KEGG   Oryzias melastigma (Indian medaka): 112159454
Entry
112159454         CDS       T07439                                 
Name
(RefSeq) contactin-4
  KO
K06761  contactin 3/4/5/6
Organism
oml  Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:oml00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:oml04515]
    112159454
   00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:oml00537]
    112159454
Cell adhesion molecules [BR:oml04515]
 Immunoglobulin superfamily
  Contactins
   112159454
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:oml00537]
 Others
  112159454
SSDB
Motif
Pfam: Ig_3 I-set Ig_2 ig fn3 V-set Ig_DSCAM-DSCAML_C Sp38 Pur_ac_phosph_N Ig_6 Tissue_fac C2-set_2 NDNF
Other DBs
NCBI-GeneID: 112159454
NCBI-ProteinID: XP_024149281
Ensembl: ENSOMEG00000003578
UniProt: A0A3B3BC64
LinkDB
Position
LG7:complement(5239800..5326188)
AA seq 1026 aa
MELLWKLVVLLSLVLHLTGSGVATKLIFTKQPGSVVFPIQPGESRKEVVFSCEAEGQPAL
VYRWKLNDSFLHPSPASRFSLVSGNLHIRHLNKEEDTGVYQCLASDSFGTIVSREANLHV
AYLENFKTQRRSPVRVREGQGVVLLCGPPPHSGELTFTWIFNEDSSSIVQDTRLFVSQKT
GNLYIAKVEPSDVGNYTCVVTNTVTKSSVRGPPTPLVLRADGVMGEYEPKIEVQFPEVIH
VANSSTVKLECFALGNPVPTISWRRVDDAPFGRKVKVNEAFGVLEIPYFQQENAGIYECL
AENSRGRNSVRGKLTFYASPQLTVKPQDVQKTIDEALVWECKASGKPKPSYRWLKNGESL
DPMEDRIQVNDGVLTIKSLNQADVGMYQCVAENKYGRIFCNAQLRVLAIAPDFSQSLVKA
QTLARQGGDVLIECKPRMSPRGVISWRKGEEAIRENHRVTVLDNGSLRLSNVTKADAGLY
TCVARNQFGVASSAGSLSVKDATVITSPAGHLDVTLGESIVLPCQVSHDPTLDLKFTWFF
NEQLIHFGGRGAYFEKAGGRSDGGIMIRNIQLKHAGKYTCAVQTKVDSISIATDVVVRGP
PGPPVDCQVVDMTETTATLSWRPGTDNHSPVRSYTIQARTPFSLGWQAVTTVPELPKGKK
LSASVFELSPWVEYEFRVLATNSIGTGEPSKPSKKARTKETAPRVTPGRVNGGGGGRSEL
VITWEPVPEELQSGPGFGYVVAFRPLGAPGWMQAAVTSPDASKYVFKNESIPPFSPYQVK
VGVYNNKGEGPFSPVTIIYSAEEEPSRAPTRLRVRSISASEIDVSWKPLPWSNNRRRILG
YELWYWREKEKQDAATVIRTVGNKTSVVIRDLEGSRTYYISLRAYNSAGVGPQSSIVNVT
TKKPPPSQAPVKIRWNTSNSKVILRWDQVHALENESEVTGYKVLYSQDKHSRPSVVETKN
TTLELSLPVNEDYVIQIKPFSEGGEGISSHQITIPRSFAVMGAAQELLAFPLVIFAALIF
TATATL
NT seq 3081 nt   +upstreamnt  +downstreamnt
atggagttgctatggaaacttgtagtgctgctgtcattggtgctgcatctgacaggaagt
ggagtcgccacaaaactcatcttcaccaaacagccaggcagtgtggtgttccccattcaa
cctggggagagtcgcaaggaggttgtgttcagctgtgaggccgaaggacaaccggcactc
gtctacaggtggaagctgaacgactcgttcttacatcccagcccagcatcacgcttctcc
cttgtgagtggaaatttacacatccgccatctaaataaagaggaagatactggtgtgtat
cagtgcctggcatcagactcgtttggcaccattgtcagcagagaagccaatctccacgtt
gcatacttggagaatttcaagacccagagaagaagtccggtgagggtccgtgaaggtcaa
ggagtggttttgctttgtggcccgccccctcactctggagagctcaccttcacatggatc
ttcaacgaagactcctcatctatcgtccaggacacacggctgtttgtgtcccagaaaact
ggtaacctctacatcgcaaaagtggaaccctcggatgtgggcaactatacatgtgttgtc
accaacacagtcaccaagagcagtgttcgaggaccaccaacgcctttagttctgcgcgct
gatggtgtgatgggcgaatacgagccaaagattgaagtgcagtttcctgaagtcatccat
gttgctaacagctcaaccgtcaaactggagtgttttgcacttggaaacccagtaccaaca
atcagctggagaagagtggacgatgccccctttggcaggaaagtgaaagtaaacgaggcc
tttggagttttagagatcccttatttccaacaagagaatgcaggaatctatgaatgcctg
gctgaaaacagcagaggaagaaactctgtgcgaggaaaacttactttttatgcctcaccg
cagctgactgttaaaccccaagacgtccagaagaccatcgatgaagctctggtgtgggag
tgcaaagccagcggtaaacccaaaccctcctatcgctggctgaagaacggagagtctctg
gatcctatggaagacagaattcaggtaaatgacggagtcctgacgataaaaagtctaaat
caggccgatgtcggaatgtaccagtgcgtggcagagaacaagtatggccgaatcttctgc
aacgctcagctcagagtcctcgctattgctccagacttctcccagagcttggtaaaggcc
caaactttggcccgacagggtggtgacgttctaatcgaatgtaaacccaggatgtctcct
cgtggcgtgatctcatggaggaaaggggaggaagccattcgagagaaccacagagttacg
gtgttggataacgggagcctacgtttatcgaatgttactaaagcggatgctggactctac
acatgtgtggccagaaaccagtttggagtggcgagcagtgctggcagtctttcagtaaaa
gatgcaactgtgatcaccagcccagcaggtcacctggatgtgactctgggggagagcatt
gttctgccttgccaggtttcacacgacccaacgttggacctaaagttcacctggttcttc
aacgagcagctcatccattttggaggtcgcggggcatattttgaaaaagctggtgggagg
tcagatggtggcattatgatccggaacattcagctgaagcatgctgggaaatacacctgt
gctgttcagaccaaagtagacagcatctccatcgctactgatgtggttgttagaggtcct
cctgggccacctgtggactgccaagtggttgacatgacagagacaacagccactctgtct
tggagacccgggacagacaaccacagtccagtccgcagctataccatccaagccagaact
cccttttctcttggatggcaagctgtcaccaccgttcctgaactgccaaaggggaagaaa
ctgtctgcctctgtctttgagttgagtccatgggtggagtacgagttcagagttttagcg
actaacagcatcggaacaggagaacccagcaaaccgtccaaaaaggcccgcactaaggaa
acggctcccagggtgactccagggagggtgaatggtggcggtggaggacgttcggaactg
gtaatcacctgggagcctgtccccgaggagctgcagagcgggcccggctttggatatgtt
gtggctttccgccctctgggggcgccgggctggatgcaggcggcagtcacctccccagac
gcttccaaatatgttttcaagaacgagagcatccctcctttctctccgtaccaagtcaaa
gtgggggtttacaacaacaaaggggaggggcctttcagtccggtgaccatcatctactct
gcagaggaagagcccagcagagctcccaccaggctcagagtgaggagtatttctgcctct
gagatagacgtcagctggaaacctttaccatggagcaacaaccgcagacgcatcctcggc
tatgagctgtggtactggagagaaaaagagaagcaggatgcagccactgtgatcaggacg
gtggggaataaaacctcagtagtcatcagggatctggagggcagcaggacctactacata
tccctgagggcctataacagtgcaggagtgggtccacagagcagcatagtcaatgtcaca
accaagaaaccaccacctagtcaagccccagtcaagatcaggtggaacacttccaactcc
aaggtcatcctccgctgggaccaagtccacgccctggagaacgagtcagaagtgacagga
tataaggtgttgtacagccaagacaaacacagccgtcccagtgtggtcgagaccaagaac
accaccttggagttatcgctgcccgtcaacgaagactatgtgattcagattaaacctttc
agcgagggaggggagggcatcagcagtcaccagattaccatccctaggagcttcgccgtc
atgggagcagctcaggagctcttggcttttcctctcgtcatctttgcagccctaatcttc
acagccacagcaactctatga

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