Oryzias melastigma (Indian medaka): 112159387
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Entry
112159387 CDS
T07439
Symbol
cacna1db
Name
(RefSeq) voltage-dependent L-type calcium channel subunit alpha-1D isoform X1
KO
K04851
voltage-dependent calcium channel L type alpha-1D
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04010
MAPK signaling pathway
oml04020
Calcium signaling pathway
oml04218
Cellular senescence
oml04260
Cardiac muscle contraction
oml04261
Adrenergic signaling in cardiomyocytes
oml04270
Vascular smooth muscle contraction
oml04530
Tight junction
oml04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
112159387 (cacna1db)
04020 Calcium signaling pathway
112159387 (cacna1db)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
112159387 (cacna1db)
09144 Cellular community - eukaryotes
04530 Tight junction
112159387 (cacna1db)
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
112159387 (cacna1db)
09153 Circulatory system
04260 Cardiac muscle contraction
112159387 (cacna1db)
04261 Adrenergic signaling in cardiomyocytes
112159387 (cacna1db)
04270 Vascular smooth muscle contraction
112159387 (cacna1db)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oml04040
]
112159387 (cacna1db)
Ion channels [BR:
oml04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
112159387 (cacna1db)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
CAC1F_C
PKD_channel
PFF1_TM
Motif
Other DBs
NCBI-GeneID:
112159387
NCBI-ProteinID:
XP_036068539
Ensembl:
ENSOMEG00000006777
LinkDB
All DBs
Position
LG7:complement(3223078..3304774)
Genome browser
AA seq
2253 aa
AA seq
DB search
MQEADEQSEGAQHANNNRTTASTDSSALWSESHTHLQQLPSPEPLQPPASTGKPVGSAHG
LLGANSSIQGPGGAGSAVSPVLAWHAAITAARQAQEDVEKPEISSRPSVCPSGPPPVGSL
AQRKRQQYAKSKKQGGSTNSRPPRALFCLTLNNPIRRACISLVEWKPFDIFILLSIFANC
VALAIYIPFPGDDSNSTNQELEKVEYAFLIIFTIETFMKIIAYGLVMHQNSYVRNGWNML
DFVIVIVGLFSVVLEMITKDADHGGQSGGKPGGFDVKALRAFRVLRPLRLVSGVPSLQVV
LNSIIKAMVPLLHIALLVLFVIIIYAIIGLELFIGKMHATCYVIQTGALAEEEPAPCAVS
GHGRHCLFNGTICREGWQGPNNGITNFDNFLFAMLTVFQCITMEGWTDVLYWMNDAMGFE
LPWVYFVSLVIFGSFFVLNLVLGVLSGEFSKEREKAKARGDFQKLREKQQLEEDLKGYLD
WITQAEDIDPENEEEGDEEGKRNRVTLADLTEKKKGKFGWFTQSTETQASVPTSETESVN
TDNHNGEEDKSPCCGPLCQKITKSKCSRQWRRWNRLCRRKCRAAVKSVTFYWLVIILVFL
NTLTIASEHYNQPDWLTEVQDVANKVLLALFTLEMLVKMYSLGLQAYFVSLFNRFDCFVV
CGGIVETILVELAIMSPLGISVFRCVRLLRIFKVTRHWASLSNLVASLLNSMKSIASLLL
LLFLFIIIFSLLGMQLFGGKFNFDETVTKRSTFDNFPQALLTVFQILTGEDWNTVMYDGI
MAYGGPASSGMVVCIYFIILFICGNYILLNVFLAIAVDNLADAESLNTAQKEEEEAKKRR
NSTKETSSDRKRVEITEGAPDSKVPTETLLEGDKESYPAAESPGDDEDDDDNNDILPEVP
SGPRPQRLSELTIKEKTPPIPEGSAFFIFSSTNPFRVFCHKLINHQIFTNLILVFIMLSS
VSLAAEDPIRNFSARNIILGYFDYAFTAIFTVEILLKILGYADYVFTSMFTFEILIKMTA
FGAFLHKGAFCRNYFNLLDLLVVGVSLVSFGIQSSAISVVKILRVLRVLRPLRAINRAKG
LKHVVQCVFVAIRTIGNIMIVTTLLQFMFACIGVQLFKGKFYRCTDDAKSSPEECKGTYI
LYSNGDTALPMIKERIWYNSDFNFDNVLMAMMALFTVSTFEGWPTLLYKAIDSNRENMGP
IYNYRIEISIFFIIYIIIIAFFMMNIFVGFVIVTFQEQGEKEYKNCELDKNQRQCVEYAL
KARPLRRYIPKNPYQYKFWYVVNSTGFEYVMFVLIILNTLCLAIQHYGQSHLFNYAMDIL
NMVFTGVFTVEMILKLVAFKPRGYVGDAWNVFDALVVIGSVVDIILSQSTAIPVVKVIVE
PGNTEDSARISITFFRLFRVMRLVKLLSRGEGIRTLLWTFIKSFQALPYVALLIAMLFFI
YAVIGMQVFGKIAMVDGTQINRNNNFQTFPQAVLMLFRCATGEAWQEIMLACLPGKLCDS
ESDYNPGEERTCGSGFAIIYFISFYMLCAFLIINLFVAVIMDNFDYLTRDWSILGPHHLD
EFKRIWSEYDPEAKGRIKHLDVVTLLRRIQPPLGFGKLCPHRVACKRLVAMNMPLNSDGT
VMFNATLFALVRTALRIKTEGNLDQANEELRVVIKKIWKRTSMKLLDQVVPPAGDDEVTV
GKFYATFLIQDYFRKFKRRKEQGLVGRRSWERLNTTLALQAGLRTLHDIGPEIRRAISCD
LQEEGLVDVTAEEEEEIYRRNGGLFGNHVNCVSGDQQGSHPPTTVTQRPLQILPFSCSAA
VAPTQNNRTAGREEEEEYNHHQTPLPDGSPRCNFTVHRSPIPSNANLNNANVPSLLSTTP
GGQQKCLLQRSCPSSTRNRSPSSYSKAVHNKLWKSHSTSRTRYYEAYVRSQGSVRGLHPT
IRREEPGSTNSDDERGSGDYFSGDEFHEDDIMLTRDRLICMDYSDEAEGDYEVFRDACQP
DGFYDDDDKQLICQQERRSPRRWFLPSPQACNTPTFSFECLRRRTSIDDAPSSPSCTALP
LHLMQQQVMAVAGMDASRISRPSPTRSLRSWATPPASPHSRDCSPCYTPLIQVDWRSSGS
VGSIPGLVKRSSWYTDSQDGAHSCCHSPSRLQLPAENCTHVLQKRGSANSLVEAVLISEG
LGKYARDPRFVSVTKHEIADACEMTIDEMESAASNLLNGSMANGSSEGAGNTGSDSGTQQ
RDHSVRDYSDEEPYVAVRCEEDLKDEMICITSL
NT seq
6762 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaagcagatgaacagtctgaaggggcacaacatgccaacaacaatcggaccact
gcctccacagactcctcggctctctggtcagaaagccacacccatctgcagcagctcccc
tcaccagagcccctccagcccccggcgagcaccggcaagccggttgggtccgctcacggc
ctcctcggggccaacagtagtattcaaggcccaggaggtgccggttccgctgttagcccg
gttctcgcttggcacgctgccatcaccgctgctcgacaggcacaggaagacgtcgagaag
ccagagataagttcccggccctcagtttgccccagtggacctcctcccgtgggatcactg
gcacaaaggaaaaggcagcagtatgccaaaagcaaaaaacaaggaggatcaaccaacagc
cggccacccagagccctgttctgcctcacactcaacaaccccattcgcagggcctgcatc
agcctggtggagtggaaaccgtttgatatctttatactgctgtctatttttgccaactgt
gtggccttagccatctacatccccttccctggagatgactccaactccaccaaccaggaa
ctggagaaagtagaatatgccttcctgatcatcttcacaatagaaacatttatgaagatc
attgcctatggcttggtgatgcaccaaaactcctacgtcagaaacggctggaacatgctg
gattttgtcattgtcattgtggggttgttcagtgtggttttggagatgataaccaaagat
gctgaccacggcggccagtctggaggcaaaccagggggattcgatgtgaaagcactgcgg
gccttccgcgtgctgcgaccccttcgtctcgtttctggtgttcccagtttacaggtggtt
ttaaattccattattaaagccatggttcccctgcttcacatagctctgctggtcctgttc
gtcatcatcatctacgccatcatcggcctcgagctcttcattggaaaaatgcacgccacg
tgctatgtgatacaaacaggtgcacttgcagaggaagagccggcgccgtgtgctgtgtcg
gggcacggacgccattgtctgttcaacggtacaatttgtcgagagggctggcagggtccc
aacaacggcatcacaaactttgacaattttttgtttgccatgctcactgtgttccagtgc
atcacaatggaaggctggaccgatgttctgtactggatgaatgacgccatgggctttgag
ctgccatgggtctactttgtcagtttggtcatctttggctccttctttgttcttaacttg
gttttgggagtgttaagtggtgagttttccaaagagcgagaaaaggccaaggctcgaggc
gatttccagaagctgcgggagaagcagcagttggaggaagaccttaagggctacttggac
tggatcacacaggctgaggacatcgaccccgagaacgaggaggaaggagacgaggaaggc
aagcgtaatcgggtcacgctggctgacctcacagagaagaagaagggaaagtttggctgg
ttcactcagtccacagagacacaggcgagcgtgccgacgagcgagactgaatctgtgaac
acggataaccacaatggagaggaggacaaatcgccgtgctgtggaccgctgtgtcagaaa
attactaagtcaaagtgcagtcgtcagtggcgacgctggaaccgtctgtgccgcaggaag
tgccgtgcagctgtcaaatccgtgacgttttattggctggtcatcatcttggtcttcctc
aacactctcaccatcgcctctgagcactacaaccaaccagactggctgactgaagtccag
gacgtagccaacaaagttctcctggctctgttcaccttggagatgctggtgaagatgtac
agtttggggctgcaggcctactttgtgtccctgtttaaccgctttgactgcttcgtggtg
tgtggaggcatcgtggaaaccatcctggtggagctggccatcatgtctcctctggggatc
tctgttttccgctgcgtgcgcctcctcagaatcttcaaagtaacacgacactgggcgtct
ctcagtaacctggttgcctcgctgctcaactccatgaagtccattgcctctttgttgctg
ctgctcttcctcttcatcattattttttccctgcttgggatgcaactctttggaggcaag
ttcaactttgatgagacggtgaccaaaagaagcacatttgataacttcccacaagccctg
ctcaccgtgttccagattctgactggagaagactggaacacagtgatgtatgatggcatc
atggcatacgggggacccgcctcctctggaatggtggtctgcatttactttatcatcctc
ttcatttgtgggaactacatcttgctgaatgtctttttggctattgctgttgataacctg
gccgacgcagagagcctcaacacggcgcaaaaggaggaagaagaggccaagaagaggagg
aatagtaccaaggaaacaagctcagacaggaaaagggttgagataacggaaggagctccc
gactcaaaggttccaacagaaaccttgctagagggagacaaagagtcgtatcctgctgct
gaatctccaggagatgatgaggatgatgacgacaataacgacattctcccagaagtccca
tccggaccccgcccccaacggctctctgaactcaccatcaaagaaaagactccgcccata
cctgaaggcagcgccttcttcatcttcagcagcaccaacccctttcgagtattctgccac
aaactgatcaaccatcagatcttcaccaacctcatcctggtgttcatcatgctcagctcc
gtttctttggctgctgaagatcccatccgcaacttctctgctcgtaacattatacttggt
tattttgactatgctttcaccgcaatctttacagttgagatcctgttgaagatcctaggc
tatgcagactatgtcttcactagtatgtttacatttgagatccttattaagatgacagcg
ttcggagcctttcttcataagggggccttctgcaggaactacttcaaccttcttgacttg
ctggttgtcggcgtgtctctggtgtcttttggtatccaatcctcagccatctcagtggtg
aagattctccgcgttttacgtgttctccgtccactcagggccatcaacagagccaagggg
cttaagcacgtggtgcagtgtgtgtttgttgccatcaggaccatcggtaacatcatgatc
gtcaccacgctgctgcagttcatgttcgcttgtattggagtgcagctcttcaagggaaaa
ttctatcgatgcacagatgatgcaaagtccagcccagaggaatgcaaaggaacatacatt
ctttacagcaatggggacacagcactacccatgattaaagagaggatttggtacaacagt
gactttaattttgataacgttctcatggccatgatggctcttttcaccgtctccaccttt
gagggatggcccacgcttttgtacaaggccatcgattctaacagggaaaacatgggtccc
atctacaactaccgcatcgagatctccatcttcttcatcatctatatcatcatcatcgcc
ttcttcatgatgaacatcttcgtgggttttgtcatcgtcacctttcaggagcagggggag
aaggaatacaagaactgtgaactggacaaaaaccagcgccagtgcgtggaatacgctctg
aaagctcgccccttgcgtcgctacattcccaaaaacccctaccagtacaagttctggtat
gtggtcaactccactggcttcgaatatgtcatgtttgtcctgatcatccttaacaccttg
tgtctggctatccagcactatggtcagtctcatctgtttaactacgccatggatatcctc
aacatggtctttactggggttttcacagtagagatgatcctgaagctcgtcgcctttaaa
cccagaggttatgtcggggacgcctggaatgtcttcgacgctctggtggtgattggcagt
gtagtcgacatcatactcagccagtcaacagccattcctgttgtgaaggtgatagtggag
ccagggaacacagaggacagcgctcgcatctccatcaccttcttccgcctcttcagggtg
atgcggctggtcaaactgctgagcagaggggaggggatccggactttgctgtggaccttc
atcaaatccttccaggcgcttccatatgtcgcccttttgattgcgatgctgttcttcatc
tacgctgtgattggaatgcaggtgtttggaaaaattgcaatggtggatgggacccaaatt
aaccgcaacaacaattttcaaacttttcctcaagctgtcctgatgctcttcaggtgtgcc
acaggagaggcgtggcaggagatcatgctggcttgtctgccaggaaagctgtgtgactct
gagtccgactataaccctggagaggagagaacctgcggcagtggctttgccatcatctac
ttcatcagcttctacatgctttgtgctttcttgattatcaacctttttgtagctgtcatc
atggacaactttgattacctgactcgtgattggtccatcctggggccgcaccacctggac
gagttcaaaaggatctggtcagaatacgatccggaggccaagggcaggataaagcatctt
gatgtggtaactcttctgcggaggattcagcctcctctgggctttgggaagctctgccct
cacagagtggcctgtaagcggctggttgccatgaacatgcccctcaacagtgacgggact
gtcatgtttaatgccaccttgtttgctttggttcgcaccgctctcaggatcaaaactgag
ggtaacttggatcaagcaaatgaggagctgcgagttgttattaagaagatctggaaaagg
accagtatgaaactcctggatcaagtggtgcctcccgcaggtgatgacgaggtaacagtg
gggaagttctatgccaccttcctgatacaggactactttagaaagttcaagaggcgcaaa
gagcaagggctcgtgggaagacgatcgtgggagaggctgaatactactttggctctgcag
gccggcttgcgcactctccatgacattggaccagaaatccgtcgagccatatcatgtgac
ctgcaggaggaggggctagtagatgtaactgcagaagaagaagaggaaatctacaggcgc
aatggtggcctttttggaaaccacgttaactgtgtgagtggggaccagcagggctcccac
ccccccaccactgtcactcagcgcccgctgcagatcctgccgttttcctgcagtgctgca
gtcgcacccacccagaataacagaaccgctggcagagaagaagaggaggagtataaccat
catcaaactcctctgcccgacgggtcccctcgctgtaacttcacggtccatcgatccccg
ataccctccaacgccaacctcaataatgccaatgtgccctcgctactctcaactacacct
ggggggcagcagaagtgtttattgcagagaagttgcccgtcctccacccggaacagatcc
cccagctcgtacagcaaagcagtgcacaacaaactgtggaagtctcactccaccagcagg
acacgctactatgaagcatacgtcagatcacaaggaagtgtcagagggcttcacccaacc
attcgccgagaggagcctgggagtacaaacagcgacgatgagcgaggttcaggggactac
ttcagcggtgacgaattccatgaagatgacatcatgctcacaagggacagactgatctgc
atggactatagtgatgaagccgagggagattatgaggttttcagggatgcatgtcagcct
gatggtttctatgacgacgatgacaaacagcttatctgccaacaagaaagacgatcaccg
agacgatggtttttaccctctcctcaagcatgcaacacgccaacatttagttttgagtgt
cttcgcagaaggactagtatagatgatgctccctcctccccatcatgcaccgctcttcca
ctccacctgatgcagcaacaggtgatggcagtagctggtatggatgccagcagaatttca
cgaccgtctccgacgaggtcgcttcgctcttgggcgactcctccagcctccccccacagt
cgtgactgctctccctgctacacgccactcatacaggtggactggcgaagctccggcagt
gtgggaagcatccctggtttagtgaagaggagctcttggtacacagacagccaggacggc
gctcacagctgctgccactctccatcacgcctgcagcttcctgcagaaaactgcacacac
gtcctgcagaagagaggcagtgctaacagtctggtggaagctgtgctgatctctgagggt
ttagggaaatatgccagggaccccagattcgtgtctgtgaccaaacatgagatcgctgac
gcctgtgagatgaccatcgatgaaatggagagtgcagccagtaacctgctgaatggcagt
atggcgaacggcagcagcgaaggagcgggcaacactggttcagactctggcacacagcag
agggaccacagcgtgcgcgactatagcgacgaggagccgtacgtggccgtcagatgcgag
gaggacttaaaagatgagatgatatgcatcacttcactatag
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integrated database retrieval system
