Oryzias melastigma (Indian medaka): 112159662
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Entry
112159662 CDS
T07439
Symbol
sema3h
Name
(RefSeq) sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3H isoform X1
KO
K06840
semaphorin 3
Organism
oml
Oryzias melastigma (Indian medaka)
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Gene cluster
GFIT
Motif
Pfam:
Sema
Ig_2
V-set
Ig_3
ig
PSI
I-set
Motif
Other DBs
NCBI-GeneID:
112159662
NCBI-ProteinID:
XP_024149644
Ensembl:
ENSOMEG00000007975
UniProt:
A0A3B3BN50
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Position
LG7:2138440..2222238
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AA seq
762 aa
AA seq
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MYLLVASALLIQLGSTLTGAWRASQPRLQFTHSELIQNGRLLTLPLVAGDLHSLLLDEDR
KRLYVAMKDNLLSTSLDDITQNPRKLYWPASPDRVQECLMAGKDPELECANFLRVLQHFN
QTHLYVCGTGAFNPRCSFIHTSIFLQSEHQTLFYSQTECGKGKCPYDPFQKTASAVVDGE
LYAGITSDFMSRDSAFFRSLGSRHVIRTEQYDSTWLQDAQFVRVAPLSETDNPEDDKVYV
FFTERAQEAEGAAGKVLYSRVARVCKNDIGGQRSLVNKWSTFQKARMVCSVPGPDGLQTH
FDQLQDIFILNGKDKKNPLIYGLFTTSSDILNGSAVCVYRMEDVVRAFKGNFLHKEGPQY
KWAEFTGKVPYPRPGTCPSSTYGSYSSTREYPDDVIFFSRTHPLLQENVLPLGERPLLVR
VGINYKFSKLLVDRVEAVDSTYDVLFIGTDSGLVLKAIHLPREHGQSQEVTLEQMQVFQH
RAPVTAMTLSKKKQWLFVGSKEGVSQLALYQCELYGQACAECCLARDPYCTWDGHACSPY
MPSVRRRNARHLGEDEDPLTQCVRQGAGLQVEAEQRVMLVAEGNSTYLECLPRSRHAAVT
WYKQAGENSPELNQVVTGDQLVVIERGVLIRRAELSHGGVYHCQVEEHGYHWTAVTVRLA
VWSSSANRVHGSLSGSSYQGAGTLPWYEDVMALIHPGNLGQHCKALGYRPPRNHRRHGDI
VMMKKERGEKQKHGAGRGGGGGGRPVGRKSRSKPQQRAPRSA
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atgtatttgctggtggcatcagcgctcctaatccagctggggtccactctgacgggagcg
tggagagcatctcagccgagactgcagttcactcactccgagctcatccagaacggtcgg
ttgctgacactgcccctggtggccggagacctgcactccctgctgcttgacgaagacagg
aagcgtttgtacgtggccatgaaagacaacctgctgtccaccagcttagatgatataacg
cagaatccacgaaagttgtactggccagccagcccggaccgcgtccaagaatgtcttatg
gctggaaaagacccagagttggagtgtgctaacttcctgcgagttctgcagcatttcaat
cagactcatttgtatgtatgcggcaccggagcattcaacccccgctgctcctttattcat
accagcatcttccttcagtcggagcaccagactctcttctacagccagacagagtgtggc
aaaggaaaatgcccttatgacccgttccagaaaacagcatctgctgttgttgatggagag
ctgtatgctggcatcacctcagacttcatgagtcgggactctgctttcttccgtagtctt
ggcagcagacacgttatccgcactgagcagtacgactccacctggctgcaggatgcccaa
tttgtgcgggtagcgccactgtctgaaactgataacccagaggatgataaagtctacgtg
ttctttactgagcgcgctcaggaggcagagggggctgctgggaaggtgctctactcaaga
gtggcgcgcgtgtgcaagaatgacattggaggccagaggagtttagtcaataagtggagc
accttccagaaggctcgcatggtatgctcggttccaggaccagatggcctacagacacat
ttcgaccagctgcaggacatctttatcctcaatggaaaagacaagaagaatcctctcatc
tacggcctgtttaccacttcaagtgatatcctgaacggttcagctgtttgtgtttatcga
atggaggatgtggttcgagctttcaaaggaaacttcctgcataaagaggggccgcagtat
aagtgggcagagttcacaggaaaagttccttatccacggcctggaacctgtcccagcagc
acttatggaagctacagctcaaccagagaatatcctgacgacgtcatcttcttcagcagg
actcacccgctgctgcaggaaaatgtgcttccactgggagagcgccccctattggtcaga
gttggcatcaactacaagttcagcaagctgctggtggacagagtggaggcggtggatagc
acttatgatgtcttgttcatcgggacagactctgggcttgtgcttaaggccatccatcta
cccagagaacatggacagagtcaggaggtcactctggagcagatgcaggtctttcagcac
cgagcgccggtgacagcaatgacactttcaaagaagaagcagtggttgtttgtgggctcc
aaggagggcgtgtcccagctggcgctgtaccagtgtgagctgtacggccaggcctgcgct
gagtgctgcctggccagagatccctactgcacctgggacggacatgcctgcagcccctac
atgccctccgtgcgccggagaaacgctcgtcacttaggagaagatgaagatccactgact
cagtgtgtccgacagggagctgggctgcaggtggaggcagagcagagagtgatgctggtt
gccgagggtaacagcacctacctggagtgtcttcctcggtccagacatgctgcagtgact
tggtacaaacaagctggagagaacagtcctgaactcaatcaggtggtaacaggtgaccag
ctggtggtgatcgagcgcggcgtcctcattaggcgagccgagctttctcacggcggcgtc
taccactgtcaggtggaggagcacggctatcactggacggcggtcactgtccgcctcgcc
gtttggagctcctctgctaaccgcgtccacggctcgctgtctggctcctcatatcagggc
gcgggaaccctgccctggtacgaggatgtgatggccctcatacacccgggaaacttgggc
cagcactgcaaggctctagggtaccgccccccacgcaaccaccgtcgccatggcgacatc
gtgatgatgaagaaggagcggggagagaagcaaaagcatggggcaggaagaggaggagga
ggaggaggacgtccagtggggaggaagagcaggagcaaaccacagcaaagggcacctcgg
agcgcttga
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