Oryzias melastigma (Indian medaka): 112159324
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Entry
112159324 CDS
T07439
Name
(RefSeq) probable E3 ubiquitin-protein ligase DTX3
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
112159324
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oml04121
]
112159324
Enzymes [BR:
oml01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112159324
Ubiquitin system [BR:
oml04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
112159324
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
zf-C3HC4_2
zf-RING_2
zf-C3HC4
zf-C3HC4_4
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
zf-RING_10
RING_XB3-XBAT31
zf-rbx1
zf-RING_6
GAGA
Zn_ribbon_6
Motif
Other DBs
NCBI-GeneID:
112159324
NCBI-ProteinID:
XP_024149101
Ensembl:
ENSOMEG00000019225
LinkDB
All DBs
Position
LG7:7713181..7717419
Genome browser
AA seq
196 aa
AA seq
DB search
MDDTQSRQSESMGDCPICLDHIQKKKTLKCHHSFCAECIDSVFRLKPACPICNTFHGVYT
GTQPSGTMTVNRSWQRLPGFEHCQSIVIEYYFPAGVQGPEHPNPGMRYSSTSRTAFLPAC
EEGEKVLRLLRKAFDRRLLFTIGRSATTGLNNVITWNDIHHKTSTGGGPQCFGYPDPGYL
SRVQEELRLKGVTEDD
NT seq
591 nt
NT seq
+upstream
nt +downstream
nt
atggacgacacgcagagccgtcagagtgagagtatgggagactgccccatctgtttggac
cacatccaaaagaagaaaacactcaagtgtcatcattcgttctgcgccgagtgcattgac
tccgtattcagactcaaacccgcatgtccgatatgtaacacctttcatggagtttacact
ggaacccagccgagcggtactatgacggtgaatcgcagctggcagaggctgccagggttc
gaacactgccagtctatcgtcattgagtactacttcccagcaggagtacaagggcctgaa
catccaaaccctgggatgaggtacagcagcacctcccgcactgccttcctgcccgcctgt
gaggagggggagaaggtcctgaggctgctcaggaaagcttttgacaggagactcctcttc
accatagggcgatctgccaccacaggcctcaacaacgttatcacatggaatgatatccac
cacaagactagcaccggaggaggccctcaatgttttggttatccagatccaggatatttg
tccagagttcaggaggagcttcgtctcaaaggagtgacagaggacgactga
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