Oryzias melastigma (Indian medaka): 112159244
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Entry
112159244 CDS
T07439
Symbol
hnrnpa1b
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A1b
KO
K12741
heterogeneous nuclear ribonucleoprotein A1/A3
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112159244 (hnrnpa1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oml03019
]
112159244 (hnrnpa1b)
03041 Spliceosome [BR:
oml03041
]
112159244 (hnrnpa1b)
Messenger RNA biogenesis [BR:
oml03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
112159244 (hnrnpa1b)
mRNA cycle factors
Common to processing body (P body) and stress granule
112159244 (hnrnpa1b)
Spliceosome [BR:
oml03041
]
Common components
Common spliceosomal components
hnRNP proteins
112159244 (hnrnpa1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
RRM_3
Motif
Other DBs
NCBI-GeneID:
112159244
NCBI-ProteinID:
XP_024148963
Ensembl:
ENSOMEG00000015959
UniProt:
A0A3B3CA26
LinkDB
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Position
LG7:9045727..9048399
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AA seq
329 aa
AA seq
DB search
MSKDVPREPEQLRKLFIGGLSFETTDESLRAHFEQWGTLTDCVVMRDPNSKRSRGFGFVT
YSSVQEVDAAMSARPHKVDGRVVEPKRAVSREDSNRPGAHITVKKIFVGGIKEDTEESHL
RDYFQQFGKIEVIDIMTDRNTGKKRGFAFVTFDDHDSVDRIVIQKYHTINSHNCEVRKAL
TKQEMQSAGMGMRGGRSSGGGRPYDYDRGFNQGGRGRYGDGPYNGNGGGDGGYGGGPGGP
GGYNSGNRGYNQGYNQGGGYGGNGYDSNGYGNCGSGNNYNNMGHYDPQASNFGPMKNNFG
GGGGGGGRNFSGYGGGSNNGGGYGRPGRF
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaagacgtcccacgtgagccagagcagcttcgcaagctctttattggaggcctg
agcttcgagacaacagatgaaagcctccgagctcactttgagcaatggggtaccctgaca
gactgtgttgtgatgagggatccaaacagcaagaggtctcggggttttggctttgtgacc
tactcctctgtccaagaagttgatgccgccatgtctgctcgtccacataaggttgatgga
cgagtggtggaacccaaacgagcagtttctagagaggattcaaatcgtcctggtgctcac
ataactgtgaaaaagatttttgttggagggatcaaggaagacacagaagaatcccacctg
agggattacttccaacagtttggcaaaattgaagtcattgatattatgactgaccgaaac
actggaaaaaagaggggctttgcctttgttacctttgatgatcacgattctgttgacagg
attgtcatccagaaataccacacaatcaattcccacaactgtgaggtgagaaaagccctg
accaaacaggagatgcagagtgctggaatgggaatgaggggtggccggagcagcgggggt
ggaagaccctatgactatgacagagggtttaaccaaggtggcaggggcagatatggagat
ggtccttacaacggtaacggaggaggtgatggcggttatggaggtggcccaggtggtcct
ggaggttataacagtggcaaccgtggatacaaccagggctacaaccaaggtggtggatat
ggtggaaatggttatgatagtaatggttatggaaactgtggaagtggcaataactacaac
aacatgggccactatgacccccaggcttctaactttggtccaatgaagaacaactttggt
ggtggtggtggcggcggaggccgaaacttcagtggatatggtggtggttctaacaacggc
ggtggctatggccgtccaggacgattctga
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