Oryzias melastigma (Indian medaka): 112159369
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Entry
112159369 CDS
T07439
Name
(RefSeq) neural cell adhesion molecule L1.1 isoform X1
KO
K06550
L1 cell adhesion molecule
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04514
Cell adhesion molecule (CAM) interaction
oml04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
112159369
04517 IgSF CAM signaling
112159369
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oml04515
]
112159369
04090 CD molecules [BR:
oml04090
]
112159369
04091 Lectins [BR:
oml04091
]
112159369
Cell adhesion molecules [BR:
oml04515
]
Immunoglobulin superfamily
L1 family
112159369
CD molecules [BR:
oml04090
]
Proteins
112159369
Lectins [BR:
oml04091
]
I-type lectins (Siglecs)
112159369
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
fn3
ig
Ig_2
Bravo_FIGEY
V-set
Ig_VEGFR-1-like_5th
FN3_DSCAM-DSCAML_C
Pur_ac_phosph_N
Ig_5
C2-set_2
Fn3_VIN3
VEGFR1-3_N_Ig-like
Tissue_fac
Motif
Other DBs
NCBI-GeneID:
112159369
NCBI-ProteinID:
XP_036068808
Ensembl:
ENSOMEG00000010709
UniProt:
A0A3B3BV78
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Position
LG7:complement(25250010..25310312)
Genome browser
AA seq
1290 aa
AA seq
DB search
MCVPQHRWRGYWGRGSPHLPLILLLSLSFLLPKRPFADGAIHIPKHYKVQNLLQPPQITK
FPKSITVFSQEDVDLHCNAFGDPTPSIRWRKNGVEFGTEHSGSGTLQTTAEEAVENYTGN
YRCYASNILGTAMTQEVKVIVESSPVIPKRKKQSKKAFEGESIVLTCNPPQSSSPPKIHW
MDFTMVHINQSDRVMTGLDGNLYFSNLLSSDSRDDYICNAQYPAALTILTVTAVRLSVLP
NNDVVPGRKTALFRPAGLQSSILALKGQNITLECIPKGLPTPVVEWRKKDGTLKDVSSRL
MNHNRWLHFGNISQEDDGEYECKASNSFGFATHTFTVTVEAAPYWVKEPQNHMYSPGETV
RLDCLADGSPAPSITWSINGQPLAEVDEDARRSITGSSLILRDVRVSDTAVYQCEATNRH
GSILLNINLFVVELPPQILSSDGVVYRVIEGADVNLHCESFGSPRPHTTWARGDMVSLLL
DARASLFTNGTIRLSGVSREDSGTYTCSVTHTNISITANLEVFNQTIISEGPKDIRVLEG
TTAFLDCDFYKDPRLLDSHLVWKRDGVELQESLPDYRYKIFENGTLKMTKLHLNDSADYS
CEVSTLLDHVTAKGSITVLVPPHSPRSLSVSGVGASRVILRWVAGPSHNSPITEFIVEAE
EKLHTGEGKAIWKKWERVSGSHTQTQLTLRPFCTYRFRIIAVNEIGESRPSEPTEDHVTP
PAVPDKNPTDVRSDSRDSGTLSITWTKVEKRFHNGDSFHYRVFWREAEGAGTETNWKHED
VSSPPFLVVNTSTYKRFEIKVQALNSIGKGPEPETRIGYSAEEKPEDSPTEVSTVVKNCT
VAVRWRPPKRVRGLLKGFKIYFRSLGPRSSESQRSSGKHHHVVRREKPERGNHKDKKSWE
LEVEGADTSKEVDGLRWYWRYELSVTAFNSKGEGPPSPPHHFQTPEGVPGPPAALWFKSP
TDTTLVLHWSPPLDANGVLVGYMVQYKEESQDSPMRMQMIHDPSVNHIRLKDLNPSSYYR
FKVIAQTVIGAGEPIKARLATLLEGVPPSNVTVDPSNTSFNLSWTPGERNRNHGFHIYYM
KKNGAASIQWEESEMVNSTQGFYSLTGLQPGTQYHLKIMKGNDTQWEDVLWTIGPVPSEM
PGGVAWLTGLISAIVLLVLILLIFCLVKRRKGGKYAVKVKEEKEVDYEARPMKDETFGEY
RSLESDGDEKRSDSQPSICDDSKLGSVDSLAEYGDSVDIQFNEDGSFIGQYSGRAAPPHG
FKGSDPTSPVDAAPPLPIVPSMSSILNRPS
NT seq
3873 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgtgcctcagcatcgctggaggggctattgggggcggggctccccacacctccct
ctcattctactcctttctttgtccttcctgctccccaagcgcccgtttgctgacggagcc
attcacatcccaaagcattataaagtacagaatcttttacagcctccacagatcacaaag
tttccaaaatcgatcaccgtcttttctcaagaggacgtcgacctgcactgcaatgcgttt
ggtgaccccacaccctccatccgatggagaaaaaatggagtcgaatttggaacagaacat
tcaggatctggaactctgcaaacgacagcagaggaggccgtggagaactatacaggaaac
taccgctgctacgcgtccaacatcctggggacggccatgacgcaggaggtcaaggtcatc
gtggaatcgagtcctgttattccaaagcgaaaaaagcagagtaaaaaagccttcgaaggc
gagagcatcgtcctgacctgcaaccctccacagagttccagtcctccgaagatccactgg
atggacttcacaatggtacatattaatcagagtgaccgagtaatgactgggctggatgga
aacctgtacttttccaacctgctgagtagtgacagtagagacgactacatctgcaacgct
cagtatccagctgccttgacaatcctcacggtgacggctgtccgtctctcagttctccca
aataatgatgtcgttcccggcaggaaaactgcactgttccgtcccgctggattgcagtcc
tccatcctagccctcaagggccagaacatcactctagaatgtattcccaaaggcctaccc
acccctgtggttgagtggaggaagaaggacggcaccctgaaggacgtgagcagccgactg
atgaaccacaaccgctggcttcactttggtaacatcagccaggaggatgacggggaatat
gaatgtaaagcctccaacagttttggtttcgccacacacacttttaccgtcacagtggaa
gcggctccttactgggtgaaagagccccagaaccacatgtattctccaggagaaaccgtt
cgcctcgactgtctggctgatggcagccccgcccccagcataacctggagcatcaatggc
caaccgctggcagaggtggacgaggacgcccgtcggagtataaccggcagctcactgatt
ctgagggacgtgagagtctctgacacggctgtgtatcagtgtgaagccaccaacaggcat
gggtctatcctgctcaatatcaacctgtttgttgtggagctcccgcctcagatcctctca
tctgatggggtggtgtaccgagtcattgagggcgctgacgtcaacctgcactgcgagtct
tttggctctcctcgacctcataccacatgggcacggggggatatggtttctctgcttttg
gatgcaagggcttcacttttcaccaacgggactattaggttgtccggtgtgagccgggaa
gacagtggaacgtacacgtgttctgttacacacacgaacatctccatcactgccaaccta
gaggttttcaaccaaaccataatctctgagggccccaaggacatccgtgttctggaagga
acgacagccttcctggactgtgatttctacaaagatcctcgacttctcgattctcacctc
gtatggaagagagatggagtcgaactgcaggagtcattgccagactacaggtataaaatc
tttgagaacggcaccctgaaaatgacaaaactgcatttaaacgacagtgccgactactcc
tgtgaggtcagcactcttctggaccatgtcactgccaagggctccatcactgttttagtg
ccaccgcactcccccaggtctttatctgtgtctggggtcggggccagcagggtcattctc
agatgggtagcaggaccctcacacaacagtcccatcacagagttcattgtggaggcagag
gagaaacttcacactggagaggggaaggccatttggaagaagtgggaaagagtttctgga
agtcacacccaaacacagctcactctgcgcccgttctgcacataccggttccggatcatt
gctgttaatgaaattggggaaagcaggccaagtgaacccacagaggaccatgttacacca
ccagcagttcctgacaaaaaccccactgatgtgagaagcgactccagagactctggaact
cttagcattacatggactaaagttgagaagcgcttccacaatggcgacagtttccactat
agggtcttttggcgagaagctgagggggcaggaacagaaacaaactggaaacacgaagat
gtctcatctccaccgttcctggtcgtaaacacaagtacctacaagcggtttgagatcaaa
gtccaggcccttaactccatcggaaaaggaccggagccagagacgaggattggatactct
gcagaggaaaaacctgaagattcacccactgaggtttcaactgtcgtaaagaactgcaca
gtggcagtgagatggaggccaccaaagagggtccgaggtctgcttaaggggttcaagatc
tatttcaggagtttgggtccccggagttctgagagccagaggtcttcaggcaaacaccac
catgtggtgcgaagagaaaaaccagagagaggaaaccacaaagacaagaagagctgggag
ctggaggtagagggggcggacacgtcaaaggaagttgacggtctgcgctggtactggcgg
tatgagctgtcggtcacggcattcaacagcaaaggggaggggcctccctcgcctccacac
cattttcagaccccagagggagttcctggtcctcctgccgctctgtggttcaaaagtcct
acagacacaactctagttctgcactggagtcctccgctggatgccaacggcgtactggtt
ggatatatggttcagtacaaggaagagagtcaagacagtccgatgcggatgcagatgatc
cacgatccctcggtgaatcacataaggttgaaggatctgaaccccagcagttattacagg
tttaaagtcatagcacaaacggtgattggggctggagagcccatcaaggccaggctggcc
actctacttgaaggagttcctccatcaaatgttactgttgatcccagtaacacatccttt
aatctgagctggacacctggagagcggaacaggaaccacgggtttcacatctactacatg
aagaagaatggagcagcaagtattcagtgggaggagtcggagatggtcaactccactcag
ggcttctactccctgacgggcctccaaccaggaacacagtatcatctcaagatcatgaaa
gggaacgacactcagtgggaagatgttctgtggactattggaccagtgccgtcagagatg
cccgggggcgtggcctggctgactggactcatcagtgccatcgtgctgctcgttctcatc
ctgctcatcttctgcctcgtcaagcgcagaaaaggaggcaaatacgcagttaaggtcaaa
gaagagaaggaggtggactatgaggctcggcccatgaaagatgaaacctttggagaatac
agatcgctggagagtgacggagatgagaagcgctcagacagccagccgtctatttgtgac
gacagcaaactggggagcgtggactctctggccgagtacggagacagtgtggatattcag
ttcaacgaggatggctccttcattggccagtacagcgggcgagcagccccccctcacggc
ttcaaaggctccgatccgacctcgcccgtcgatgctgctccgcctcttcctatcgttcca
tccatgtcgagcatcctcaaccggcccagctag
DBGET
integrated database retrieval system
