KEGG   Oryzias melastigma (Indian medaka): 112159310
Entry
112159310         CDS       T07439                                 
Symbol
nfascb
Name
(RefSeq) neurofascin isoform X1
  KO
K06757  neurofascin
Organism
oml  Oryzias melastigma (Indian medaka)
Pathway
oml04514  Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:oml00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    112159310 (nfascb)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:oml04515]
    112159310 (nfascb)
Cell adhesion molecules [BR:oml04515]
 Immunoglobulin superfamily
  L1 family
   112159310 (nfascb)
SSDB
Motif
Pfam: I-set Ig_3 ig Ig_2 fn3 Bravo_FIGEY V-set Ig_DSCAM-DSCAML_C Ig_5 C2-set_2 Ig_6 Pur_ac_phosph_N V-set_CD47 BiPBP_C
Other DBs
NCBI-GeneID: 112159310
NCBI-ProteinID: XP_024149085
Ensembl: ENSOMEG00000004383
LinkDB
Position
LG7:16409234..16423674
AA seq 1180 aa
MRRLVGPGLLLLLWHSVWSLDIPLDVRQPPTIIKQSLKDHIVDPKETMVIECEAIGNPHP
TFSWRRNGKYFNVARDSQVSMRRRAGTLEIYARNNPEKYEAEYQCIASNQYGSAYTHKIS
LQMYRPPVWPREILEPVVISAGLPLVLPCDPPAGPPKPETYWMSSCSYARPFNWPIQTAF
PTMQPVRQDRRVSMGINGDLYFSNVLFNDSAVDYCCNARFPHKNAIQQKMPVVVKVLSTH
STAEAAPTWLSPRGSSSSKLVLQGEELLLECIAAGVPTPHIAWTKDGENLPVTHRIKIKN
FNKMIQIPKAEFEDAGEYTCSATNKIGYIEQTISVIVKAAPFWVEKPTNLILAPEETGRL
VCRSDGVPRPTISWFMNGDPIEDALPQSNRLVAGDTITLRSVTTENTGVYQCNASNQYGY
LLANAFVNVLHSTPRIIGPKNEVVKVIEGSRAFLDCRFFGSPVPDLRWSKYGQGNLEGTR
FKTHSNGTLEVKRIQLEDEGTYVCVISNIAGRDENQVKVEVKEPIVIVTKPQSMKVIRGT
DVRLECAVKADATTPFTTTWIKNKKQISFGWRVSLDESNLVITDVNRGDEGNYTCVFKNE
LDQKSASAHLLVMDRPNPPTDLELSDPFERSVRLSWVPGDSNHSPITDYLVQYDDDDWLP
GKWRNLSTYPGNLNSVILHLIPFTYYEFRVIAINAVGASRPSRPSSRFQTSGAPPDVIPK
NVKGVGTWRNNMEISWEPLTYREWNGPHLKYLVWWRRRDSREEWKNATTKWLRYYIYDAD
TFTPYEIKVQAVNDFGLGPESPVVIGYSGEDRPLAAPLNLRVSDIESTQVTVHWDPVSRE
AIMGELREYKVYYWRDSSQLRWLWVNRGMKSKIFPNNDPEPSGVITDLIPYSNYKMYIVV
ANSRYEGPPSNNIHFSTPEGVPSAPTSFRIQQRHLDSIYVDWSLPAEPNGIITGYSLKYH
TLNATRGEEMRVEDFPPNVTSFSIRRYDRYTRYWFSVAARTRIGIGDWHTEESPHYTTET
YAQDQVDITTQGWFIGIMCAVALLVLILLIVCFIKRSRGGKYPVREKKDISLEPVDDKDQ
EGSFDYRSLERITHVSTLPFPRRHIEEERLQRAQPAVEAMMKRVDSDDSLVEYGEGGEMQ
FEEDGSFIGQYTGTRRDVRDLDFSGGLELRSPMNTIYSLA
NT seq 3543 nt   +upstreamnt  +downstreamnt
atgaggaggctggttggaccagggctgctgttgcttctgtggcacagtgtttggtctctg
gatattccacttgacgtcagacaacccccaacgattataaagcaatccctaaaggaccat
attgtggaccccaaagaaacaatggtcatagagtgtgaagctataggcaacccgcatcct
actttctcatggaggcgtaatggaaaatatttcaatgtggcgcgtgactcccaggtgtcg
atgcgcaggcgcgcaggaactttggagatctatgcccggaataatccagaaaagtatgaa
gcagagtaccagtgcattgcttccaatcagtacggatctgcgtacacccacaagatcagt
ctacaaatgtatagacctccagtttggccacgggagatcctggagcctgtagtcatcagt
gcgggcttgccgctggttctgccctgtgaccccccagcaggaccacctaaacctgaaacc
tactggatgtctagctgttcatatgcaaggccgttcaactggcccatccagacggctttc
cccaccatgcagcctgtgcggcaggaccgcagggtttccatgggaatcaatggagatctg
tatttctccaatgtgttgtttaatgactctgctgttgattactgctgtaatgctcgcttc
cctcacaagaatgcaattcagcagaagatgcctgtggttgttaaggtgctttcaacccac
tctactgctgaggctgcccccacctggttgtctcccaggggctcgtccagctccaaactg
gtcctccaaggggaggagctgctcctggagtgtatagctgcgggagtgccaactcctcat
attgcctggaccaaggatggggagaaccttccagtgacacatcgtattaaaataaagaat
ttcaacaaaatgattcaaatcccaaaggcggaatttgaagatgcaggagaatacacctgc
tctgcaactaacaagataggttacattgaacaaacaatatctgtcatagttaaagcggct
cctttctgggtggaaaaacctacaaatttaattctggcgcctgaggaaaccgggcggttg
gtgtgccgttctgacggggttcctcgtcccaccatcagctggttcatgaatggggacccg
attgaagatgcactcccacagtccaacagactggtggccggggatactataactttgcgc
agtgtgaccacagaaaatactggtgtctaccagtgcaacgcctccaatcagtacgggtac
ctactggccaatgcatttgtcaatgtactgcattctacccctcgtatcattggtcctaag
aacgaagttgtcaaagtgatagaaggaagtcgagcgtttttagactgtcgcttctttggt
tctcctgttcctgacctgcgatggtcaaaatatggacaaggcaatcttgaggggactcga
ttcaagacccacagtaatggaactcttgaagtcaagcggatacaactagaagatgaggga
acttacgtgtgcgtcatcagcaacattgcaggacgagacgaaaaccaagtcaaagtggaa
gtcaaagagcctatagtaattgtcaccaaaccacaaagtatgaaggtcattcgaggaacg
gatgtccgcctcgagtgtgctgttaaagcagatgccaccactccattcacaacaacatgg
ataaaaaacaaaaagcaaatctctttcggctggagagtctctctggatgaatcaaatcta
gtcattactgatgtgaacagaggagatgagggcaactacacctgtgtctttaagaatgag
ctggaccagaagtctgcctctgcacacctgctagtgatggaccgtccaaatcctccaact
gaccttgagttgtctgatccatttgaacgcagtgtgcgactcagttgggttcctggtgac
agcaaccatagcccaattactgattacttggtgcagtatgacgacgacgactggcttcct
ggaaaatggagaaatctgtcaacatacccaggaaaccttaactctgttatcttgcatctc
ataccatttacctactatgagttcagagttattgcaattaatgcagttggcgccagtcgt
ccaagtcgcccatcatctcgcttccagaccagtggtgcacccccagacgtcatcccaaag
aacgtgaaaggtgtgggcacatggagaaataacatggaaatcagctgggagcctctaacc
tacagagagtggaacggacctcacttgaagtatctggtgtggtggagaaggagagattct
agggaagagtggaagaatgcaactacaaagtggttgagatactacatctatgatgcagat
accttcaccccttatgagatcaaagtccaggctgtcaatgactttgggctggggccagag
tcacccgtagtcattggttattctggtgaagaccgtccactggctgcacctttaaatcta
agagtttctgacattgaaagcactcaagtcactgtacactgggacccagtgtcacgagag
gccatcatgggagagctaagggagtataaggtctactactggagagacagcagtcagctg
cggtggttgtgggtcaacagaggaatgaagtccaaaatattcccaaacaatgatccagaa
ccatctggagtcatcacagacctcataccttatagcaactataagatgtatatagtggta
gctaacagtcggtatgaagggccaccgagtaacaacatacacttctcaacacctgaagga
gtaccgtccgcccccacatccttcagaatccaacagcgccatctggacagtatttatgtt
gactggagtctgccagcagaacccaacgggatcatcactggatactctctgaagtatcac
acattgaacgccaccagaggagaggagatgagagtcgaggatttcccacctaatgtgaca
agcttctccatccgccgttatgaccgatacactcgctactggttctccgtggcagcccga
actcggattggaatcggagactggcacacggaggagtcgccgcattacaccaccgaaacg
tacgctcaggaccaggtggacatcaccacccaaggctggttcatcgggatcatgtgtgct
gtggctctcctcgtgctcatcctcctcattgtctgcttcatcaagagaagccgaggcggg
aaatacccagttcgagagaaaaaggacatttcactggagcctgtggatgacaaagatcag
gaaggctcatttgactatcgatcccttgaaaggatcacacacgtctccacgctgcctttt
cctcggaggcacatagaggaggagaggcttcaaagagcccagccggctgtggaagccatg
atgaaacgagtagacagtgacgacagtctggtggaatatggagaaggaggggagatgcag
tttgaagaggatggctccttcatcggacagtacacaggaaccaggagagatgtcagagac
ttggatttcagcggaggtctggagctccgatctccaatgaatactatatactcccttgcg
tga

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