Oryzias melastigma (Indian medaka): 112159569
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Entry
112159569 CDS
T07439
Name
(RefSeq) neural cell adhesion molecule L1-like protein isoform X1
KO
K06758
L1 cell adhesion molecule like protein
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oml04515
]
112159569
Cell adhesion molecules [BR:
oml04515
]
Immunoglobulin superfamily
L1 family
112159569
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
fn3
ig
V-set
Ig_5
Pur_ac_phosph_N
FN3_DSCAM-DSCAML_C
C2-set_2
Ig_4
Ig_6
Bravo_FIGEY
C2-set_3
Ig_Rha78A_N
Ig_PDGFR_d4
Syndecan
CD34_antigen
Protocadherin
fn3_SORL1
Motif
Other DBs
NCBI-GeneID:
112159569
NCBI-ProteinID:
XP_024149496
Ensembl:
ENSOMEG00000003534
LinkDB
All DBs
Position
LG7:complement(5392700..5459890)
Genome browser
AA seq
1296 aa
AA seq
DB search
MLVLHAFKKLNCACFWASARGENSQWFKSLSFVPYNVRVAANHHPWTQVPPNQRRGMRMV
ESLTLVLLWTLSYQAAGLNIPLEVKQPPTITSHSETPIIVLPLDNSVTITCEARGNPPPI
YRWTKDGEDVTLSNITSITSGPTSGALKFHGMALRQVQGKYRCFASNQLGTAMTNDIEII
VSGSPKFPKETIPPVVVNEGDPVILECNPPEAVVPRQLYWMTLGLEHIKQDKRVSMGTDG
NLYFSNALENDSRQDYCCSAAFPRIRTMVQQSPMVLEVKSMKPANGSSAAKSPPARAPSM
LLPSGVQTEKVLMKGEELQLECITAGFPTPDVTWMKMGEELSDRTKLRNFDKLLTISAVE
ETDQGKYMCTASNSAGKTVHYFRVIVEEPPIWLGDPPQGQITTIGSDVHIKCSVGGTPLP
DITWKRNGELFKDDSENYKRVLDDTVVLHNAMEEDSGVYQCEASNRHGRILANINILVMS
KPPLILTKDVQEYAVILGNNILINCSVFSSPPASISWMKEEAVLTGERFSAFDNNQSLKI
MKAETSDSGKYECVAKNTEGSSSITALLDVKEPTKIVSPPQNKQIISGTSAKLVCEVTYD
KSLQDSFELEWRKDGEKISPSEENSFRYIRGDHKLQIMNVNLRDQGLYTCIARTRLDEVN
ATALIIVLDVPDAPERLKIIEIKDSRNIVISWTPGSDHNSSITEFVVEYEENQWEPGRWK
ELKRVPGNQATAELALFGNLRYQFRVYAVNAIGPGTPSEPSERHSTDPTVPDRNPENIQI
HGNIPYQMEISWSPLLLTESNGPGIEYKVSYRRLEVEDAWTEQLVQRPLYVVKGTPAFTP
YEIKVHARNSFGWGPEPKVVTGYSGEDTPSTAPQDVAVEVINTTAVRVSWTQVPAATVRG
HLQGYEVQWVRTRNFLDREKTLNEKRSESFPGNRSHAIVAGLKPYSEYKLTVRVVNKKGK
GPMSDPVTFTTPEGAPGLLPTLTASDCRADSMLLVWGPPLETNGILFGYHLQYHLLNEST
KEVIDSQEMNITGADITQWRLTGLNSGSRYRIHLRACTKASCGPPQSKEGETLPTLIPAL
LNISSYVSDTFAKISWTATEEQRELQLYVAYMNNRDGKWHFSEAINVSQSFHIIDGLKPG
TKYTVRLMAKKLLDNASFFEDVIQTQIKGKIEDPKDASTTGWIIGTMCALALLVIVALIF
FCLMKKKGGKYAVKEKEDLHCDTESQGMMDECSEKKQQKDCTFFPLDDNSVLNYTEEDDD
DAFNEDGSFIGEYSDPNRRKGSYESLDIPRFKHTAI
NT seq
3891 nt
NT seq
+upstream
nt +downstream
nt
atgttggttcttcatgcttttaagaagttaaactgcgcctgcttttgggcctctgcaaga
ggagaaaactctcaatggttcaaatcgctgtcctttgtgccttacaacgtccgtgtagca
gctaatcatcacccctggactcaagtgccacctaatcagcggagggggatgaggatggtt
gagagcctgacgttagttctgctttggaccttgagttaccaagcggctggccttaatatt
cctttggaagtgaagcagccgccgaccataacatctcattcagaaactcctattattgtg
cttccccttgacaactccgttaccatcacatgtgaagccagaggaaatccaccccccata
tacagatggacaaaagatggagaggacgtgacattatcaaacatcacatcaataacatca
ggcccaacgagtggagctttaaagtttcacggcatggcccttcgccaggttcagggcaaa
tacagatgctttgcttcaaaccagctgggtacagccatgaccaatgacattgagatcata
gtgtctggcagtcccaagtttccgaaggaaacaattcctccagttgttgtcaatgaggga
gatccggtcatcctggagtgtaatcctcctgaagctgttgtccctcgccagctctactgg
atgactcttggtctggagcatatcaagcaggataagagggtttccatgggaacagatggc
aacctgtacttttctaatgccttagaaaacgacagtcggcaggattattgctgctcagcc
gccttccccaggattcgcaccatggtccagcaaagtcccatggttctggaagtcaaaagc
atgaaacctgctaatggctcctctgccgcaaagtcccccccagcaagagcacccagcatg
ctgctgccctctggtgttcagacggagaaggtgctgatgaagggggaggaactgcagctc
gagtgcataacagcaggcttccccacgcctgacgtgacctggatgaaaatgggtgaagag
ctgtcagatcggacaaaactgagaaactttgacaagctgttgaccatatctgctgttgaa
gagacggatcagggcaaatacatgtgcaccgcttctaattccgctggaaagactgtgcac
tactttcgtgtgatagtggaagagccaccgatatggttgggtgatcctcctcagggccag
attactaccatcgggtctgatgttcatattaagtgctcagttggaggaacacctctacca
gatataacgtggaaaaggaacggagaattatttaaagatgactctgagaattacaagcga
gttctcgatgacactgtggtgcttcacaacgccatggaggaggacagtggtgtctaccag
tgtgaagcctccaaccgtcacggaaggattctggccaacataaacatcctggtcatgagt
aagcctcctctgatactgacgaaggacgtccaggagtatgcagtgatcctgggaaataac
atcctcataaactgcagtgttttcagctctcctccagccagcatttcttggatgaaagag
gaggcagtcctcactggggaacggttttctgcctttgataacaaccagtcgctgaaaatc
atgaaagctgaaacaagtgacagtgggaagtatgagtgtgtggccaaaaacacagaggga
tcatcgagtattactgcacttctggatgtcaaagagcccacaaaaatagtgagtccacct
cagaacaagcagatcatcagtgggacttcagctaaactagtgtgcgaggtgacatatgat
aaaagtctgcaggacagctttgagttggagtggaggaaagatggagaaaagatctcaccg
tctgaagagaacagcttcaggtacatcagaggtgatcacaaattgcagatcatgaacgtg
aacctgagagaccagggactgtacacatgcattgccagaacacgcttggatgaggtcaat
gccactgccctaataatcgtgttagatgttcctgatgcgccagagaggttaaagataatt
gaaatcaaggattcgaggaatattgttatctcctggacgcctggaagtgatcacaacagc
tccatcacagaattcgtagtggagtatgaggagaaccaatgggagccagggaggtggaag
gagctaaagagggttcctggtaaccaggcaacagcggagctggctctgtttggaaacctc
aggtatcagtttagagtttatgctgttaatgccatcgggcctggaacccccagtgagcca
tctgagagacacagcacagaccctactgtacctgacaggaatccagaaaacattcaaatt
catggaaatatcccctaccaaatggaaattagctggagtccactattactgactgagtcc
aatggaccaggcattgaatacaaggtgagctaccgcagactggaagtggaagatgcatgg
acagagcagctagtccaaagacccctctatgttgtgaaaggcacgcccgcctttaccccc
tacgagatcaaagttcatgccaggaacagctttgggtggggccccgagcctaaggtggtc
acaggttactctggagaagatacgccatccactgcaccacaggacgtagcagttgaggtg
atcaacactactgctgtccgagttagctggacccaggttccagctgctacagttcgaggt
catctccagggttatgaagttcagtgggtgagaacgagaaatttcctggatcgagagaag
actttaaatgaaaagcggtcggagtcttttcctggaaacaggagtcacgccattgtggca
gggctcaaaccctactcagagtacaaactcactgtcagggttgtcaacaagaaggggaaa
ggccccatgagtgatcctgtcaccttcactactccagaaggagcaccaggattgctgccc
accttaaccgcctcagactgcagggcagattctatgctgctggtatggggaccacctctg
gagacaaacggcatcctcttcggctatcacctccagtaccacctcttaaatgagagtacg
aaggaggtgattgattcccaagagatgaacatcaccggagctgacatcacccagtggcga
cttacaggattaaactcgggcagccgctaccgcattcacctcagagcctgcactaaagcg
agttgtggacctccacagtcaaaggagggcgagactttacctacactgattccagccctg
ttgaacataagctcttatgtgagtgacacctttgccaaaatcagctggactgccacagaa
gagcagagggagttgcagctttatgtggcttatatgaataaccgtgatggtaaatggcat
ttctcagaggctataaacgtttctcaaagtttccacatcattgatgggctcaaacctggg
acgaagtacactgtacgcctcatggccaagaaactacttgataatgctagctttttcgaa
gatgtaatccagacacaaatcaaaggtaagattgaagacccaaaggacgcttcaacgacg
ggctggattatagggaccatgtgtgctttggccctgcttgtcattgttgcactcatattt
ttttgtctaatgaagaaaaaaggtggcaaatatgcagtgaaagagaaggaggatctccac
tgtgacacggagtcacaaggaatgatggatgaatgcagtgaaaaaaagcagcagaaggat
tgcactttcttccccctggatgataacagcgttttaaactacacagaagaagacgacgac
gacgcattcaacgaggatggatcttttattggagaatactctgatccaaaccgccgcaaa
ggatcatatgaatccctcgacatccctagattcaaacacactgcaatataa
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