Oryzias melastigma (Indian medaka): 112159526
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Entry
112159526 CDS
T07439
Symbol
ogg1
Name
(RefSeq) N-glycosylase/DNA lyase
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
112159526 (ogg1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oml03400
]
112159526 (ogg1)
Enzymes [BR:
oml01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
112159526 (ogg1)
DNA repair and recombination proteins [BR:
oml03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
112159526 (ogg1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OGG_N
HhH-GPD
HHH
RecR_HhH
Motif
Other DBs
NCBI-GeneID:
112159526
NCBI-ProteinID:
XP_024149423
Ensembl:
ENSOMEG00000009550
UniProt:
A0A3B3BTL6
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All DBs
Position
LG7:12956594..12961015
Genome browser
AA seq
395 aa
AA seq
DB search
MATHVVLTSGAKMWRSLPCPTSELRLDLTLACGQSFRWRETAERHWTGVMGGRVWTLTQT
DDLLWYHVYTNQKKQGGGDHKRTTASVQEENRAEEIYEAPAVTDEKQSTMEAEMLRDYFQ
LHVKMEDLYKQWGAADSHFKKTADVFTGVRMLRQDPTECLFSFICTSNNHISRIQGMVER
LCQALGAPLCQLDQTSYHDFPTLTALADCSVEARLRDLGFGYRARYLQQSAKKILDTHGS
QWLEGLRRVSYLEAREALRTLPGVGTKVADCVCLMSLDKPEAVPVDTHVWQIAKRDYKYA
ADNRQKSLTDKLHRDIGDFFRKLWGPYAGWGQSVLFCADLKKFQGLKEMKRPKEENETDE
RCKKTKKKNFDGNKIKTESDYQKKAKISVKKESVS
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atggccactcacgtggtgttaacatcaggggccaaaatgtggagatctttgccttgcccc
acttcagagctacgactggatctcactcttgcctgtggacaatcttttcgatggagggaa
accgcagagagacactggactggcgtgatgggaggccgggtgtggactctgactcaaacc
gatgacctactgtggtatcacgtctacacaaaccaaaagaagcagggaggaggtgaccac
aaaaggaccactgcttcagtccaggaagaaaacagagcagaggagatatatgaggcacca
gctgtcacggatgagaagcaaagcaccatggaggcagagatgctgagagactacttccag
ctgcatgtgaagatggaggatctatacaagcaatggggagcagcagactctcacttcaag
aaaactgctgatgttttcactggtgtccgaatgctgcgccaggaccccaccgagtgcctg
ttctcctttatctgcacctccaacaaccacatctctcgcattcagggcatggtggagaga
ctgtgccaggctctcggggctccactctgccagcttgatcaaacctcctaccacgatttt
ccaacactgacagctcttgcagactgcagtgtagaggcacgtctcagggatcttggtttt
ggatacagggcacgatacctccagcagagtgctaaaaagattttggacacccacgggtcc
cagtggctagaaggtttacggagagtttcctatctggaagctcgggaggctctccggaca
ctccctggggttggcacaaaggtggcagattgtgtgtgtttgatgtcgctggataagccg
gaagctgtgcccgttgacacacatgtgtggcagattgccaagcgggattacaagtacgct
gctgataatagacagaagagcttgacagataaacttcacagagatatcggagatttcttt
agaaagctgtgggggccatatgctggttggggccagtcggtattgttctgcgcagatctg
aagaagttccaaggccttaaagaaatgaagcgaccaaaggaagaaaatgagacggatgaa
aggtgtaaaaaaacaaaaaagaagaattttgatggaaataaaataaaaactgagtcagat
tatcagaaaaaggcaaagatttctgtaaaaaaagaaagcgtttcatag
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