KEGG   Oryzias melastigma (Indian medaka): 112159425
Entry
112159425         CDS       T07439                                 
Symbol
prdm2a
Name
(RefSeq) PR domain zinc finger protein 2
  KO
K11432  [histone H3]-lysine9 N-trimethyltransferase PRDM2 [EC:2.1.1.355]
Organism
oml  Oryzias melastigma (Indian medaka)
Pathway
oml00310  Lysine degradation
oml01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:oml00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00310 Lysine degradation
    112159425 (prdm2a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:oml03000]
    112159425 (prdm2a)
   03036 Chromosome and associated proteins [BR:oml03036]
    112159425 (prdm2a)
Enzymes [BR:oml01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.355  [histone H3]-lysine9 N-trimethyltransferase
     112159425 (prdm2a)
Transcription factors [BR:oml03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 PRDM
    112159425 (prdm2a)
Chromosome and associated proteins [BR:oml03036]
 Eukaryotic type
  Histone modification proteins
   HMTs (histone methyltransferases)
    HKMTs (histone lysine methyltransferases)
     112159425 (prdm2a)
SSDB
Motif
Pfam: zf-C2H2 zf-C2H2_4 zf-C2HE zf-C2H2_jaz zf-C2H2_6 Zn_Ribbon_YjdM zf-C2H2_8 Zf-C2H2_ZNF451_C zf-C2H2_ZNF462_1st
Other DBs
NCBI-GeneID: 112159425
NCBI-ProteinID: XP_024149235
LinkDB
Position
LG7:complement(4616860..4625921)
AA seq 1194 aa
MSELKHHQDLEEEEFSHQEERDMTSDCTDPYMSLIQSAVRESLFCHICEKHFTNSQELEQ
HACSDKTLSSNVNHLWDEERDPLVSTGSVIQQNEPEVHKEKLCFFLKDNSQILVKDASEL
QTQPGKHEEPAEQNMLNISSNISEDLTFYIDGKMVSTSNCEVSEGHCESSAVVGLDVLTG
NPTQISSEPKTRTELESEIASSPSSFVSPLIENSSLNSESTEEQKQRAGLLPHNRSQEGL
NPSLTVITDGQKPSSPVSFSVLPSGRFKRRTSSPTTFPNTDESVAVPDAGDVVSVNTGLQ
GSCTQHTTSDNMIPCVGEQAPKPVLMDTRPSVTGGNSCNQRPLDLSNTVKTNDSAALDLS
LQKSIPGGSELALHLGKKAVKETGKGGLEPPMITLVTASDIVTPVEPVPEGLVYGLTLSP
PSLAPPSASLAPIALESASPCTIAFASPVAHAMLPTAPSLITVLAPPPVSNQPIQVMAPN
ISPEPMVICTENPLNSPCDLAAAFATTNSANIVTLSQPLNPALHLPGHVLLDSSPVSEVP
LAPSVNLTDSLFSSYNIASNAVLIECTIALDGPRAVVPAAVNPQEKAADFPIPTQLVVNQ
MKLPNLETVDPSIPVSSTAESLPLSADTEATSGTSIVRDSSSDAEPDANPESPAGKDEDA
ADESVAVSENAPEIASSPAEKAAEPSHNTTDVQEEQTFTKNFICNVCDKLFHSMKELGHH
VGDHADEWPYKCEFCVLLFGKPSALLDHRSSLHGVGKTYVCSACTKEFVYLCNLKQHQEE
LHPGQSCTYTEDEKGKLRPQNYNNSTKVNTDPLAAKSLQEPSDVVKKEKSEVDVAAEELF
TTIKIMASDGGKVKGPDVRLGIYQHYPSFKPPPFPYHNRSPAGSVASATNFTTHNIPQTF
TTAIRCTKCGKSFDNMPELHNHILACANASDKRRYTPRKNPVPLRHFSKSQNGVLWISSN
GLKASIRVSPASRSKPGQEAPVKLRILSKKKKKLVQRVMPQRNKSVSSSNKASSPQVESQ
QEVFVCPHCSREFTMRRSRTKHMAVCPKKPAEVTKRKEGGISVTKENDHLHRGVSRVNDK
QSSPPHKTRHQTSGSAKRHAILPVQAVFPSKRSKISIKELAEPKQESPTLTEIPIRTFNP
SMRQYSRMQQNVRVPVKISVVRPQQTVQERDAPTPSKEEAGRAVTRLSEQSTSV
NT seq 3585 nt   +upstreamnt  +downstreamnt
atgtctgagcttaaacaccatcaagatttggaagaggaggaattcagtcaccaagaagaa
cgagacatgacgtccgactgcactgacccttacatgagcctcatccaaagtgcagttaga
gagtcacttttctgccacatctgtgaaaaacatttcaccaacagtcaagaattggaacaa
catgcttgctctgataaaacattgagttcaaatgttaatcatttgtgggacgaggaaaga
gatcctctggtttcaactggatcagtcatacagcaaaatgagccagaggtgcacaaggaa
aaattatgttttttcctcaaagacaattctcagattttggtcaaggacgcatctgagctt
caaacacaacctggaaagcatgaagaacctgcagagcagaatatgctcaacatctctagc
aacatttcagaggatcttactttttacattgatggaaaaatggtgtcaaccagtaactgt
gaagtatctgagggtcactgtgagtcttcagcagtagttggacttgatgttcttactgga
aatccaacccagatcagcagtgaacccaaaactagaactgaactggagtctgaaattgca
tcatcaccatcatcttttgtttctcctttaatagaaaactcatctctaaattccgagtct
acagaggaacagaaacaaagggcagggttactgcctcataaccggagtcaggaaggtctg
aacccctctctcactgtcatcacagacggccagaagccatcctcacccgtctctttctct
gtcctgccgtctggaaggtttaaaagaagaacaagttctccaacaaccttcccaaataca
gatgaatcagtagcggtcccagatgctggtgatgttgtttctgtaaatacaggactgcag
ggttcatgtactcagcataccacgagtgacaatatgattccatgtgtgggagagcaggca
cctaaaccggttttgatggacaccaggccttctgtaaccggcgggaattcatgcaaccag
cgcccgctggacctgtcgaacaccgtcaaaacaaatgactccgctgctttggatttgagt
ttgcagaaaagcatccccggtggatccgaactggcgttacatttaggtaaaaaggctgta
aaggaaactggaaaaggaggtctggaacctccgatgatcactttagtaacggcttcagac
attgtgaccccagtggagcctgttcctgaaggcctcgtttacgggctcaccctgtccccg
ccttccctagctccgccctccgcctccctcgctcccattgctttggagtcggcttcaccg
tgcacaatagcgtttgcttccccggtcgctcacgctatgcttcccaccgcgccctcctta
atcacagttttagcccctccacctgtttccaaccagccaattcaggtgatggcccccaac
atatcccccgagcccatggtgatctgcacagaaaacccgttaaactccccgtgtgactta
gctgctgcatttgccacaacaaactctgcaaacatcgttactctttcacaacccctcaat
cctgctcttcacctacccggccatgtgcttctcgactcctccccggtgtcagaggtgccc
ctcgctccctccgtcaatttaaccgactccttgtttagttcatacaacattgccagcaac
gcagtgttgatcgagtgcacgatagctctcgatggtccgagggctgtcgttcctgctgcg
gttaacccccaagagaaggccgcggactttcccattccaacacagttggttgtaaatcaa
atgaaactgcccaaccttgaaactgtcgaccccagcattcccgtgtcctccactgcagaa
tctttacctctgtctgctgacacagaggcgacgtctgggacttctattgtcagagactcc
agctctgatgcagaacctgatgctaacccggagtcacctgctggaaaagatgaggacgcc
gctgacgaatctgttgccgtgtcagaaaatgccccggaaattgcttcttctccggcagaa
aaagctgcagaaccatctcataatacaacagatgtgcaagaagagcagacctttacaaag
aacttcatctgtaatgtgtgcgataagcttttccattcaatgaaagaactaggccatcat
gtgggtgaccatgctgatgaatggccttacaaatgtgagttctgcgtgctgctctttggc
aaaccctccgctctgctcgaccatcgatcaagcctccacggcgtcggaaagacttacgtc
tgcagcgcttgcactaaagaattcgtctacctttgcaatcttaaacagcatcaagaagaa
ttgcatcccggtcagtcgtgtacgtacactgaagatgaaaagggaaaacttagacctcaa
aactacaacaactccactaaagtcaacacagatcctctggcggccaagtctctacaggag
cccagcgacgtggtgaaaaaggaaaaaagtgaagtggatgtggctgctgaagagcttttt
acaaccattaagataatggcttcagatggtggcaaagtcaaagggcccgatgtccgactt
ggcatttaccagcattatcccagcttcaagccgcctccttttccttatcacaacagatca
cctgctggttcagtcgcttctgccacaaacttcacaacccacaacatcccacagactttc
actacggctatcaggtgcaccaaatgcggcaaaagctttgacaacatgccagaactacac
aaccacatcttggcatgcgcaaatgctagcgacaaaaggcgatacacgccgaggaaaaac
cccgtccctttacgacacttttcaaaatctcagaatggggtcctttggatttcctccaac
ggattaaaggcttcaattagagttagtccggcaagcaggtctaaacccggtcaagaagcg
ccggtaaagttaagaatactgagcaaaaagaagaaaaagttggtgcaaagagtgatgccg
cagaggaacaagtctgtctcctcttcaaacaaagcgtcttctccacaggtggagagccag
caggaggtctttgtctgtcctcactgtagcagggagttcacaatgcggcgcagtcgaacc
aaacacatggcggtctgccccaagaaacccgcagaggtgacaaaaaggaaagaaggagga
atctccgtcacaaaggagaatgatcatcttcatcgaggagtctctcgtgtgaatgacaaa
cagtcgtcaccgccacataaaaccagacaccaaacctctggctctgcaaagaggcacgcc
atcctaccggtacaagctgtcttcccaagcaaaagaagtaaaatcagcataaaagagctc
gccgagccaaagcaggagtcgcccacgctgacagaaatcccaattcgcactttcaaccct
tccatgcggcagtacagcagaatgcagcagaacgtccgagtacccgttaagatctcagtg
gtgaggcctcaacagactgtacaggagagagacgctccaactccaagcaaagaggaagca
ggcagagccgttaccaggctctccgagcagagcacgtcagtgtga

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