Oryzias melastigma (Indian medaka): 112159178
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Entry
112159178 CDS
T07439
Symbol
uba1
Name
(RefSeq) ubiquitin-like modifier-activating enzyme 1
KO
K03178
ubiquitin-activating enzyme E1 [EC:
6.2.1.45
]
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
112159178 (uba1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oml04121
]
112159178 (uba1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oml04147
]
112159178 (uba1)
Enzymes [BR:
oml01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.45 E1 ubiquitin-activating enzyme
112159178 (uba1)
Ubiquitin system [BR:
oml04121
]
Ubiquitin-activating enzymes (E1)
Ubiquitin activating enzyme
112159178 (uba1)
Exosome [BR:
oml04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
112159178 (uba1)
Exosomal proteins of other body fluids (saliva and urine)
112159178 (uba1)
Exosomal proteins of colorectal cancer cells
112159178 (uba1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA_E1_SCCH
ThiF
E1_UFD
E1_FCCH
E1_4HB
Motif
Other DBs
NCBI-GeneID:
112159178
NCBI-ProteinID:
XP_036068630
Ensembl:
ENSOMEG00000014443
LinkDB
All DBs
Position
LG7:9943481..9956680
Genome browser
AA seq
1057 aa
AA seq
DB search
MSSSPLSKKRRLSGTETKTGSHCSSSNSVRTDLSHTPANGMAKNGNDAEIDEGLYSRQLY
VLGHEAMKRMQNSNVLISGMRGLGVEIAKNVILGGVRSVTVHDQGVAEWRDLSSQFYLRE
ADLGKNRAEVSQPRLAELNSYVPVSAYTGALTEDYLTKFQVVVLTNSTLDEQKQLGDFCH
SKGIKIITADTRGLFGQLFCDFGDEMIVYDTNGEQPLSAMISMITKDSSGVVTCLDEARH
GFESGDYVTFTEVQGMVELNGCQPVEIKVLGPYTFSICDTTGFSDYVRGGIVSQVKMPKK
IGFKSISSSMAEPEFVLTDFAKFDRPGQLHVGFQAIHAFQKKHNRLPAPWSMADGEELLN
LAKEVNSAQTGSAKVEELDEDLIKKVSFLAAGDLSPINAFIGGVAAQEVMKACTGKFMPV
MQWLYFDALECLSEDAGVQLTEEECAPRNSRYDGQIAVFGTKLQDLLARQRYFLVGAGAI
GCELLKNFAMIGLASGEGEVIVTDMDTIEKSNLNRQFLFRPSDVTKMKSDTAAAAVKKMN
PSIRITGHQNRVGPETERVYDDDFFESLDGVANALDNVDARMYMDRRCVYYRKPLLESGT
LGTKGNVQVVIPFLTESYSSSQDPPEKSIPICTLKNFPNAIEHTLQWARDEFEGLFKQPP
ENAMQYLTDPKFMERTLKLPGAQPLEVLDAVYKCVVTDCPHSWADCVAWARNHWQCQYSN
NIRQLLHNFPPEQLTSSGAPFWSGPKRCPHPLEFSTSNDLHMDYVLAAANLFAQMYGLPG
STDRAGLVKILQEVKVPTFTPRSGVKIHVSDQELQTSNSSVDDSKLEELKTKLPSPESFQ
YKLNPVEFEKDDDTNFHMDFIVAASNLRAENYDIPPADRHKSKLIAGKIIPAIATTTAAV
VGLVCLELIKVVQGHKKLETYKNGFMNLALPFFAYSEPIAAPKHKYYETEWSLWDRFEVT
GMQPNGEEMTLRQFLDYFKNEHQLEITMLSQGVSMLYSFFMPSAKLKERLELPMTEIVTK
VSKKKLGKHVKALVFELCCNDTSDEDVEVPYVRYTIR
NT seq
3174 nt
NT seq
+upstream
nt +downstream
nt
atgtccagctcgccgctgtccaagaagcgccgcttgtcaggaacagagacgaagacggga
tcccactgctcctcctctaactctgtcagaacagatctgtcccacacacctgccaacggc
atggctaagaatggcaacgatgctgagattgatgaaggcctgtactccagacaactctat
gtgttgggccatgaagcaatgaagcgcatgcagaactccaatgtcctcatttctggcatg
agaggtcttggagttgagattgctaaaaatgtcatcctgggtggagtcagaagtgtcact
gtgcatgaccagggagttgcagaatggagagacctttcttctcagttttacctccgggag
gcggatttggggaagaacagagccgaggtgagccagccccgtttggctgaactgaacagc
tatgttccagtgtcggcctataccggagcgctaaccgaggactacctgacgaagttccag
gtggtagttcttactaactcaactcttgatgagcaaaaacagttaggggatttctgccac
agtaaagggatcaagataataactgcagacacacgtgggctgtttggtcaacttttctgt
gactttggagatgaaatgattgtgtatgacaccaatggagagcagcctcttagtgccatg
atttccatgatcaccaaggattcctctggagtcgttacatgtctcgatgaggctcgtcac
ggctttgagagtggtgattacgtcaccttcacagaggttcagggcatggtcgaactcaac
ggctgtcagccagtggaaattaaagttcttggtccatacacattcagcatctgtgacaca
accggcttttcagactatgtcagaggaggaatagtttctcaggttaagatgcccaagaag
attggatttaaatccatctcctcctccatggctgagcctgagtttgtgttgacggacttt
gctaagtttgatcgtccaggacagctgcatgtgggcttccaggctattcacgccttccag
aaaaagcacaaccggcttcctgcaccttggagcatggctgatggtgaagagctgctcaat
ctggccaaagaggtgaactctgctcagacgggttctgccaaagtggaggagctggacgaa
gatcttatcaaaaaggtttcgttcctggctgcgggggatctttctccaatcaatgccttc
attgggggtgtggctgcacaagaagtgatgaaggcgtgtacagggaaattcatgcctgta
atgcagtggctgtacttcgatgccctggagtgcctgtctgaagacgctggagtccagctc
acagaggaagagtgtgctcctaggaactctcgttatgatgggcagatcgcagtgtttggt
actaaactacaagacctgcttgccagacaacgttacttcctggttggagctggtgccatt
ggctgtgagctgttgaaaaactttgccatgataggactggcaagcggagagggtgaggtc
attgtgaccgacatggacaccatcgaaaaatccaacctcaacagacaattcctgttcagg
ccatctgatgtcacgaaaatgaagagcgacacagctgctgcagcagtgaagaagatgaac
ccctccatcaggatcacaggccatcaaaaccgagtgggccctgaaacagagagggtttat
gatgatgacttctttgaaagcctagacggcgttgccaacgcgttggataacgtcgatgca
cgtatgtacatggaccggcgttgtgtttactaccgtaaacccttactggagtccggtacc
ttaggtaccaaaggcaacgtccaggttgtgatccccttcctcacagagtcgtacagctcc
agtcaagacccacctgagaagtccatccccatctgtaccctcaagaacttcccaaatgca
atcgagcacacattgcagtgggctcgtgatgagtttgagggactgttcaagcagccgcca
gagaacgccatgcagtatctcacagatcctaagtttatggagcgtacactgaagcttcct
ggggcccagccactggaggtactggatgcagtttacaagtgtgtcgtcacagactgtcca
cacagctgggctgactgcgtagcctgggcgcgcaaccactggcagtgccagtacagcaac
aacatccgtcagctattgcacaacttcccccctgagcagctcaccagctcaggtgcacct
ttctggtctggcccaaagaggtgtcctcatcccctagaattcagcactagcaatgacttg
cacatggattacgttttggcagctgctaacctgtttgcgcagatgtacggtctgccaggt
agcaccgaccgggcaggactggtcaagattttgcaagaggtcaaggtgcccacttttacc
ccccgctcaggggttaaaattcatgtctctgatcaggagctgcaaacgagcaactcatct
gttgatgactctaaactggaagaactaaagaccaaactgccgtcaccagagtccttccag
tacaaattaaaccctgttgagtttgaaaaggatgatgataccaatttccacatggacttt
attgtggctgcatccaacctcagagcagagaactatgacattccgcctgcagatagacac
aagagcaaactgattgctggcaagatcattcctgctattgccaccaccacagctgcagtt
gttggcctggtctgcttggagctcatcaaggttgtgcaaggacacaagaagcttgagacc
tacaagaatggtttcatgaacctagccctgcctttctttgcctactctgagcccatcgct
gctccaaaacacaagtactatgaaactgaatggagtctgtgggatcgctttgaagtaaca
ggaatgcagcccaacggtgaagagatgacactccgccagtttctggattactttaaaaat
gagcatcagctggagatcaccatgctttctcagggagtgtccatgctctattcatttttc
atgccctctgccaagctcaaagagagacttgaactaccgatgactgagattgtgaccaag
gtgtccaaaaagaagctgggcaagcacgtgaaagctctggtgttcgagctctgctgtaac
gacacttcagatgaagatgtggaagtgccctacgtcagatacaccattcgctga
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