KEGG   Oryzias melastigma (Indian medaka): 112159559
Entry
112159559         CDS       T07439                                 
Symbol
col8a2
Name
(RefSeq) collagen alpha-2(VIII) chain
  KO
K23455  collagen type VIII alpha
Organism
oml  Oryzias melastigma (Indian medaka)
SSDB
Motif
Pfam: Collagen C1q BclA_C
Other DBs
NCBI-GeneID: 112159559
NCBI-ProteinID: XP_024149479
Ensembl: ENSOMEG00000019173
LinkDB
Position
LG11:complement(7382187..7441623)
AA seq 688 aa
MLVTMMLASFCFLLTLGGHALAGGYPPMPHMKYMQPMMKGPIGPPFREGKGHYVDMPPMM
EVKGEPGPQGKPGPRGPPGPPGLPGKPGLGKQGLNGQPGPQGPPGLTGIGKPGLPGLPGK
IGPRGIPGLNGEVGPHGEPGPRGLPGQPGLPGPVGLSLNGKPGLPGIRGPPGARGEPGIS
GVPGPPGERGLKGENGNGKPGLPGIIGPPGLKGIRGPPGPPGLGKPGPKGVPGFPGPKGD
NGLPGDQGKPGEPGAPGLQGLPGPVGLGKPGLDGLPGVPGHLGAKGEPGPRGSPGAPGTP
GYGKPGVSGPKGEKGHGGFPGIKGDRGDQGMVGPTGGPGIDGLPGPPGLQGPTGLPGKHG
LPGQKGELGPQGPPGLPGFRGDQGSMGPPGKPGTPGEKGFPGPNGSIGKPGPKGEAGNVG
LPGNPGMTGPQGPKGEPGFIGTPGPRGQSGIPGLQGPMGPMGPQGVPGLRGEPGLPGPPG
LGKLGEKGAIGPQGPPGKPGPTGLNGNPGPPGPPGPPGPPGNGQTVVSGPANTELGGEEI
PGDRKGPVYMQVPLSATVAPAFTAILTTPFPPSSMPIKFDRILYNGQNAYSPSTGIFTAP
LSGVYYFAYHMHVKGTNLWVALYKNNVPATYTYDEYKKGYMDQASGSAVLELKEGDQVWV
QMPSDQANGLYSTEYIHSSFSGFLLCPT
NT seq 2067 nt   +upstreamnt  +downstreamnt
atgctggtgaccatgatgctggcttcattctgctttctactgacacttgggggacatgct
cttgctggaggctacccccccatgcctcacatgaagtacatgcaacctatgatgaaagga
cccattggacctccgtttcgagagggcaaggggcattatgttgatatgccaccgatgatg
gaagttaaaggggagccaggcccacagggtaaacctggaccaagaggaccccctggtcca
cctggactacccggaaaacctggacttgggaagcaaggactcaacggtcaaccaggtcct
caagggcctcccggcttaacaggaattggtaagcctggacttccaggtctgccaggaaag
attggaccaagagggattccaggactcaatggtgaagttggacctcatggtgaaccaggt
cctcgtggacttcctgggcagcctggccttcctggtccagttggtctgtccctaaatggg
aaacctggacttccaggtataagaggcccccctggtgctcgtggtgagccaggaatcagt
ggtgttccaggcccgccaggtgagcgtggacttaagggtgagaatggaaatggaaagcca
gggctccctggtatcattggccctcccggactgaaaggaatccgaggaccacctggtccc
ccaggtctcggcaaaccaggaccaaaaggtgtacctggattccctggtcctaaaggtgat
aatggacttccaggagatcaaggaaagccgggagagcccggggcaccaggtcttcaaggt
cttcctggtccagttgggttggggaagcctggtctagatggacttccaggagtaccaggc
catcttggtgcaaaaggggaaccagggcctcggggcagcccaggagctcctgggacccct
ggatatggaaaacctggagtgtcagggccaaaaggtgaaaagggtcatggtggatttcct
ggtatcaaaggggacagaggagaccaaggaatggtaggcccaactgggggcccaggtatt
gatggattaccaggaccaccaggacttcaaggtccaacagggctaccaggaaaacatgga
cttccagggcaaaagggagaactaggtccccaaggtcctccaggactccctgggtttaga
ggtgatcaaggctcaatgggacccccaggaaagccagggactcctggggaaaaaggcttt
cctgggccaaatggttccattggaaaaccaggacccaaaggtgaggcagggaatgttggc
ctacctggaaatccaggaatgacaggtcctcaaggaccaaaaggagagcctggatttata
gggactcctggtccaaggggccagtctggtattcctggtcttcaaggtcctatgggtcca
atgggtcctcagggtgtaccaggtttgaggggtgaacctggacttccaggacctccagga
ctgggcaagttgggagagaagggtgcaataggtcctcagggtcccccagggaaaccaggc
cctactggacttaacggtaaccctggcccgcctggtcctccaggaccccctggtcccccg
gggaatggccaaacagttgtctcagggcctgcgaatacagagttgggtggggaggaaata
ccaggagacagaaaagggcctgtatacatgcaagttccgctttctgcaactgtggcgcca
gccttcactgccattctcaccacacctttccctccttctagtatgccaatcaagtttgat
aggatcctatacaatggccaaaatgcctacagtccctccactggcatctttactgccccc
ttatctggtgtctactactttgcgtaccatatgcatgtaaagggaactaacttgtgggtc
gctttgtacaagaacaatgtaccagccacctatacctatgacgaatacaagaaaggctac
atggaccaagcatctggtagtgctgtgttagagctgaaggagggtgaccaggtatgggtt
cagatgccctcagatcaggcaaatggcctctactctacagaatacatccactcctccttc
tcaggatttttactgtgccctacataa

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