Oryzias melastigma (Indian medaka): 112159447
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Entry
112159447 CDS
T07439
Symbol
fgd
Name
(RefSeq) faciogenital dysplasia isoform X1
KO
K05722
FYVE, RhoGEF and PH domain containing 3
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
112159447 (fgd)
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Motif
Pfam:
RhoGEF
PH
SOS1_NGEF_PH
FYVE
RHG20_PH
FYVE_2
Motif
Other DBs
NCBI-GeneID:
112159447
NCBI-ProteinID:
XP_024149271
Ensembl:
ENSOMEG00000008487
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Position
LG7:complement(13364961..13426313)
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AA seq
895 aa
AA seq
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MQGVSAADLPASSLQYPHGPVNYLCSPRLAKKGPTPRPCHDRPAVKPRPQPSTRPPAAQK
PQVPPKPAHLLTLGQDKKPKKIPPAPSRPLPAPPLPPKPKLCPAPPCLGAQPQREAQKVG
LLIERFENSRVPILGVLPRSQLHLCLRMDPAPDVHSSCGSDTAAKVLGEPPLVSELELGL
AEKSQDASELSCLESMHISDSDNGVEDEIAHRVNCLEEKENSSSLKLLDNPNSSEQNGKI
PNRDSGIDSPSCAAECEVFPNEDAIDEEDHYDSVTETESVSCCVTQENKRDSTQDEDSDL
DEGSSSDIHSLTDTQIGYLTDVNSEAHKCSEAQKLLNIAKELLHTEEAYVKRLNLLDQVF
CTKLTEAGIPQDVITGIFSNISSIYCFHDKFLLPELKTRITGEWDSNPRIGDILQKLAPF
MKMYGEYVKNFDRAMDLVNTWTQRSSQFKSVVQNIQKQDVCGNLTLQHHMLEPVQRIPRY
ELLLKDYLKKLPSDAPDQKDAAKALELISTAANHSNAAIRKMEKMNKLLEVYERLGGEED
IVNPANELIKEGHIKKMSAKNGTAQDRYLYLFNNMVLYCVPKLRLMGQKFSVRERIDIAG
MEVQENVKQNLPHTFAIIGKQRSLELQARTAEEKEDWIQVIIATIERHKQNSETFNKAFI
SSFSREDDHVPDSPGPWLNSSIDSDGERVHERKSSRKKEKEKQTCKGCNESFNFTKRKHH
CKTCGAAICAKCSKTLDNKTSRVCPECFEACLTVENHTEQRRKAPPERQPSLTAENCLLC
GYLQVQEKGKSWTKMWVAVTKAEPLVLYLQSSAQDPKGSRGVPLQGLEVSLVPSGTADKP
DIKHMFRLSHAQQTFLLSAQDAELQTKWVDILSKAARGDPPTEAQSSLTEHRKSQ
NT seq
2688 nt
NT seq
+upstream
nt +downstream
nt
atgcagggggtttcggcagcggatctgccggcctcctctctgcaatatcctcacggaccc
gtgaactatctgtgttctcctcgactggccaagaaaggtccgactcccagaccatgtcat
gaccggcccgccgtcaaaccccgcccccagccctccaccagaccaccagcagctcagaaa
cctcaagtgccccctaaaccggcgcacctgctcacccttgggcaggacaagaaacctaag
aagatccccccagcgccttcgagacctctgccagcaccccctcttccccctaaaccaaag
ctttgtcccgcacctccttgccttggagcacagccacaaagagaggctcagaaggttgga
ctgctgattgagaggtttgaaaactcgagggtccccattttgggggtgctcccacgctcg
cagcttcacctgtgcctcagaatggatccggcacctgacgtccattcgtcctgcggctca
gacaccgctgcaaaggttttgggagagcccccgctcgtcagtgaactggaactaggcctc
gccgagaaaagccaggacgcgtcggaactctcctgcctggagtctatgcacatcagcgac
tcggacaacggcgtggaggacgaaatcgcacacagggtcaattgcctggaggagaaagag
aacagttcctccctcaaactcctggacaatccgaactcctctgaacagaacgggaagatt
cccaaccgggacagcggcattgacagcccgtcctgcgccgcggaatgcgaggtgtttccc
aacgaggacgccatcgatgaggaggaccactacgacagcgtcactgagacggagagtgtg
tcctgctgcgttacccaggaaaacaagcgggactcgacccaggacgaggacagtgactta
gacgaggggagcagcagcgacatacactcgctgacggacacacagatcggttatctgaca
gatgtgaactcggaggcccacaaatgctcggaggcgcagaagctgctgaacatcgccaaa
gagctcctccacactgaagaggcgtacgtgaaaagactcaacctcctcgatcaggtattt
tgcactaagctcacagaggctggaatccctcaggacgtcattacagggatcttctccaac
atctcttcaatctactgcttccacgataagttcctgctcccggagctcaagactcggatt
actggagaatgggactccaaccctcgcattggtgacattctccagaaactggctccgttc
atgaagatgtacggggaatatgtgaagaactttgaccgagccatggacctggtcaacacc
tggacgcagagatcctcacagttcaagagcgtcgttcagaacatccagaaacaggatgtc
tgtgggaacctgacgttgcagcaccacatgctggagccggtccagcgcattcctcgctat
gagctgctgctcaaagactacctgaaaaagctgcccagtgatgctcctgaccaaaaagat
gcagcaaaggcgctggagctgatctcaactgcagccaaccattccaacgcagccatcagg
aaaatggagaaaatgaacaaactgttggaggtctatgaaaggctcggaggggaggaagat
atagtcaatccagccaatgagctcatcaaagaaggacacatcaagaagatgtctgcaaaa
aatggaacagcacaagatcgatatctctacttgttcaacaatatggtgctgtactgcgtt
cctaagctcaggctgatggggcagaagtttagcgtcagagagaggatcgacattgctggc
atggaggttcaagagaatgtgaagcaaaaccttccccacacatttgccatcattggtaaa
cagcgttcactggagcttcaggccaggacagcggaggagaaggaagattggatacaggtg
atcatagccaccatcgaacggcacaaacagaacagtgaaaccttcaataaagctttcatc
agctccttctcccgcgaggacgaccatgtgccagactcaccgggcccatggctcaactca
tccatcgactcagatggtgaaagagtccatgaaaggaaaagttccaggaaaaaagagaaa
gaaaaacaaacttgcaaaggctgcaatgagagctttaatttcaccaagcgcaagcaccac
tgcaaaacgtgtggagcggccatctgtgcaaagtgttcaaagactttggacaacaaaaca
agccgagtgtgtcctgaatgtttcgaagcctgtctgactgtggagaatcacactgagcag
agaagaaaagctccaccagagaggcagccatcgctgacagcagaaaactgcttgctgtgt
ggctacctgcaagtgcaagagaaggggaagagttggaccaagatgtgggtggctgtaact
aaagcagaaccactggtgctgtacctgcaaagcagtgcacaggaccccaaagggtcacgg
ggagtgcctctccaagggttggaggtgagcctggtgccatcaggaacagccgacaagcca
gacatcaagcacatgttccggctcagccacgcacagcaaaccttccttctaagtgcccaa
gatgcagaacttcagaccaagtgggtggacatcctctccaaagctgcccgtggagacccc
cccacggaggcacagagcagcctgactgaacacaggaagagccagtag
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