacc
tcttcatccagctcctcatttatagctcatagctccgttccaaggtcgccgtgcaccccc
acgcctcagaaagtcagtcaaggtcaacgaacacccaaaacccctgataccccgagctct
ccccgagtaggacccctgtcatcacctccaccctcttctcctatagctcttagtggaagt
gtaagaggagcacagaatcataatcatcacccccatgttgtgattgtgggagcccctcct
ctttctccttccactcccctttctccgtctgttcacagtttgagcgcgtcccctcaccag
cgatctcgccacccttcagcctctccttcctctctgtgcgggcagggagggggcccgaca
gctccagagggaggggagctgacgggaagcagcttgcgtcagaggaggaaatctacctcc
tcctccccacggtctcctgtccccagtggatccccaaaccccagcccccatttccccaag
tacaaacttgaagacattttggagcaatttaaaaactcaggcagcaacagcactaataat
caccaccctctcagcatttcaaatccctccctactgaccactctcagcagtaataacccc
catgtagtctcctccaagcccttgaagactatcatgcttccaactgccagcgcaggaact
ccagggtttggtgggaactctccggtgccctctagtgtacctcttgggccattactgaat
caccattatagccatcaaggcaagctgccacgcccggcctctttcccggccagcagttta
ctctctgccgctgccaaggctcagctcgctaaccagataacccagggccagagtttaaat
gcagttgcccccccagggagcttgtcttctctggatgtcttgaaagagacaccacagcaa
caaaaggtaactaacagcactttacataacagccactctccttgcattgcttctgctagg
ctttcccattccctcgctgcagcttctgctgctctctttcccccctcccactctctggcc
cagtccctggcttccactttgcctcacctgccccccacagcagaacaaaatacttcttac
aggaagaggcaacggcggtcccccactgtcctcaacatgcttaaagacacacaggccttg
cctaatggatcacggagaactccaccagaagatgctgtctctgctgcagttatcaacctt
tcctcctcctcctcctttccctcctccttgcactcctcctctacctcagcactgcagaac
cagggttctgcatcgttggataaccagaacgcccccgggcagacggccagactccactca
tcgcggcacaaggcacacctatccaggaccactcggccaagcgaggctctggatttcact
acaagcctgacaccttcacccctaagcttagatcctccaacccagcctttgtctgctctg
ttgcatctgttaagtctgcaaaatgcacaaaccactgcctcagctgccagctctgcttta
gctcagtccagaattgcgttcgttgaaggaggtggacacactaataaacagagccccaaa
cggtcaccgtcttctccagctccttctgccagcaccagactcccacagccgcagtctcca
tgccgtagagataacactaatcccatatccttggtgcagcagccactttcgtccccacct
acatctccacatttcactccatcacagtctccggctcagtctaataaatcgagtcctcca
caaaagcattccccctcagcagtgcttccgaagtcaaatttagctttccaaagcagtagc
tcaacccagcagatgacctcgtcaccgacagacaagcaacaatcgactgataatcacatt
ccaacaacagactctgtgtcccaggcctcgtcacaggtaccctcgccacagggggccgtg
gcagcagacagtgggagcaacagcacagccacgtcagtggacctgagtcagcgtcaaggc
agcgctctgccgccgatcccttcctctccaaagcctcttgatcttagcaaccatgtctta
gcctttcttgctgcatcctccactgtgacacaggggaacagcaacccctccaacgacacg
actaacgttcggatgtcttccccagaaaaccagactgcaagatcggatgaggatggattt
ttagacccaaagtcctctacaatgaccaaacgttcagcagcttctagtcccacgtctgcc
gtcttgtcacaccatgaagacagccacagtcctcctaccccttcagccgtgtgtgaatct
gttgctgccttgcctctggcggaagccttccctttcatgaaccaggagcagctgcttcag
ctactgtcttctactggaggtctaccatctgttttggaccctgcactcttggctttgttg
cccctgggtgggctgtggatgggagggcaaaatgcacagacacctcctgcctccgttaca
ccgcagcagaatctcgcagagcagcagcaaccagaggagcagcagttattaatgcaagat
gcacaacaagatcagcaacaaaagcaacagattaacagcaatcctctgtttcccttgttg
cccttgttgagtggcacccaaggggagctgccactaaacctgatgggcctgcagaatttt
atgtcagcctcagccccttcagctgggcaggatctggatttatctgagaaaaacagtctt
caggcgctgtttatggcatctctgctacttggacaacagcagccgtctttgttacctctc
tctgcgttgggtcaaatgagtcaggtcagcttggaagttcctattcagcattcacaacag
atccctaccaccttggatggccttgctctggataagacctcaggccttctggagccatcc
tctctgacaggcccggggctcctggaactcacccagggacttcttcccatcactgcagga
gctgagggtcctattcaagccctacagtctctgctccttcctgccactcttcctcctccc
cccgcagccttcctgcccttcaaccctgccttgctcactgctgccctgagctctcctgag
ctccaccctcctccaaacacccagttagctcctgcacagcaaacccagcacaccccacct
caggtaaccagtgagagcagtgttgacaccctcattccagttgctctccaaggcaaggac
aacgccatcctccagcagttactgcctactttgctaaatcctgctctactaggagatgtt
tctggtatcactggcctcccaaacatggttgggatggaagcgggctcaattcttctgtcc
cctgttcaagcttctgctttaggcatgtctctactccaaggtcccgatggagccatcaat
ctgctcaacagtatacagcttaatcttgcaccaccttctgatggagaaaagtcagattta
ttgcaggaaacccagagccctgttcctcaagaagacataccagctagtgaagttgctcca
gaggccactccaagtcctgctccagttctaactccatctcctgccccagaatcaactcca
ctccctcacaaaagatcagagggcaagcctgccatcgacccctacacttctttcatggac
accatttatacctctttccttcaagtcagtgcaaaagaacaggaagaaggtggccagctg
aggccaactgacccaacttcccccttctgtgccttaccgccggtttccttccctgtcgaa
caccatttcccctcaaccaccgtctcaactttccctcaggcaagttccccagccaccctt
agcccacgccgggcttgttctctacgcaatccagacttgtcacgactcaacttggaagca
acagcacattccccagcccaagggacacccaagcccacagaggacgggccgacatcaccc
ttacagaggaagccagctatggagggtcacgtccaccaagaacctcctttgccacctata
tacctggaggaagccaagacggactgcaccgcgactaccggggcggtttgtccctttgtg
gaggcgggggtagatcagcaggggcacctccctcataaaggatacctcagccccagagat
ggaaacagcgagaggcctggtcaggacacaactgaaaccgtgctggacagcggacaggga
gtggatcaagcaggaggagccagaagaggaaggaaaaggaagcaaacgctacagaatgtt
ttggaagacttcagagacatggatgctacagcacttgaagaaatcaaggccgcaactgta
ctcctgaagcctgagaggtcggtgcgggggaggcggcgacgaggcgccaggtctctgagg
cagtga
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integrated database retrieval system
