Oryzias melastigma (Indian medaka): 112159371
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Entry
112159371 CDS
T07439
Symbol
rbbp4
Name
(RefSeq) histone-binding protein RBBP4
KO
K10752
histone-binding protein RBBP4
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml03082
ATP-dependent chromatin remodeling
oml03083
Polycomb repressive complex
oml04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
112159371 (rbbp4)
03083 Polycomb repressive complex
112159371 (rbbp4)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
112159371 (rbbp4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oml03036
]
112159371 (rbbp4)
Chromosome and associated proteins [BR:
oml03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
112159371 (rbbp4)
Histone modification proteins
HAT complexes
HATB complex
112159371 (rbbp4)
HDAC complexes
Sin3A-HDAC complex
112159371 (rbbp4)
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
112159371 (rbbp4)
PRC2.2
112159371 (rbbp4)
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
112159371 (rbbp4)
Heterochromatin formation proteins
Other heterochromatin formation proteins
112159371 (rbbp4)
Chromatin remodeling factors
NuRD complex
112159371 (rbbp4)
NuRF complex
112159371 (rbbp4)
NuRF complex (fruit fly)
112159371 (rbbp4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR75_1st
Beta-prop_EML
EIF3I
WD40_MABP1-WDR62_2nd
WD_LRWD1
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
WD40_RFWD3
Beta-prop_DCAF12
ANAPC4_WD40
Beta-prop_RIG_1st
WD40_MABP1-WDR62_1st
eIF2A
Beta-prop_IFT140_1st
MIOS_WD40
Beta-prop_SPT8
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
112159371
NCBI-ProteinID:
XP_024149215
Ensembl:
ENSOMEG00000017035
UniProt:
A0A3B3CCU5
LinkDB
All DBs
Position
LG22:15923405..15927759
Genome browser
AA seq
424 aa
AA seq
DB search
MADKDAAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD
YSVHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIK
INHEGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPSKPDPSGECTPDLRLRGHQKEG
YGLSWNPNLSGCLLSASDDHTICLWDISTVPKEGKIVDAKTIFTGHTAVVEDVSWHLLHE
SLFGSVADDQKLMIWDTRSNNTSKPSHAVDAHTAEVNCLSFNPYSEFILATGSADKTVAL
WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAE
DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGAADS
EVQA
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggctgacaaagacgctgcatttgatgatgctgtggaggaaagagtaatcaatgaggag
tacaagatctggaagaagaacaccccttttctgtatgacttggtgatgacccacgctctg
gagtggcccagtctcactgctcagtggctcccagatgtcaccagaccagagggaaaggat
tacagcgtgcacaggctggttctggggacgcacacctctgatgagcagaaccacctcgtc
attgccagcgttcagcttccaaatgatgacgcccagtttgatgcctcacactatgacagc
gaaaaaggagagtttggaggctttggatctgtaagcggaaagattgagattgaaatcaag
atcaaccacgagggagaggtgaacagagcccgctacatgccccagaatccttgcatcatt
gcaaccaaaacacccacaagtgacgtgctggtcttcgattacacgaagcatccgtccaag
cctgatccttctggggaatgtaccccagatctgcgtctgaggggccaccagaaggaggga
tatggtctctcctggaacccaaacctcagtggatgccttctcagtgcttctgatgaccac
accatatgcttgtgggacatcagcacggtgcccaaagaggggaagatcgtggatgccaaa
accatctttacaggccacaccgctgtggtggaggacgtttcgtggcatctgctccatgaa
tcactttttggttctgttgcggatgaccagaaactcatgatctgggacacacggtcgaac
aacacctccaaacccagccacgcggtggacgcccacaccgctgaggtcaactgtctgtct
tttaatccctacagtgagttcattctggccacaggctctgctgacaagactgtggctctt
tgggacctgaggaacctgaagctgaagctccactcctttgagtctcacaaagatgagatc
ttccaggttcagtggtctcctcataacgaaaccatcctcgcctccagcggaacagacagg
cggctcaacgtttgggacctcagtaagatcggggaggagcagtcacctgaggatgctgag
gatgggcctcctgagctgctgttcatccatggaggacacacagccaagatctcggacttc
tcctggaacccgaacgagccgtgggtcatctgttctgtatccgaggacaacatcatgcaa
gtgtggcagatggctgaaaatatctacaacgacgaggacccagagggtgccgcagattct
gaagtccaggcatga
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integrated database retrieval system