Oryzias melastigma (Indian medaka): 112159335
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Entry
112159335 CDS
T07439
Symbol
rbl1
Name
(RefSeq) retinoblastoma-like protein 1
KO
K04681
retinoblastoma-like protein 1
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04110
Cell cycle
oml04218
Cellular senescence
oml04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
112159335 (rbl1)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
112159335 (rbl1)
04218 Cellular senescence
112159335 (rbl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oml03000
]
112159335 (rbl1)
Transcription factors [BR:
oml03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
112159335 (rbl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RB_A
RB_B
DUF3452
TFIIB
Rb_C
Motif
Other DBs
NCBI-GeneID:
112159335
NCBI-ProteinID:
XP_024149115
Ensembl:
ENSOMEG00000017508
LinkDB
All DBs
Position
LG7:25319505..25339339
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AA seq
1052 aa
AA seq
DB search
MRGEESSDSESGRMEESSVRRSLEVLCQELNMDEQTASEAMENFSSIWNTYTLEGEVVHW
LACSLYAACRKGSTPTVGKGLMEGNCVSLTRILRSSKLSLIQFFSKMRKWADMSNLSQDF
RLRMDRLERNFEVSTVIFRKFEPIFMDMFQNPQGSEPPRQPRSRKHRRLPCHISDVFKFC
WTLFVYTKGNFRMIGDDLVNSYHLLLCCLDLVFGNALLCANRKDLINPSFRGLPPQYRTD
GHVLPDEPPPCVLERLCELHDGLVVEAKGIKQHYFKPYIQKLFQRQILKGNPDLLTELLD
PQNFIDNNKAINREYEEYVLTVGDFDERVFLGADADEEIGTPRKVPPDRSAGPMQHSVEK
PASLAPSTPLTGRVYLKEKDLLVTPVSSATQSVSRLQSMVAGLRTAPSENLMQIFKTCSR
DPSGSVLARVKSLGQTFKEHYTNDSEDSPGSHIDFAENRLKLAEILYYKVLENVLVQETK
RLQGRDMSALLEQDIFHCSLMACCLEVVLFSYSSQRTFPWIIQVFKLAPFYFFKVIEVFI
RSEEGLSRDMVKHLNSIEEQVLESRAWTADSALWSALEAAGNKVPSVEEVNFSSCLDSGS
SNGVQPHLPLAAHSPIIHPRIREFRAGLGSARKEVPPSPLSVHDRYSSPAAGSAKRRLFG
DDPPAPSVGLTSPAGPLPSPAKKLTFSSSGSTTLKIGGQGAQTTVVSLPLQGVSSDRTFT
LIPVSSCDSSGVVTAQFLLTSSPSRPAAVAMTTEPQAGSGRPRRTGSLALFFRKVYHLAS
VRLRDLCMKLDISSELRGKIWTCFEHSLVHCTDLMKDRHLDQLLLCSIYIISKITKETHT
FQDIMKCYRSQPQASSYVYRSVLIRRTPKDLSADENMEEGSASEEDSAKKTNQLPGNPNP
MEEERGDLIQFYNAVYVVKMKSFALRYATSENQADAPPLSPFPSVRAQPLSPRRVSQSHS
LYVSPHKNSPGCFSPNSYTYRINSSPSKDLSDINRMIRQGSASRKRAFTMEGDVTMASAC
DSPSKRACPENGGSPDVLLKRLQDVVSERQSH
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atgcgaggggaggagtcttcggattctgagtcggggaggatggaggagagttcggtccgg
aggagtttggaggtgctgtgtcaggagctgaatatggacgaacagacagccagtgaggcc
atggagaacttcagctccatatggaacacatacacgctggagggggaggtggtccactgg
ctggcctgctctctatatgcggcctgcaggaaggggtccacccccaccgtggggaagggg
ctgatggagggcaactgtgtgtccctgaccaggatcctgcgctcctccaaactcagcttg
atccagttcttctctaagatgaggaagtgggccgacatgtcaaatctgtcacaagacttc
cggcttcggatggaccggctggagcgaaactttgaggtttccactgtgatcttccgaaag
tttgagcccatcttcatggacatgttccagaaccctcagggcagcgagcccccccggcag
ccccgcagcaggaagcacagacggctgccctgtcacatcagtgacgtcttcaagttctgc
tggactctctttgtctacactaaaggaaacttccgtatgatcggcgatgacctggtgaac
tcgtaccacctgctgctctgctgtctggacttggtgtttggcaacgctctgctgtgtgca
aacaggaaggacctcatcaacccgtctttcagaggtctgcccccacagtaccgcacagac
ggccatgttctgcccgatgagccccccccctgtgtgctggagaggctgtgtgagctccat
gatgggctggtggttgaagccaaaggcatcaagcagcactacttcaaaccctacatccag
aagctcttccagagacagatcctgaagggaaacccggatcttctgacggagctgctggac
cctcagaacttcatagacaacaacaaagccattaacagggagtatgaggagtacgtgctg
acggtgggggacttcgatgagcgggtgttcctgggagccgacgcagacgaggaaatcgga
actccgaggaaggtccctccagaccgatctgccggtccgatgcagcacagcgtggagaag
cccgcctccctggctccatccacgccgctgacggggcgggtctacctgaaggagaaggac
ctgctcgtcactcctgtctcctcggcgacgcagagcgtcagccgcctgcagagcatggtg
gcgggtctgaggacggcccccagcgagaacctgatgcagatcttcaaaacctgctccagg
gatcccagcgggtccgtcctggcccgcgtgaagagtctgggtcagaccttcaaagaacat
tacaccaacgactcggaggactctcccggttctcacatagactttgcagagaaccggctg
aaactggcagagatcctttactacaaggttctggagaacgttctggtgcaggagaccaag
cgtttgcagggcagagacatgagtgctctgctggaacaggacatcttccactgctcgctg
atggcctgctgcctggaggtggtgctcttctcctacagctcgcagaggaccttcccctgg
atcatccaggtcttcaaactggccccgttctacttctttaaggtgatcgaggtgttcatc
cgctctgaggagggcctgtccagagacatggtgaagcacctgaactccatcgaggagcag
gttctggagagcagagcgtggaccgcagactcggcgctgtggagcgccctggaggctgcg
gggaacaaagttccctctgtggaggaggtgaacttctcctcctgtctggactcgggttcc
tctaacggcgttcagcctcacctgccgctggcggcccactcccccatcatccacccccgc
atccgggagttcagggcgggtttggggagtgcccggaaagaggtgcccccctccccgctg
tctgtgcacgacaggtacagctctccggcggccggaagcgccaagcggcgtctcttcggc
gatgaccctccagctccgtccgtgggcctgacctcccccgcggggcctctgccctcccca
gccaagaaactgaccttcagctcgagcggcagcacaacgctgaagatcggcggccagggc
gctcagacgacggtcgtgagtctcccgcttcaaggcgtgagcagcgaccgcaccttcacc
ctcatccccgtctcgtcctgcgattcctctggagtcgtgaccgcccagttcctgctgacg
tcatccccgagccgacccgccgccgtcgccatgacaaccgaaccccaggcgggaagcggc
cggccgcggcgcacaggatcgctcgccctgttcttcaggaaggtgtaccacctggccagc
gtccgtctgagggacctgtgcatgaagctggacatctcctccgagctgcgcgggaagatc
tggacgtgtttcgagcactcgctggtccactgcaccgacttgatgaaggaccgccacctg
gaccagctgctgctctgcagcatctacatcatctctaagatcaccaaagagacccacacc
ttccaggacatcatgaagtgttaccgcagccaaccacaggccagcagctatgtgtatcgc
agcgtgctgattcgccggacgcccaaagacctgtcagctgatgagaacatggaggaaggc
tctgcctctgaggaagactccgcaaagaaaaccaaccagcttccaggaaaccccaatccc
atggaggaggagcgcggcgacctcatccagttctacaacgccgtttacgtggtgaagatg
aagagcttcgctctgcgatacgccaccagcgagaaccaggctgacgcgccgccgctctcg
ccgttcccgtcggtgcgggctcagcctctgtcgccccgccgggtctctcagagccactcg
ctgtacgtctccccccacaagaactcccccggctgcttctcccccaactcctacacctac
aggatcaacagcagcccgtccaaggatctgtccgacatcaaccggatgatccgacagggc
tctgccagcaggaagagggccttcaccatggagggggacgtgaccatggcgtccgcatgt
gactcgccaagtaagagggcgtgtccagagaacggcggtagcccggacgtgctgctgaag
cgtctgcaggacgtggtgtcagagcggcagagccactga
DBGET
integrated database retrieval system