Oryzias melastigma (Indian medaka): 112159425
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Entry
112159425 CDS
T07439
Symbol
prdm2a
Name
(RefSeq) PR domain zinc finger protein 2
KO
K11432
[histone H3]-lysine9 N-trimethyltransferase PRDM2 [EC:
2.1.1.355
]
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml00310
Lysine degradation
oml01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
112159425 (prdm2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oml03000
]
112159425 (prdm2a)
03036 Chromosome and associated proteins [BR:
oml03036
]
112159425 (prdm2a)
Enzymes [BR:
oml01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
112159425 (prdm2a)
Transcription factors [BR:
oml03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
112159425 (prdm2a)
Chromosome and associated proteins [BR:
oml03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
112159425 (prdm2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-C2HE
zf-C2H2_jaz
zf-C2H2_6
Zn_Ribbon_YjdM
zf-C2H2_8
Zf-C2H2_ZNF451_C
zf-C2H2_ZNF462_1st
Motif
Other DBs
NCBI-GeneID:
112159425
NCBI-ProteinID:
XP_024149235
LinkDB
All DBs
Position
LG7:complement(4616860..4625921)
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AA seq
1194 aa
AA seq
DB search
MSELKHHQDLEEEEFSHQEERDMTSDCTDPYMSLIQSAVRESLFCHICEKHFTNSQELEQ
HACSDKTLSSNVNHLWDEERDPLVSTGSVIQQNEPEVHKEKLCFFLKDNSQILVKDASEL
QTQPGKHEEPAEQNMLNISSNISEDLTFYIDGKMVSTSNCEVSEGHCESSAVVGLDVLTG
NPTQISSEPKTRTELESEIASSPSSFVSPLIENSSLNSESTEEQKQRAGLLPHNRSQEGL
NPSLTVITDGQKPSSPVSFSVLPSGRFKRRTSSPTTFPNTDESVAVPDAGDVVSVNTGLQ
GSCTQHTTSDNMIPCVGEQAPKPVLMDTRPSVTGGNSCNQRPLDLSNTVKTNDSAALDLS
LQKSIPGGSELALHLGKKAVKETGKGGLEPPMITLVTASDIVTPVEPVPEGLVYGLTLSP
PSLAPPSASLAPIALESASPCTIAFASPVAHAMLPTAPSLITVLAPPPVSNQPIQVMAPN
ISPEPMVICTENPLNSPCDLAAAFATTNSANIVTLSQPLNPALHLPGHVLLDSSPVSEVP
LAPSVNLTDSLFSSYNIASNAVLIECTIALDGPRAVVPAAVNPQEKAADFPIPTQLVVNQ
MKLPNLETVDPSIPVSSTAESLPLSADTEATSGTSIVRDSSSDAEPDANPESPAGKDEDA
ADESVAVSENAPEIASSPAEKAAEPSHNTTDVQEEQTFTKNFICNVCDKLFHSMKELGHH
VGDHADEWPYKCEFCVLLFGKPSALLDHRSSLHGVGKTYVCSACTKEFVYLCNLKQHQEE
LHPGQSCTYTEDEKGKLRPQNYNNSTKVNTDPLAAKSLQEPSDVVKKEKSEVDVAAEELF
TTIKIMASDGGKVKGPDVRLGIYQHYPSFKPPPFPYHNRSPAGSVASATNFTTHNIPQTF
TTAIRCTKCGKSFDNMPELHNHILACANASDKRRYTPRKNPVPLRHFSKSQNGVLWISSN
GLKASIRVSPASRSKPGQEAPVKLRILSKKKKKLVQRVMPQRNKSVSSSNKASSPQVESQ
QEVFVCPHCSREFTMRRSRTKHMAVCPKKPAEVTKRKEGGISVTKENDHLHRGVSRVNDK
QSSPPHKTRHQTSGSAKRHAILPVQAVFPSKRSKISIKELAEPKQESPTLTEIPIRTFNP
SMRQYSRMQQNVRVPVKISVVRPQQTVQERDAPTPSKEEAGRAVTRLSEQSTSV
NT seq
3585 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagcttaaacaccatcaagatttggaagaggaggaattcagtcaccaagaagaa
cgagacatgacgtccgactgcactgacccttacatgagcctcatccaaagtgcagttaga
gagtcacttttctgccacatctgtgaaaaacatttcaccaacagtcaagaattggaacaa
catgcttgctctgataaaacattgagttcaaatgttaatcatttgtgggacgaggaaaga
gatcctctggtttcaactggatcagtcatacagcaaaatgagccagaggtgcacaaggaa
aaattatgttttttcctcaaagacaattctcagattttggtcaaggacgcatctgagctt
caaacacaacctggaaagcatgaagaacctgcagagcagaatatgctcaacatctctagc
aacatttcagaggatcttactttttacattgatggaaaaatggtgtcaaccagtaactgt
gaagtatctgagggtcactgtgagtcttcagcagtagttggacttgatgttcttactgga
aatccaacccagatcagcagtgaacccaaaactagaactgaactggagtctgaaattgca
tcatcaccatcatcttttgtttctcctttaatagaaaactcatctctaaattccgagtct
acagaggaacagaaacaaagggcagggttactgcctcataaccggagtcaggaaggtctg
aacccctctctcactgtcatcacagacggccagaagccatcctcacccgtctctttctct
gtcctgccgtctggaaggtttaaaagaagaacaagttctccaacaaccttcccaaataca
gatgaatcagtagcggtcccagatgctggtgatgttgtttctgtaaatacaggactgcag
ggttcatgtactcagcataccacgagtgacaatatgattccatgtgtgggagagcaggca
cctaaaccggttttgatggacaccaggccttctgtaaccggcgggaattcatgcaaccag
cgcccgctggacctgtcgaacaccgtcaaaacaaatgactccgctgctttggatttgagt
ttgcagaaaagcatccccggtggatccgaactggcgttacatttaggtaaaaaggctgta
aaggaaactggaaaaggaggtctggaacctccgatgatcactttagtaacggcttcagac
attgtgaccccagtggagcctgttcctgaaggcctcgtttacgggctcaccctgtccccg
ccttccctagctccgccctccgcctccctcgctcccattgctttggagtcggcttcaccg
tgcacaatagcgtttgcttccccggtcgctcacgctatgcttcccaccgcgccctcctta
atcacagttttagcccctccacctgtttccaaccagccaattcaggtgatggcccccaac
atatcccccgagcccatggtgatctgcacagaaaacccgttaaactccccgtgtgactta
gctgctgcatttgccacaacaaactctgcaaacatcgttactctttcacaacccctcaat
cctgctcttcacctacccggccatgtgcttctcgactcctccccggtgtcagaggtgccc
ctcgctccctccgtcaatttaaccgactccttgtttagttcatacaacattgccagcaac
gcagtgttgatcgagtgcacgatagctctcgatggtccgagggctgtcgttcctgctgcg
gttaacccccaagagaaggccgcggactttcccattccaacacagttggttgtaaatcaa
atgaaactgcccaaccttgaaactgtcgaccccagcattcccgtgtcctccactgcagaa
tctttacctctgtctgctgacacagaggcgacgtctgggacttctattgtcagagactcc
agctctgatgcagaacctgatgctaacccggagtcacctgctggaaaagatgaggacgcc
gctgacgaatctgttgccgtgtcagaaaatgccccggaaattgcttcttctccggcagaa
aaagctgcagaaccatctcataatacaacagatgtgcaagaagagcagacctttacaaag
aacttcatctgtaatgtgtgcgataagcttttccattcaatgaaagaactaggccatcat
gtgggtgaccatgctgatgaatggccttacaaatgtgagttctgcgtgctgctctttggc
aaaccctccgctctgctcgaccatcgatcaagcctccacggcgtcggaaagacttacgtc
tgcagcgcttgcactaaagaattcgtctacctttgcaatcttaaacagcatcaagaagaa
ttgcatcccggtcagtcgtgtacgtacactgaagatgaaaagggaaaacttagacctcaa
aactacaacaactccactaaagtcaacacagatcctctggcggccaagtctctacaggag
cccagcgacgtggtgaaaaaggaaaaaagtgaagtggatgtggctgctgaagagcttttt
acaaccattaagataatggcttcagatggtggcaaagtcaaagggcccgatgtccgactt
ggcatttaccagcattatcccagcttcaagccgcctccttttccttatcacaacagatca
cctgctggttcagtcgcttctgccacaaacttcacaacccacaacatcccacagactttc
actacggctatcaggtgcaccaaatgcggcaaaagctttgacaacatgccagaactacac
aaccacatcttggcatgcgcaaatgctagcgacaaaaggcgatacacgccgaggaaaaac
cccgtccctttacgacacttttcaaaatctcagaatggggtcctttggatttcctccaac
ggattaaaggcttcaattagagttagtccggcaagcaggtctaaacccggtcaagaagcg
ccggtaaagttaagaatactgagcaaaaagaagaaaaagttggtgcaaagagtgatgccg
cagaggaacaagtctgtctcctcttcaaacaaagcgtcttctccacaggtggagagccag
caggaggtctttgtctgtcctcactgtagcagggagttcacaatgcggcgcagtcgaacc
aaacacatggcggtctgccccaagaaacccgcagaggtgacaaaaaggaaagaaggagga
atctccgtcacaaaggagaatgatcatcttcatcgaggagtctctcgtgtgaatgacaaa
cagtcgtcaccgccacataaaaccagacaccaaacctctggctctgcaaagaggcacgcc
atcctaccggtacaagctgtcttcccaagcaaaagaagtaaaatcagcataaaagagctc
gccgagccaaagcaggagtcgcccacgctgacagaaatcccaattcgcactttcaaccct
tccatgcggcagtacagcagaatgcagcagaacgtccgagtacccgttaagatctcagtg
gtgaggcctcaacagactgtacaggagagagacgctccaactccaagcaaagaggaagca
ggcagagccgttaccaggctctccgagcagagcacgtcagtgtga
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integrated database retrieval system