Oryzias melastigma (Indian medaka): 112159338
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Entry
112159338 CDS
T07439
Symbol
cntn3a.2
Name
(RefSeq) contactin-3 isoform X1
KO
K06761
contactin 3/4/5/6
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oml04515
]
112159338 (cntn3a.2)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
oml00537
]
112159338 (cntn3a.2)
Cell adhesion molecules [BR:
oml04515
]
Immunoglobulin superfamily
Contactins
112159338 (cntn3a.2)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
oml00537
]
Others
112159338 (cntn3a.2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
fn3
V-set
Ig_DSCAM-DSCAML_C
C2-set_2
V-set_CD47
Sp38
Ig_4
Ig_C17orf99
C2-set_3
Izumo-Ig
Tissue_fac
Pur_ac_phosph_N
Motif
Other DBs
NCBI-GeneID:
112159338
NCBI-ProteinID:
XP_024149118
Ensembl:
ENSOMEG00000003397
UniProt:
A0A3B3D1M9
LinkDB
All DBs
Position
LG7:5477881..5536863
Genome browser
AA seq
1026 aa
AA seq
DB search
MTLPWKQLLLLSIIDCLTDCLDSGSYHGPRWRMEPGDLFIPVDSIEEEATLTCDAKGMPA
PQYRWSLNGTLINLSLDRRRRLSGGNLIISSLDRYQDVGIYQCMAYNTVGAILSRRASLQ
FAYLDHFKVHTRSAVSVREGQGVVLLCGTPTSSGDLTYAWVFNEYPYFVQQDNRRFVSQQ
TGNLYISKVESSDVGNYTCVVMNSITKGKVHSSPTSLNLRTDGVMGEYEPKIEVHFSDNV
PAAKGTTVTLECFALGNPVPEITWRRANGIPFPSKVKMKYSNAVMEIPSFQQDDAGGYEC
VAENKMGKNTAAGRLAFYAKPQWIQTMKDTALAIEERLYWECRANGKPKPSYTWLKNGQQ
LLSDDRTHVEDGVLSVSMLTLTDAGMYQCVAENKHGVIYFAAELMVLASPPDFTGNVLRS
LLKAKAGTTVTLECKPKAYPTANILWKKGNLPVQTNDRITLSSDGTLRLANVSKSDAGSY
TCFARNRFGMSSTTGRLLVTDPTRFVQGPVDMEIIVGESIVLPCQIASDPVLDVSFSWAF
NGQLISKRDGHFELVGGRTAGDLMIRNIQLYHSGKYICVVDTDVESLSAVAVLIVKGAPS
PPDSVTVEEVTDSTAQLAWSPGRDNGSPITNYLIQTRTPFTVGWQRVNTVPEIITGSTLT
ATVVDLNAWVEYEFRVLAKNSVGVGEPSPVSVKTRTEDAVPDVAPGDVGGGGGSRSELVI
TWEPVPEELQNGESFGYIIAFRAFGEVSWIHVATSAPGASRYVYRNDSIAPFSPFHVKVG
TYNSKGQGPFSPVVTIYSAETEPSGMPVGVWARSVSASEIEVNWQALSITPERVLGYEVV
YWEDDTKPETMGKVRVPWNQTSVTVSGLAGNSQYFLTVSAFNTAGTGPFLPAINVTTKKP
PPAQPPLNVEWTLIGSQLSLYWEPVVAMESESEVKGYQLSYRRQRHKEVNTLTTTNSTAE
LTLPEGDDDYIIRIQTTSEGGLGPASDPIRIHKLSMSARGSRAWSADVSPVSLFLAMFMS
TFRSTL
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atgacgctgccatggaaacaacttctgctgttatcaatcatcgactgtctgacagattgt
ctggacagtggatcatatcatggcccacgctggaggatggagccaggtgacttatttatt
cctgttgattccatagaagaagaagccacgctgacgtgtgacgctaagggaatgccagct
cctcaatacagatggtcactgaacgggactctcataaatctgagtctggatcggcggcgg
cgtctgtctgggggcaacctcattataagcagtctggatcgctaccaggatgttgggatt
taccagtgtatggcctacaacactgtaggagccatcctcagccggagagccagtctacag
tttgcctacctagatcatttcaaagttcacaccaggagcgctgtgtcggtccgagaaggg
cagggagtggtgttgctgtgtggaacgcctacatcctcaggagacctaacctatgcatgg
gtcttcaatgagtacccatactttgttcagcaagacaatcggcgctttgtctcccagcag
acaggaaacctttacatctccaaggtggagtcctcagatgtgggtaactacacttgcgtg
gtgatgaacagcatcacaaagggcaaggttcacagctcacccacctcgctgaaccttagg
acagacggagtcatgggtgaatatgagccaaaaatagaagttcatttctcagacaatgta
cctgctgcaaaaggaacaactgttactctggagtgtttcgcccttgggaaccccgtccca
gaaatcacctggaggagagcgaatggaattcccttccccagcaaagttaaaatgaagtac
tccaacgccgtgatggagatccccagcttccagcaggacgacgcaggcggctacgagtgt
gtggctgagaacaagatgggcaaaaacacggcggcggggcgtctggccttctatgccaaa
cctcagtggatccagaccatgaaggacaccgctctggccatagaggagagactgtattgg
gagtgcagagctaacggaaagcccaagccctcctacacgtggctgaagaacggccagcag
ctcctttcagatgacaggacccatgtggaggatggggtcctgtcagtgtcgatgctgaca
ttaacagacgctggcatgtaccagtgtgtggctgagaataaacacggtgtcatctatttt
gctgctgaattaatggttctagcttctcctccagacttcacagggaacgtcctcagatct
ttgctcaaagccaaggcaggaactaccgtgactttggagtgtaagcccaaggcctatccc
acagccaacattctatggaagaaagggaaccttcctgtccagaccaatgacaggatcacg
ctttcttcagacggaactctgaggcttgctaacgtcagcaagtcggatgcaggcagctac
acgtgcttcgcgaggaatagatttggcatgtcaagcacaactggaaggctcctggttacg
gatccaaccagatttgtccaggggccggtggacatggagatcatcgtgggtgagagcatt
gtgttgccttgccagatcgccagtgatcccgtacttgatgtttccttctcctgggccttc
aatggacagctgatctccaaaagagatggtcactttgagctcgtgggagggagaacagca
ggcgatctgatgatcaggaacattcagctttaccattctggcaaatacatctgcgtggtg
gatactgatgtggagagcctgtcagccgtggctgtattgatcgtgaaaggcgcccccagt
cctccagactccgtgactgtggaggaagtgacagacagcacggcccagctggcgtggagc
cccggcagagacaacggcagccccattaccaattacctcattcagaccagaactcccttc
actgtgggctggcagagggttaacacagtaccagaaatcatcactgggagcactctgaca
gccactgtggtcgacctcaacgcctgggtagaatatgaattcagggttctggccaaaaac
agtgttggggtcggagagcccagtcctgtttccgttaaaacaaggacagaagatgcagtt
ccagatgtggcaccgggagatgtgggtggaggaggtggcagcagatctgagttggtcatc
acatgggagcctgttcctgaagaactgcagaatggcgagagctttggctacatcattgct
tttcgtgccttcggagaagtcagctggattcatgtggccacttctgcccccggtgcatct
cgctatgtgtaccgcaacgacagcatcgcgcccttctctccattccatgtcaaggttggc
acttacaacagcaaaggacagggtcctttcagcccagtggtcaccatctactctgcagag
acggagccaagtggaatgccagtgggagtttgggccagaagtgtctcagcctcagagatt
gaggtgaattggcaggctctctccatcactcctgaaagagttctgggctatgaggtggtc
tactgggaggacgacactaagccggagaccatggggaaggtccgggtgccttggaaccaa
acttcggtcacagtgagcggcttggcaggaaactcccagtatttcctaacagttagtgcc
ttcaacacagcaggcactggcccgtttcttcctgcaatcaacgtcaccacaaaaaaacct
cctccagctcaacctccgctgaatgttgaatggacactaattggctctcagctgtcgctt
tactgggagcctgtggtggcaatggaatcagagtctgaagttaaaggctatcaactttca
tacaggaggcagagacacaaagaggtaaacactctcacaacaaccaattcaacagcggag
ctgaccctccccgagggtgacgatgactacatcatccgcattcaaaccacgagtgaagga
ggtctggggccagcctcagatcccatacgaatacacaaactaagtatgagtgcccgcggc
tccagagcctggagcgcagacgtctcccccgtctccttgtttctcgccatgttcatgtca
acgttcaggtcaacattgtga
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