Oryzias melastigma (Indian medaka): 112159576
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Entry
112159576 CDS
T07439
Symbol
ybx1
Name
(RefSeq) Y-box-binding protein 1 isoform X1
KO
K09276
Y-box-binding protein 1
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oml03000
]
112159576 (ybx1)
03019 Messenger RNA biogenesis [BR:
oml03019
]
112159576 (ybx1)
03041 Spliceosome [BR:
oml03041
]
112159576 (ybx1)
Transcription factors [BR:
oml03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Cold-shock domain factors, YB-1/DbpB-like
112159576 (ybx1)
Messenger RNA biogenesis [BR:
oml03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
112159576 (ybx1)
mRNA cycle factors
Common to processing body (P body) and stress granule
112159576 (ybx1)
Spliceosome [BR:
oml03041
]
Common components
Common spliceosomal components
General mRNP proteins
112159576 (ybx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CSD
OB_RNB
S1CSD-TOTE-2
Motif
Other DBs
NCBI-GeneID:
112159576
NCBI-ProteinID:
XP_024149509
Ensembl:
ENSOMEG00000004798
LinkDB
All DBs
Position
LG7:3818919..3823282
Genome browser
AA seq
326 aa
AA seq
DB search
MSSEAETQQQPPQPAADAESPSSPAAAASAGDKKVIATKVLGTVKWFNVRNGYGFINRND
TKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVAVQGSKYA
ADRNRYRRYPRRRGPPRGGDYPENYPSDGEGEPGSGGRDKGNRDGGESAPEGESQPQQRR
PTYPGRRRYPPYFVGRRYGRRPPYTNAPRGEMPEGVEGDENQGGPDQGNKPVRQNYYRGF
RPRFTPRGPPRPRPVRDGEEDKENQGGEGGQNQQPRQRRYRRNFNYRRRRQQTGGKPGQE
SKDAKAGGEPSAEKTSAPEAQQGGAE
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcgaggccgagacacaacaacaaccaccgcagcctgctgccgatgcggaaagc
ccatccagcccggcagctgcagcttccgcgggggataagaaggtcatcgcaacaaaagtc
ttgggtacagtcaaatggttcaacgtcaggaatggatatggtttcatcaataggaatgac
acaaaagaggatgtttttgtacaccagacagccataaaaaagaacaacccaaggaagtat
cttcgcagtgttggggatggagagactgtggagtttgatgtagttgagggagagaagggt
gcagaggcagcaaatgtcactggcccaggaggggttgctgtccagggaagtaagtacgcc
gctgacaggaaccgctacaggcgttatccacgcagaagggggccccctcgcggaggagac
tacccagagaactacccaagtgatggagagggcgagcctggcagtggagggcgtgacaaa
ggcaacagagacgggggagaaagcgcccctgagggagaatcgcagccacagcagcgcaga
cccacttaccccggcagacgacgctatccaccatactttgtaggtagacgttatggtcgt
cgacccccgtacaccaatgcaccacgcggagaaatgcctgagggagttgaaggtgacgaa
aaccagggaggtccagaccagggcaacaaaccagtgaggcagaactactacagaggcttc
agaccaaggttcacacccaggggtccaccccgtcccagaccggtgcgggacggtgaggag
gacaaggagaatcagggaggtgaaggtggtcagaatcaacagccccgtcagcggcgctac
cgccgtaacttcaactaccgccgcagacgccaacagactggtggtaaaccaggccaggaa
agcaaggatgccaaggcaggaggtgaaccatctgcagaaaaaacgtccgctcccgaggcc
cagcagggtggggctgagtag
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integrated database retrieval system
