Oryzias melastigma (Indian medaka): 112159310
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Entry
112159310 CDS
T07439
Symbol
nfascb
Name
(RefSeq) neurofascin isoform X1
KO
K06757
neurofascin
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
112159310 (nfascb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oml04515
]
112159310 (nfascb)
Cell adhesion molecules [BR:
oml04515
]
Immunoglobulin superfamily
L1 family
112159310 (nfascb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
Bravo_FIGEY
V-set
Ig_DSCAM-DSCAML_C
Ig_5
C2-set_2
Ig_6
Pur_ac_phosph_N
V-set_CD47
BiPBP_C
Motif
Other DBs
NCBI-GeneID:
112159310
NCBI-ProteinID:
XP_024149085
Ensembl:
ENSOMEG00000004383
LinkDB
All DBs
Position
LG7:16409234..16423674
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AA seq
1180 aa
AA seq
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MRRLVGPGLLLLLWHSVWSLDIPLDVRQPPTIIKQSLKDHIVDPKETMVIECEAIGNPHP
TFSWRRNGKYFNVARDSQVSMRRRAGTLEIYARNNPEKYEAEYQCIASNQYGSAYTHKIS
LQMYRPPVWPREILEPVVISAGLPLVLPCDPPAGPPKPETYWMSSCSYARPFNWPIQTAF
PTMQPVRQDRRVSMGINGDLYFSNVLFNDSAVDYCCNARFPHKNAIQQKMPVVVKVLSTH
STAEAAPTWLSPRGSSSSKLVLQGEELLLECIAAGVPTPHIAWTKDGENLPVTHRIKIKN
FNKMIQIPKAEFEDAGEYTCSATNKIGYIEQTISVIVKAAPFWVEKPTNLILAPEETGRL
VCRSDGVPRPTISWFMNGDPIEDALPQSNRLVAGDTITLRSVTTENTGVYQCNASNQYGY
LLANAFVNVLHSTPRIIGPKNEVVKVIEGSRAFLDCRFFGSPVPDLRWSKYGQGNLEGTR
FKTHSNGTLEVKRIQLEDEGTYVCVISNIAGRDENQVKVEVKEPIVIVTKPQSMKVIRGT
DVRLECAVKADATTPFTTTWIKNKKQISFGWRVSLDESNLVITDVNRGDEGNYTCVFKNE
LDQKSASAHLLVMDRPNPPTDLELSDPFERSVRLSWVPGDSNHSPITDYLVQYDDDDWLP
GKWRNLSTYPGNLNSVILHLIPFTYYEFRVIAINAVGASRPSRPSSRFQTSGAPPDVIPK
NVKGVGTWRNNMEISWEPLTYREWNGPHLKYLVWWRRRDSREEWKNATTKWLRYYIYDAD
TFTPYEIKVQAVNDFGLGPESPVVIGYSGEDRPLAAPLNLRVSDIESTQVTVHWDPVSRE
AIMGELREYKVYYWRDSSQLRWLWVNRGMKSKIFPNNDPEPSGVITDLIPYSNYKMYIVV
ANSRYEGPPSNNIHFSTPEGVPSAPTSFRIQQRHLDSIYVDWSLPAEPNGIITGYSLKYH
TLNATRGEEMRVEDFPPNVTSFSIRRYDRYTRYWFSVAARTRIGIGDWHTEESPHYTTET
YAQDQVDITTQGWFIGIMCAVALLVLILLIVCFIKRSRGGKYPVREKKDISLEPVDDKDQ
EGSFDYRSLERITHVSTLPFPRRHIEEERLQRAQPAVEAMMKRVDSDDSLVEYGEGGEMQ
FEEDGSFIGQYTGTRRDVRDLDFSGGLELRSPMNTIYSLA
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
atgaggaggctggttggaccagggctgctgttgcttctgtggcacagtgtttggtctctg
gatattccacttgacgtcagacaacccccaacgattataaagcaatccctaaaggaccat
attgtggaccccaaagaaacaatggtcatagagtgtgaagctataggcaacccgcatcct
actttctcatggaggcgtaatggaaaatatttcaatgtggcgcgtgactcccaggtgtcg
atgcgcaggcgcgcaggaactttggagatctatgcccggaataatccagaaaagtatgaa
gcagagtaccagtgcattgcttccaatcagtacggatctgcgtacacccacaagatcagt
ctacaaatgtatagacctccagtttggccacgggagatcctggagcctgtagtcatcagt
gcgggcttgccgctggttctgccctgtgaccccccagcaggaccacctaaacctgaaacc
tactggatgtctagctgttcatatgcaaggccgttcaactggcccatccagacggctttc
cccaccatgcagcctgtgcggcaggaccgcagggtttccatgggaatcaatggagatctg
tatttctccaatgtgttgtttaatgactctgctgttgattactgctgtaatgctcgcttc
cctcacaagaatgcaattcagcagaagatgcctgtggttgttaaggtgctttcaacccac
tctactgctgaggctgcccccacctggttgtctcccaggggctcgtccagctccaaactg
gtcctccaaggggaggagctgctcctggagtgtatagctgcgggagtgccaactcctcat
attgcctggaccaaggatggggagaaccttccagtgacacatcgtattaaaataaagaat
ttcaacaaaatgattcaaatcccaaaggcggaatttgaagatgcaggagaatacacctgc
tctgcaactaacaagataggttacattgaacaaacaatatctgtcatagttaaagcggct
cctttctgggtggaaaaacctacaaatttaattctggcgcctgaggaaaccgggcggttg
gtgtgccgttctgacggggttcctcgtcccaccatcagctggttcatgaatggggacccg
attgaagatgcactcccacagtccaacagactggtggccggggatactataactttgcgc
agtgtgaccacagaaaatactggtgtctaccagtgcaacgcctccaatcagtacgggtac
ctactggccaatgcatttgtcaatgtactgcattctacccctcgtatcattggtcctaag
aacgaagttgtcaaagtgatagaaggaagtcgagcgtttttagactgtcgcttctttggt
tctcctgttcctgacctgcgatggtcaaaatatggacaaggcaatcttgaggggactcga
ttcaagacccacagtaatggaactcttgaagtcaagcggatacaactagaagatgaggga
acttacgtgtgcgtcatcagcaacattgcaggacgagacgaaaaccaagtcaaagtggaa
gtcaaagagcctatagtaattgtcaccaaaccacaaagtatgaaggtcattcgaggaacg
gatgtccgcctcgagtgtgctgttaaagcagatgccaccactccattcacaacaacatgg
ataaaaaacaaaaagcaaatctctttcggctggagagtctctctggatgaatcaaatcta
gtcattactgatgtgaacagaggagatgagggcaactacacctgtgtctttaagaatgag
ctggaccagaagtctgcctctgcacacctgctagtgatggaccgtccaaatcctccaact
gaccttgagttgtctgatccatttgaacgcagtgtgcgactcagttgggttcctggtgac
agcaaccatagcccaattactgattacttggtgcagtatgacgacgacgactggcttcct
ggaaaatggagaaatctgtcaacatacccaggaaaccttaactctgttatcttgcatctc
ataccatttacctactatgagttcagagttattgcaattaatgcagttggcgccagtcgt
ccaagtcgcccatcatctcgcttccagaccagtggtgcacccccagacgtcatcccaaag
aacgtgaaaggtgtgggcacatggagaaataacatggaaatcagctgggagcctctaacc
tacagagagtggaacggacctcacttgaagtatctggtgtggtggagaaggagagattct
agggaagagtggaagaatgcaactacaaagtggttgagatactacatctatgatgcagat
accttcaccccttatgagatcaaagtccaggctgtcaatgactttgggctggggccagag
tcacccgtagtcattggttattctggtgaagaccgtccactggctgcacctttaaatcta
agagtttctgacattgaaagcactcaagtcactgtacactgggacccagtgtcacgagag
gccatcatgggagagctaagggagtataaggtctactactggagagacagcagtcagctg
cggtggttgtgggtcaacagaggaatgaagtccaaaatattcccaaacaatgatccagaa
ccatctggagtcatcacagacctcataccttatagcaactataagatgtatatagtggta
gctaacagtcggtatgaagggccaccgagtaacaacatacacttctcaacacctgaagga
gtaccgtccgcccccacatccttcagaatccaacagcgccatctggacagtatttatgtt
gactggagtctgccagcagaacccaacgggatcatcactggatactctctgaagtatcac
acattgaacgccaccagaggagaggagatgagagtcgaggatttcccacctaatgtgaca
agcttctccatccgccgttatgaccgatacactcgctactggttctccgtggcagcccga
actcggattggaatcggagactggcacacggaggagtcgccgcattacaccaccgaaacg
tacgctcaggaccaggtggacatcaccacccaaggctggttcatcgggatcatgtgtgct
gtggctctcctcgtgctcatcctcctcattgtctgcttcatcaagagaagccgaggcggg
aaatacccagttcgagagaaaaaggacatttcactggagcctgtggatgacaaagatcag
gaaggctcatttgactatcgatcccttgaaaggatcacacacgtctccacgctgcctttt
cctcggaggcacatagaggaggagaggcttcaaagagcccagccggctgtggaagccatg
atgaaacgagtagacagtgacgacagtctggtggaatatggagaaggaggggagatgcag
tttgaagaggatggctccttcatcggacagtacacaggaaccaggagagatgtcagagac
ttggatttcagcggaggtctggagctccgatctccaatgaatactatatactcccttgcg
tga
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