Oryzias melastigma (Indian medaka): 112159642
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Entry
112159642 CDS
T07439
Symbol
rab42a
Name
(RefSeq) ras-related protein Rab-42a
KO
K07925
Ras-related protein Rab-39B
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
112159642 (rab42a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oml04131
]
112159642 (rab42a)
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
oml04031
]
112159642 (rab42a)
Membrane trafficking [BR:
oml04131
]
Autophagy
Other autophagy associated proteins
Rab GTPases
112159642 (rab42a)
GTP-binding proteins [BR:
oml04031
]
Small (monomeric) G-proteins
Rab Family
Rab39/42 [OT]
112159642 (rab42a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
Gtr1_RagA
MMR_HSR1
RsgA_GTPase
SRPRB
Motif
Other DBs
NCBI-GeneID:
112159642
NCBI-ProteinID:
XP_024149629
Ensembl:
ENSOMEG00000020418
UniProt:
A0A3B3DVT6
LinkDB
All DBs
Position
LG11:17867156..17877735
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AA seq
218 aa
AA seq
DB search
MDALWQYQFRIILLGDSTVGKSSLLKRFTDGIYSDVADPTVGVDFYARSLDIEPGVKIKL
QLWDTAGQERFRSITTSYYRNSVGGLLVFDLTNRKTFDHVREWHKEVSEHILPHHMVYIL
IGHKSDLQKDRKVSRDEAEQLAAELGIRYVETSAKCNSNVERAFELLTRDIYELMKMGEI
ETRDGWDGVKSGLTAKVLYPGEDEEELATASAEKGCHC
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atggatgctctgtggcagtaccagttcaggatcatcctcctcggggactccacggtgggg
aagtcgtcgctgctgaagcgcttcacggacgggatttacagcgacgtggcggaccccacg
gtcggcgtggatttttatgcgcgctcgctcgatattgagcccggggtgaaaatcaagctg
cagctctgggacacggccggccaggaacggttcaggtccatcacaacatcatattaccgc
aactccgttggagggctgctcgtctttgacctcaccaaccgcaaaacctttgaccatgtg
agggaatggcacaaggaggtgagcgagcacatcctgcctcaccacatggtctacatcctc
atcggccacaaaagcgacctccagaaagaccgcaaggtgagtcgggatgaggcggagcag
cttgcggctgagctgggaatccgctacgtcgagacttcggccaagtgcaacagcaatgtg
gagcgggcctttgagctgcttaccagagacatctacgagcttatgaagatgggcgagatc
gagacccgggatggctgggatggggtaaagagcggtcttactgctaaagtcctttaccca
ggagaggatgaagaggaactcgccaccgcgtctgctgaaaagggatgccactgctga
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