Oryzias melastigma (Indian medaka): 112159200
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Entry
112159200 CDS
T07439
Symbol
apobec2b
Name
(RefSeq) C->U-editing enzyme APOBEC-2b
KO
K18772
C->U-editing enzyme APOBEC2 [EC:3.5.4.-]
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
112159200 (apobec2b)
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Gene cluster
GFIT
Motif
Pfam:
APOBEC2
NAD1
APOBEC_N
NAD2
SNAD4
APOBEC_C
APOBEC3
APOBEC4_like
APOBEC4
APOBEC1
dCMP_cyt_deam_1
MafB19-deam
MH1
DUF5110
Motif
Other DBs
NCBI-GeneID:
112159200
NCBI-ProteinID:
XP_024148886
Ensembl:
ENSOMEG00000015449
LinkDB
All DBs
Position
LG7:9422619..9427406
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AA seq
266 aa
AA seq
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MADRSSRLGVKRKEKKVENKPNEEKDKDKGKEKMAKKPDRPGKKQEKTPEPPRADEEKTN
GESEGATGAEANQSEDNGEFQPIELPPFEIVTGDLMSPFYFKFQFRNVEYSSGRNKTLLC
FRVDAAGGSTEPLRGYMEDEHATAHAEEAFFQQVLPNSNQEYDVTWYVSSSPCVACAAKL
TTILQQRKKLRLSIFCSRLFEWEEPEIVQGLKALAQAGCKLRMMKPADFQHVWETYVEKE
DQTFTLWEDCNENYEYYMEKLADILK
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atggcggacagaagtagccggctcggcgtgaagaggaaagagaagaaagttgaaaacaag
cccaacgaggagaaagacaaagacaaggggaaggagaagatggcgaagaagcccgacagg
ccggggaagaagcaggaaaagaccccagagccgccgagggcagacgaggagaagacgaac
ggggaaagtgaaggagcaacaggagcagaggctaatcaaagtgaggataacggcgagttc
cagcccatagagctgcctccgtttgagattgtcacaggggatctgatgagtccgttctac
ttcaagtttcagttcaggaatgtggagtattcgtcagggaggaacaaaacccttctgtgt
ttcagagtggacgcagcaggcggcagcaccgagcctctgagaggttacatggaggatgaa
cacgccacagctcacgccgaagaggccttttttcaacaggtgctccccaactccaatcag
gaatatgatgtcacatggtacgtgtcatccagcccctgtgtagcctgtgccgctaagctg
accaccatcctccagcagcggaaaaagcttcgtctttccattttctgctcccgtctcttc
gagtgggaggaaccagagattgtgcaggggcttaaggctctggcgcaggccggctgcaag
ctgcgaatgatgaagccagctgacttccagcatgtttgggaaacatatgtggaaaaggag
gaccagacctttactttgtgggaggactgcaatgagaactatgaatactatatggaaaaa
ttagctgatattctcaagtag
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integrated database retrieval system