Oryzias melastigma (Indian medaka): 112159530
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Entry
112159530 CDS
T07439
Symbol
apex2
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase 2
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oml03400
]
112159530 (apex2)
Enzymes [BR:
oml01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
112159530 (apex2)
DNA repair and recombination proteins [BR:
oml03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
112159530 (apex2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
zf-GRF
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
112159530
NCBI-ProteinID:
XP_024149429
Ensembl:
ENSOMEG00000003655
LinkDB
All DBs
Position
LG7:16995670..16999225
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AA seq
551 aa
AA seq
DB search
MKIVTWNINGIRTFKGGIKRALDLLDADIICVQETKVTRDLLDERTAIVEGYNSYFSYSR
GRSGYSGVATYCRDSATPLAAEEGLTGLLTNHEDAVGCYGDQTEFSSEELQLLDNEGRAM
ITKHRIMCQDKEEKTLTVINVYCPRADPEKPERKQFKLQFYKLLQCRAEAVLKDGSHVIV
LGDVNTSHRQIDHCDPCETNDFDENPGRKWLNDFLHNSSPEDPDDEEPKELSELKNPTNP
GRFVDTFRLFHPTRANAFTCWSTLTGARQTNYGTRIDYIFADCKLAEEQFVATDIMPEVE
GSDHCPVWGKLSCSLLASSKPPLLCTRYLPEFVGKQQKLSRFLIKMDQKSSQPEQKSVLP
ASQDDDERRENVNPSGANKVSDKKRSLASDSVLPKGKKTKTVNSSLKPQGNLLSFFKPKV
TNVNHQEKETKLTSPQGDQKVETSRDSSSTAAAETEHASNASLDTDKRKKTACQPTAALS
KVASSGFWKSILHGPPTAPSCKVHGEPCVLRTVKKEGPNMGKQFFVCARPQGHASNPEAR
CNFFEWVKKEK
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgaagattgttacttggaacataaatggcattaggacttttaaaggaggtatcaaacgt
gccctcgatttgctggatgcggatattatatgtgttcaggaaaccaaagtcaccagagac
ctgctcgatgaaaggactgctatcgttgagggttacaactcctatttcagctacagtcga
ggacgcagcggctactcgggagttgcaacttactgcagggacagtgctactccgctggca
gcagaggagggtctcacgggcctgctgaccaaccatgaagatgctgtgggttgctatgga
gaccaaactgagttttcaagcgaggagctgcagcttttggacaatgaaggacgagccatg
atcacaaaacacagaattatgtgtcaggacaaagaggagaaaacactcactgtaattaat
gtatactgtccacgggcggaccctgaaaagccagagcgaaaacagttcaagctgcagttc
tataagctgctgcagtgtcgggctgaggccgtactgaaagatgggagccatgtaatcgtt
ttgggtgatgtgaacacatctcatcgacagatcgaccactgtgacccttgtgaaactaat
gactttgatgaaaaccctgggaggaaatggttgaatgactttttgcacaacagcagtcca
gaagaccccgacgatgaagaacccaaagaactatcagaactgaagaatcccaccaaccct
ggaagatttgtggacaccttccgccttttccatccaacccgtgctaacgccttcacctgc
tggtccactctcacgggagcacgccaaaccaactatggcacgcgcattgactacatattt
gcagactgcaagctggcagaagaacagtttgtggccaccgacatcatgccagaggtggag
gggtccgaccactgtcctgtgtggggaaaactgagctgctctctacttgcgagctccaag
cctcctctgctctgcactcgctatctgccagagtttgtcggaaagcagcaaaaattatcc
cgttttcttatcaagatggaccaaaaatccagtcagcctgagcagaagagcgttttacct
gcatctcaagacgatgacgagaggagagagaatgtgaatccatctggagccaataaagtt
tcagacaaaaagcgttcgttagcatccgactctgtccttccaaaggggaaaaagactaag
acggtcaattcgtctttaaagcctcaagggaacctgctttccttctttaaaccaaaagtc
accaatgttaaccatcaggaaaaagaaactaaacttacttcaccacaaggcgaccagaaa
gtagaaacatccagagactcatcgtcaactgctgctgcagaaaccgaacatgcatccaat
gcttcgttggacacagacaaacggaagaaaaccgcctgtcagcccactgctgcactgtca
aaagtggcgtcatccgggttctggaagtcaatcctgcacggcccgcccacagcccccagc
tgtaaggtccacggggagccgtgtgtgctccgaacggtgaagaaggaggggccaaacatg
ggcaaacagttcttcgtgtgtgcacgtcctcagggacacgcctccaaccccgaggcgcgc
tgtaatttctttgagtgggttaaaaaggaaaagtga
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