Oryzias melastigma (Indian medaka): 112159575
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Entry
112159575 CDS
T07439
Symbol
arhgef16
Name
(RefSeq) rho guanine nucleotide exchange factor 16
KO
K20688
Rho guanine nucleotide exchange factor 16
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oml04131
]
112159575 (arhgef16)
Membrane trafficking [BR:
oml04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
112159575 (arhgef16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SH3_9
PH
SOS1_NGEF_PH
SH3_2
SH3_1
RHG20_PH
ECT2_PH
Motif
Other DBs
NCBI-GeneID:
112159575
NCBI-ProteinID:
XP_024149508
Ensembl:
ENSOMEG00000004756
UniProt:
A0A3B3D2Z6
LinkDB
All DBs
Position
LG7:complement(3823070..3836529)
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AA seq
698 aa
AA seq
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MSQSESENCSQVPELLGSHLATELHIYEPGDECHQAGASPTPSCETPTPVQDPEDRIPES
HEVVLSTESPAAQKMGSHQLIPKTLASRPKNRHHTTVVTFPVKKSGGDSSESHSRHSAQV
PDVPWEDYDSDGDGFDMRRNRRNRSYRAAVTSLDIEAMSSGRAPVSTLKPVSEVRASSPD
PPRTLGRKFNTRNLGRKKNHRGSFKDATPCLYQEMRERGLHSTNQDELLDDFVVVETPVE
DQGIVVKNYKPAQLTWSQLPQVKNSDILSRITPQERKRQEAIFEIISSEHSYLHSLGILV
RHFKESKILSKTMGPTEHHHLFSNISVILKVSQRFFEDLERRHQEDVVIRDISDIIQNHA
AHHFEPYIAYCSNETFQQRTHQRLLNTNTAFKEALKQLESSSECGGLPMFSFLILPMQRV
TRLPLLLDTICQKTPENTAEYFAAVWALHAMSKLVDSCNDGARRMERTEHMYTIQKQMDF
GKIKPFPLVSASRWLKKHGELNISAEELSIWKAFINRSYYLFLFNDVLIVTKKKTEETFV
VLDYATLENVHVESAVETDVQTSSPTKSTPLTFKLLMSKNSDGRSEQISLVADSRVDRAR
WITALTEHKQADAFTCKEGLPQYEATKSYIPKEPDEIVLRQAELVLVMKKEEDWCYGERM
RDGERGWFPANCATEITNPTVMESNVQRMKRLRKETNV
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaaagtgagtcagaaaactgcagccaggtccctgaacttctggggagtcacctc
gccactgagcttcatatatacgagccaggggatgaatgccaccaagcaggagcttctccc
acgccgtcctgtgaaacccccacccctgtacaggatccggaggacaggatcccagagtct
catgaggtggttttaagcacagaaagtcctgcagcacagaagatgggctctcaccagctc
atccccaaaacattagccagccgtccaaaaaatcggcaccacaccaccgtggtgacattc
ccggtgaagaagtctggcggggattctagtgagagccacagccgtcactcagcccaggtg
ccggatgtgccgtgggaggattatgacagtgatggagacggctttgatatgaggaggaac
cgcaggaaccgctcgtacagagcagcggtgaccagcctggacattgaagccatgagctca
ggacgagcgcctgtcagcaccctgaagcctgtgagtgaggtcagagcaagcagtccggat
ccgcctcgcaccctcggacgcaagtttaatacacgaaaccttggaagaaagaagaaccat
cggggatcatttaaagatgcgacaccatgcctgtaccaggagatgcgtgagcgcggtctg
cactccaccaaccaggacgagctgctagacgactttgtggtggtggagactccagtggag
gatcagggcattgtggtgaagaactacaagccagcacagctcacctggagccagctgcca
caggtgaagaactcagacattctttcaaggataacacctcaggagagaaaaagacaagag
gctattttcgagatcatcagctcagagcactcgtacctgcacagcctgggcatcctggtg
cgtcacttcaaggagagtaaaatactgagtaaaacgatggggcccacagagcaccaccat
ctgttctccaacatatctgtaattctcaaagtcagccaaaggttttttgaagacctggaa
cgtcgtcaccaggaggacgtggtgatccgtgacatcagcgacattattcagaaccacgct
gcgcaccactttgagccttacatcgcgtattgctccaacgagaccttccaacagaggacg
catcagaggctgctgaatactaacactgcattcaaagaggctctgaagcagctggagagc
agcagtgaatgtggaggccttcctatgttctccttcctcatcctgcccatgcagagagtt
accaggctgcctctgctgctcgataccatctgtcagaaaaccccagaaaacacagcagag
tactttgcagccgtgtgggccctgcatgccatgagcaagttggtggatagctgcaatgac
ggagctagaagaatggagagaacggagcacatgtacaccatccagaagcagatggatttt
ggaaaaatcaaaccattcccactggtgtctgcatcacgatggctgaagaagcatggtgag
ctcaacatctctgcagaagagctcagtatatggaaagctttcatcaacagaagctactac
ttgttcctcttcaatgatgtcctaattgtcaccaagaagaagactgaggagacctttgtg
gtcctggattatgctacgctggaaaatgtgcacgtggaaagtgcagtggaaacagatgta
caaacgagctcacctaccaaaagcacgcccttgaccttcaaactgctgatgagcaagaac
agtgacgggaggtcggaacaaatctccttagtagctgattccagagtggatcgggcacgc
tggataaccgcccttacagagcacaaacaggctgatgccttcacatgcaaagaagggctt
ccacaatatgaggccaccaaatcctacatcccaaaggaaccagatgagattgtcctccgc
caggctgagcttgtccttgtcatgaaaaaggaggaagattggtgctatggggagagaatg
cgagatggagaaagaggctggtttcctgcaaattgtgccacagagatcaccaaccccact
gtcatggagagcaacgtacaacgaatgaagcgtttgcgcaaagagaccaatgtttga
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