KEGG   Oryzias melastigma (Indian medaka): 112159622
Entry
112159622         CDS       T07439                                 
Symbol
tuba5
Name
(RefSeq) tubulin alpha 5
  KO
K07374  tubulin alpha
Organism
oml  Oryzias melastigma (Indian medaka)
Pathway
oml04145  Phagosome
oml04210  Apoptosis
oml04530  Tight junction
oml04540  Gap junction
oml04814  Motor proteins
oml05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:oml00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    112159622 (tuba5)
  09143 Cell growth and death
   04210 Apoptosis
    112159622 (tuba5)
  09144 Cellular community - eukaryotes
   04530 Tight junction
    112159622 (tuba5)
   04540 Gap junction
    112159622 (tuba5)
  09142 Cell motility
   04814 Motor proteins
    112159622 (tuba5)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    112159622 (tuba5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:oml03019]
    112159622 (tuba5)
   03036 Chromosome and associated proteins [BR:oml03036]
    112159622 (tuba5)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:oml04812]
    112159622 (tuba5)
   04147 Exosome [BR:oml04147]
    112159622 (tuba5)
Messenger RNA biogenesis [BR:oml03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     112159622 (tuba5)
Chromosome and associated proteins [BR:oml03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     112159622 (tuba5)
Cytoskeleton proteins [BR:oml04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    112159622 (tuba5)
Exosome [BR:oml04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   112159622 (tuba5)
  Exosomal proteins of other body fluids (saliva and urine)
   112159622 (tuba5)
  Exosomal proteins of colorectal cancer cells
   112159622 (tuba5)
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3 DUF7281
Other DBs
NCBI-GeneID: 112159622
NCBI-ProteinID: XP_024149586
Ensembl: ENSOMEG00000002724
UniProt: A0A3B3B9H8
LinkDB
Position
LG7:complement(17704719..17710173)
AA seq 450 aa
MRECISIHVGQAGVQTGNACWELFCLEHGVGPDGVFLDDPAEPNSREDPFNTFFNTGSFG
RHVPRAIYVDLEPSVIDEVRVGKYRELFHPEQLISGKEDAANNYARGHYTVGKEIIDGVM
ERIRKMTDQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSLDYGKKAKLEFAVYPAPQVST
AVVEPYNAILTTHTTLEHSDCAFMVDNEAIYDICRRNMDIESPGYTNLNRLIGQIVSSIT
ASLRFDGALNVDLTEFQTNLVPFPRIHFPLVTYSPIISAEKAYHEQLTVSEITSSCFEPT
NQMVKCDPRQGKYMACCMLYRGDVLPKDVNAAIASIKTRRSIQFVDWCPTGFKVGINYQP
PTAVPGGDLAKVQRAVCMLSNTTAISEAWSRLDHKFDLMYAKRAFVHWYVGEGMEEGEFA
EAREDLACLEKDYEELGRMSSDSENDDEEV
NT seq 1353 nt   +upstreamnt  +downstreamnt
atgagagagtgcatctccatccatgtgggccaggcgggggtccagacgggaaatgcatgc
tgggagctgttctgcttggagcacggcgtcggtccggatggagtcttcctggacgatccc
gccgagcccaactcgcgagaagatccgttcaacacgttcttcaacaccggcagctttggc
cgccacgttccgagagcgatctacgtcgacctggagccttcggtcatagatgaggtgagg
gttgggaagtacagggaactcttccaccctgaacagctgatctctggaaaggaagacgca
gccaacaactacgcccgaggtcattacaccgtcgggaaggagatcatcgacggagtcatg
gagcgaattcggaaaatgacggatcagtgcaccggtctgcagggattcctggtcttccac
agcttcggagggggcaccggttcaggtttcacctctctcctgatggagcgtctgtcgcta
gactacggcaagaaagcaaagctggagtttgccgtgtacccagctccccaggtgtccacg
gcggtggtggagccctacaacgccatcctgaccacccacaccaccctggagcactccgac
tgcgccttcatggtggacaacgaggccatctacgacatctgccggcgcaacatggacatc
gagagtccgggatacaccaacctcaacagactgattggtcagatcgtgtcctccatcacg
gcctcgctccgtttcgacggcgccctaaacgtcgacctgacggagttccagaccaacctg
gttccattccctcgcatccacttccctctggtgacttattcgcccatcatctctgcggag
aaggcgtaccacgagcagctgaccgtgtccgagatcaccagctcctgctttgaaccgacc
aatcagatggtcaaatgcgatcctcgtcaaggcaagtacatggcctgttgcatgctgtac
cgaggggacgtcctccccaaagacgtgaacgccgccatagcaagcatcaagacccgccgc
tccatccagtttgttgactggtgcccgactggattcaaggtgggcatcaattatcagcct
ccaactgcagtccctggaggcgacctggccaaagttcagcgtgctgtgtgcatgctgagc
aacaccaccgccatttctgaggcctggtcccgcctcgaccacaagtttgacctgatgtac
gccaagcgtgcgtttgttcattggtacgtgggcgagggcatggaggagggggagttcgcg
gaggccagagaggacctggcctgcctggagaaggattatgaggagttgggccggatgagt
tccgactctgaaaacgacgatgaagaagtctag

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