Oryzias melastigma (Indian medaka): 112159622
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Entry
112159622 CDS
T07439
Symbol
tuba5
Name
(RefSeq) tubulin alpha 5
KO
K07374
tubulin alpha
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04145
Phagosome
oml04210
Apoptosis
oml04530
Tight junction
oml04540
Gap junction
oml04814
Motor proteins
oml05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
112159622 (tuba5)
09143 Cell growth and death
04210 Apoptosis
112159622 (tuba5)
09144 Cellular community - eukaryotes
04530 Tight junction
112159622 (tuba5)
04540 Gap junction
112159622 (tuba5)
09142 Cell motility
04814 Motor proteins
112159622 (tuba5)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
112159622 (tuba5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oml03019
]
112159622 (tuba5)
03036 Chromosome and associated proteins [BR:
oml03036
]
112159622 (tuba5)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oml04812
]
112159622 (tuba5)
04147 Exosome [BR:
oml04147
]
112159622 (tuba5)
Messenger RNA biogenesis [BR:
oml03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
112159622 (tuba5)
Chromosome and associated proteins [BR:
oml03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
112159622 (tuba5)
Cytoskeleton proteins [BR:
oml04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
112159622 (tuba5)
Exosome [BR:
oml04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
112159622 (tuba5)
Exosomal proteins of other body fluids (saliva and urine)
112159622 (tuba5)
Exosomal proteins of colorectal cancer cells
112159622 (tuba5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
112159622
NCBI-ProteinID:
XP_024149586
Ensembl:
ENSOMEG00000002724
UniProt:
A0A3B3B9H8
LinkDB
All DBs
Position
LG7:complement(17704719..17710173)
Genome browser
AA seq
450 aa
AA seq
DB search
MRECISIHVGQAGVQTGNACWELFCLEHGVGPDGVFLDDPAEPNSREDPFNTFFNTGSFG
RHVPRAIYVDLEPSVIDEVRVGKYRELFHPEQLISGKEDAANNYARGHYTVGKEIIDGVM
ERIRKMTDQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSLDYGKKAKLEFAVYPAPQVST
AVVEPYNAILTTHTTLEHSDCAFMVDNEAIYDICRRNMDIESPGYTNLNRLIGQIVSSIT
ASLRFDGALNVDLTEFQTNLVPFPRIHFPLVTYSPIISAEKAYHEQLTVSEITSSCFEPT
NQMVKCDPRQGKYMACCMLYRGDVLPKDVNAAIASIKTRRSIQFVDWCPTGFKVGINYQP
PTAVPGGDLAKVQRAVCMLSNTTAISEAWSRLDHKFDLMYAKRAFVHWYVGEGMEEGEFA
EAREDLACLEKDYEELGRMSSDSENDDEEV
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgagagagtgcatctccatccatgtgggccaggcgggggtccagacgggaaatgcatgc
tgggagctgttctgcttggagcacggcgtcggtccggatggagtcttcctggacgatccc
gccgagcccaactcgcgagaagatccgttcaacacgttcttcaacaccggcagctttggc
cgccacgttccgagagcgatctacgtcgacctggagccttcggtcatagatgaggtgagg
gttgggaagtacagggaactcttccaccctgaacagctgatctctggaaaggaagacgca
gccaacaactacgcccgaggtcattacaccgtcgggaaggagatcatcgacggagtcatg
gagcgaattcggaaaatgacggatcagtgcaccggtctgcagggattcctggtcttccac
agcttcggagggggcaccggttcaggtttcacctctctcctgatggagcgtctgtcgcta
gactacggcaagaaagcaaagctggagtttgccgtgtacccagctccccaggtgtccacg
gcggtggtggagccctacaacgccatcctgaccacccacaccaccctggagcactccgac
tgcgccttcatggtggacaacgaggccatctacgacatctgccggcgcaacatggacatc
gagagtccgggatacaccaacctcaacagactgattggtcagatcgtgtcctccatcacg
gcctcgctccgtttcgacggcgccctaaacgtcgacctgacggagttccagaccaacctg
gttccattccctcgcatccacttccctctggtgacttattcgcccatcatctctgcggag
aaggcgtaccacgagcagctgaccgtgtccgagatcaccagctcctgctttgaaccgacc
aatcagatggtcaaatgcgatcctcgtcaaggcaagtacatggcctgttgcatgctgtac
cgaggggacgtcctccccaaagacgtgaacgccgccatagcaagcatcaagacccgccgc
tccatccagtttgttgactggtgcccgactggattcaaggtgggcatcaattatcagcct
ccaactgcagtccctggaggcgacctggccaaagttcagcgtgctgtgtgcatgctgagc
aacaccaccgccatttctgaggcctggtcccgcctcgaccacaagtttgacctgatgtac
gccaagcgtgcgtttgttcattggtacgtgggcgagggcatggaggagggggagttcgcg
gaggccagagaggacctggcctgcctggagaaggattatgaggagttgggccggatgagt
tccgactctgaaaacgacgatgaagaagtctag
DBGET
integrated database retrieval system