KEGG   Oryzias melastigma (Indian medaka): 112159667
Entry
112159667         CDS       T07439                                 
Symbol
nsfl1c
Name
(RefSeq) NSFL1 cofactor p47 isoform X1
  KO
K14012  UBX domain-containing protein 1
Organism
oml  Oryzias melastigma (Indian medaka)
Pathway
oml04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:oml00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    112159667 (nsfl1c)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:oml04131]
    112159667 (nsfl1c)
Membrane trafficking [BR:oml04131]
 SNARE
  SNARE associated proteins
   Others
    112159667 (nsfl1c)
SSDB
Motif
Pfam: SEP UBX UBA_4 UBA_8 Spt20_SEP UBA_OTUD7A_B TAP_C
Other DBs
NCBI-GeneID: 112159667
NCBI-ProteinID: XP_024149656
Ensembl: ENSOMEG00000009092
LinkDB
Position
LG7:complement(1436559..1443405)
AA seq 373 aa
MASQEESIREFVAVTDVDEERARFFLESAGWNLQLALASFFEDGADDDIVTLPQPEGGSS
VSRSAGPSSQPRVTSLGDLMDMAEDDNDEEEGQRFFAGGSERSGQQIVGPPKKKSSNEVV
EDLFKRAKEHGAVPLDRSGKGPEPSRAKAFLGGGYRLGAAPEEESAYVAGESRASNSQQD
VHVVLKLWKSGFSLDDGELRNYSDPGNANFLDAIRRGEIPLELRQRTRGGQVNLDMEDHR
DEDYVKPKMAFKAFEGEGQKLGSATPELVSVPPLSQQDQAANEAQASASVNLDPSQPTTN
IQIRLADGGKLVQKFNHTHRVSDLRQFVAAARPTMAAREFVLMTTFPNKELSDESLTLQQ
ANLLNAVIVQRLK
NT seq 1122 nt   +upstreamnt  +downstreamnt
atggcgagtcaagaagagtctatcagagagttcgtggctgttactgatgtggacgaggag
agagcccgcttcttcttggagtccgcgggctggaacctacagctcgctcttgccagcttc
tttgaagatggcgccgacgacgacatagtgactcttccccaacccgagggaggatcctcg
gtttcccggtccgcaggccccagcagtcagcccagagtgacctccttaggagacctgatg
gacatggcagaggatgacaatgatgaggaggaaggccagaggtttttcgcgggtggatca
gagcgcagcggacagcagatcgtcggacctcctaagaagaagagctccaacgaggtggtg
gaggatctgttcaaaagagccaaggaacacggagccgtgcctttggaccggagcgggaaa
ggaccagaaccgagcagggcaaaggcctttcttggtggaggttacaggctgggagcagct
cctgaggaggagtccgcctatgtggccggagagagtcgcgcctccaacagtcaacaggat
gtccacgtggttctgaagctgtggaagagcggctttagtctggacgacggcgagctcaga
aactacagcgaccccggaaacgcaaacttcctggatgccatcagaagaggggagattcct
ctggagctcaggcagcgtactcgggggggccaggtcaacctggacatggaagaccaccga
gatgaagactacgtcaagcccaaaatggcctttaaggccttcgagggtgaagggcagaag
ctgggaagtgccactccagaactggtctcagttccgccgttgtcccagcaggaccaggct
gcgaatgaggcgcaagccagcgcctctgtaaacctcgacccctcccagcccacaaccaac
atccaaatccgcctggctgacggggggaagctggtccagaagttcaaccacacccacagg
gtgtcagacctccggcaatttgtggcggcagcccggcccaccatggctgccagagagttt
gtcctcatgaccacctttcctaacaaggagctgtcggatgagagcctgacgctgcagcag
gccaacctcctcaacgccgttatcgtccagcggctaaagtga

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