Oryzias melastigma (Indian medaka): 112159454
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Entry
112159454 CDS
T07439
Name
(RefSeq) contactin-4
KO
K06761
contactin 3/4/5/6
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oml04515
]
112159454
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
oml00537
]
112159454
Cell adhesion molecules [BR:
oml04515
]
Immunoglobulin superfamily
Contactins
112159454
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
oml00537
]
Others
112159454
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
fn3
V-set
Ig_DSCAM-DSCAML_C
Sp38
Pur_ac_phosph_N
Ig_6
Tissue_fac
C2-set_2
NDNF
Motif
Other DBs
NCBI-GeneID:
112159454
NCBI-ProteinID:
XP_024149281
Ensembl:
ENSOMEG00000003578
UniProt:
A0A3B3BC64
LinkDB
All DBs
Position
LG7:complement(5239800..5326188)
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AA seq
1026 aa
AA seq
DB search
MELLWKLVVLLSLVLHLTGSGVATKLIFTKQPGSVVFPIQPGESRKEVVFSCEAEGQPAL
VYRWKLNDSFLHPSPASRFSLVSGNLHIRHLNKEEDTGVYQCLASDSFGTIVSREANLHV
AYLENFKTQRRSPVRVREGQGVVLLCGPPPHSGELTFTWIFNEDSSSIVQDTRLFVSQKT
GNLYIAKVEPSDVGNYTCVVTNTVTKSSVRGPPTPLVLRADGVMGEYEPKIEVQFPEVIH
VANSSTVKLECFALGNPVPTISWRRVDDAPFGRKVKVNEAFGVLEIPYFQQENAGIYECL
AENSRGRNSVRGKLTFYASPQLTVKPQDVQKTIDEALVWECKASGKPKPSYRWLKNGESL
DPMEDRIQVNDGVLTIKSLNQADVGMYQCVAENKYGRIFCNAQLRVLAIAPDFSQSLVKA
QTLARQGGDVLIECKPRMSPRGVISWRKGEEAIRENHRVTVLDNGSLRLSNVTKADAGLY
TCVARNQFGVASSAGSLSVKDATVITSPAGHLDVTLGESIVLPCQVSHDPTLDLKFTWFF
NEQLIHFGGRGAYFEKAGGRSDGGIMIRNIQLKHAGKYTCAVQTKVDSISIATDVVVRGP
PGPPVDCQVVDMTETTATLSWRPGTDNHSPVRSYTIQARTPFSLGWQAVTTVPELPKGKK
LSASVFELSPWVEYEFRVLATNSIGTGEPSKPSKKARTKETAPRVTPGRVNGGGGGRSEL
VITWEPVPEELQSGPGFGYVVAFRPLGAPGWMQAAVTSPDASKYVFKNESIPPFSPYQVK
VGVYNNKGEGPFSPVTIIYSAEEEPSRAPTRLRVRSISASEIDVSWKPLPWSNNRRRILG
YELWYWREKEKQDAATVIRTVGNKTSVVIRDLEGSRTYYISLRAYNSAGVGPQSSIVNVT
TKKPPPSQAPVKIRWNTSNSKVILRWDQVHALENESEVTGYKVLYSQDKHSRPSVVETKN
TTLELSLPVNEDYVIQIKPFSEGGEGISSHQITIPRSFAVMGAAQELLAFPLVIFAALIF
TATATL
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atggagttgctatggaaacttgtagtgctgctgtcattggtgctgcatctgacaggaagt
ggagtcgccacaaaactcatcttcaccaaacagccaggcagtgtggtgttccccattcaa
cctggggagagtcgcaaggaggttgtgttcagctgtgaggccgaaggacaaccggcactc
gtctacaggtggaagctgaacgactcgttcttacatcccagcccagcatcacgcttctcc
cttgtgagtggaaatttacacatccgccatctaaataaagaggaagatactggtgtgtat
cagtgcctggcatcagactcgtttggcaccattgtcagcagagaagccaatctccacgtt
gcatacttggagaatttcaagacccagagaagaagtccggtgagggtccgtgaaggtcaa
ggagtggttttgctttgtggcccgccccctcactctggagagctcaccttcacatggatc
ttcaacgaagactcctcatctatcgtccaggacacacggctgtttgtgtcccagaaaact
ggtaacctctacatcgcaaaagtggaaccctcggatgtgggcaactatacatgtgttgtc
accaacacagtcaccaagagcagtgttcgaggaccaccaacgcctttagttctgcgcgct
gatggtgtgatgggcgaatacgagccaaagattgaagtgcagtttcctgaagtcatccat
gttgctaacagctcaaccgtcaaactggagtgttttgcacttggaaacccagtaccaaca
atcagctggagaagagtggacgatgccccctttggcaggaaagtgaaagtaaacgaggcc
tttggagttttagagatcccttatttccaacaagagaatgcaggaatctatgaatgcctg
gctgaaaacagcagaggaagaaactctgtgcgaggaaaacttactttttatgcctcaccg
cagctgactgttaaaccccaagacgtccagaagaccatcgatgaagctctggtgtgggag
tgcaaagccagcggtaaacccaaaccctcctatcgctggctgaagaacggagagtctctg
gatcctatggaagacagaattcaggtaaatgacggagtcctgacgataaaaagtctaaat
caggccgatgtcggaatgtaccagtgcgtggcagagaacaagtatggccgaatcttctgc
aacgctcagctcagagtcctcgctattgctccagacttctcccagagcttggtaaaggcc
caaactttggcccgacagggtggtgacgttctaatcgaatgtaaacccaggatgtctcct
cgtggcgtgatctcatggaggaaaggggaggaagccattcgagagaaccacagagttacg
gtgttggataacgggagcctacgtttatcgaatgttactaaagcggatgctggactctac
acatgtgtggccagaaaccagtttggagtggcgagcagtgctggcagtctttcagtaaaa
gatgcaactgtgatcaccagcccagcaggtcacctggatgtgactctgggggagagcatt
gttctgccttgccaggtttcacacgacccaacgttggacctaaagttcacctggttcttc
aacgagcagctcatccattttggaggtcgcggggcatattttgaaaaagctggtgggagg
tcagatggtggcattatgatccggaacattcagctgaagcatgctgggaaatacacctgt
gctgttcagaccaaagtagacagcatctccatcgctactgatgtggttgttagaggtcct
cctgggccacctgtggactgccaagtggttgacatgacagagacaacagccactctgtct
tggagacccgggacagacaaccacagtccagtccgcagctataccatccaagccagaact
cccttttctcttggatggcaagctgtcaccaccgttcctgaactgccaaaggggaagaaa
ctgtctgcctctgtctttgagttgagtccatgggtggagtacgagttcagagttttagcg
actaacagcatcggaacaggagaacccagcaaaccgtccaaaaaggcccgcactaaggaa
acggctcccagggtgactccagggagggtgaatggtggcggtggaggacgttcggaactg
gtaatcacctgggagcctgtccccgaggagctgcagagcgggcccggctttggatatgtt
gtggctttccgccctctgggggcgccgggctggatgcaggcggcagtcacctccccagac
gcttccaaatatgttttcaagaacgagagcatccctcctttctctccgtaccaagtcaaa
gtgggggtttacaacaacaaaggggaggggcctttcagtccggtgaccatcatctactct
gcagaggaagagcccagcagagctcccaccaggctcagagtgaggagtatttctgcctct
gagatagacgtcagctggaaacctttaccatggagcaacaaccgcagacgcatcctcggc
tatgagctgtggtactggagagaaaaagagaagcaggatgcagccactgtgatcaggacg
gtggggaataaaacctcagtagtcatcagggatctggagggcagcaggacctactacata
tccctgagggcctataacagtgcaggagtgggtccacagagcagcatagtcaatgtcaca
accaagaaaccaccacctagtcaagccccagtcaagatcaggtggaacacttccaactcc
aaggtcatcctccgctgggaccaagtccacgccctggagaacgagtcagaagtgacagga
tataaggtgttgtacagccaagacaaacacagccgtcccagtgtggtcgagaccaagaac
accaccttggagttatcgctgcccgtcaacgaagactatgtgattcagattaaacctttc
agcgagggaggggagggcatcagcagtcaccagattaccatccctaggagcttcgccgtc
atgggagcagctcaggagctcttggcttttcctctcgtcatctttgcagccctaatcttc
acagccacagcaactctatga
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integrated database retrieval system