Oryzias melastigma (Indian medaka): 112159697
Help
Entry
112159697 CDS
T07439
Symbol
top1
Name
(RefSeq) DNA topoisomerase 1
KO
K03163
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
oml03032
]
112159697 (top1)
Enzymes [BR:
oml01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
112159697 (top1)
DNA replication proteins [BR:
oml03032
]
Eukaryotic type
DNA Topoisomerases
112159697 (top1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Topoisom_I_N
Topo_C_assoc
SDH_protease
Motif
Other DBs
NCBI-GeneID:
112159697
NCBI-ProteinID:
XP_024149698
LinkDB
All DBs
Position
LG7:10999731..11012314
Genome browser
AA seq
765 aa
AA seq
DB search
MSGDHGHRDSQVSCGTNGSEIQKHKDKHKDKDHKHKDHKKEKGDKIKHSNSEHKEHSEKK
HKDKEKLKHSNGGSDKHKEKHKEKDKDKKREEKSKSSHSEKPKKEKENGYVRETSPAAIK
SEPEENNGFYPSPQHKPSKREYDDEELEYKPKKVKVELDKKAKKRKYEYGDDEEEEDVKH
KKKSKDKKAAEGKKAKKEAEDKWKWWEEERYTDGSKWRFLEHKGPVFAPAYEPLPEKVKF
YYNAKPMKLSASAEEVATFFAKMLDHEYSTKDIFRKNFYKDWRKEMTSEEKSIITDLNKC
DFSEMNEYFKAQSEARKQMSKEEKQKIKEENERLLSEYGFCIMDNHKERIGNFRIEPPGL
FRGRGDHPKMGMLKRRIRPEDVIINCSKDSKHPKPPPGTKWKEVRHDNKVTWLASWTENI
QGSIKYIMLNPSSRIKGEKDWQKYETARRLKKCVDRIRTQYRDDWKSKEMRIRQRAVALY
FIDKLALRAGNEKEEGETADTVGCCSLRVEHIKLFPKMDEQEYVVEFDFLGKDSIRYYNK
IPVEKRVFKNLQLFLENKQPEDDLFDRLNTSILNKHLQELMDGLTAKVFRTYNASITLQQ
QLKELTCPDDSIPAKILSYNRANRAVAILCNHQRAPPKTFEKSMQNLQTKIDEKQNQLSA
ARKQLKAAKANHKASHDDKSKKTVEVKRKAVQRIEEQLMKLQMQATDREENKQIALGTSK
LNYLDPRISVAWCKKWGIPIEKIYNKTQREKFAWAIDMAEKDYEF
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atgagtggagatcatggacatcgagactctcaggtcagctgtggaaccaatggaagcgaa
attcagaaacataaagacaagcacaaagacaaagatcacaaacacaaagatcacaagaaa
gagaaaggagacaaaattaagcacagcaacagtgaacacaaggagcactcggagaagaaa
cacaaagacaaagagaagctgaagcacagcaatggaggatcagacaaacacaaagaaaaa
cacaaagagaaagacaaagacaagaagagggaagaaaagagcaaatcatcccattcagaa
aagccaaaaaaggagaaagaaaatggatatgtcagagagacaagtccagcagccataaag
agtgaacctgaagaaaacaatggcttctacccctctccccaacacaagccctccaaacgg
gagtatgatgatgaagaacttgaatacaagcccaaaaaagtgaaggtggaacttgacaaa
aaagccaaaaagcggaaatatgagtacggcgacgatgaggaagaagaggatgtcaagcac
aaaaagaagtcaaaagacaaaaaagcagcagaaggaaagaaagccaaaaaagaagcagaa
gacaagtggaaatggtgggaggaggaaagatatacagacggctctaaatggcgatttctt
gaacataaaggtccagtgtttgctcctgcatatgaacctttacctgaaaaagtgaaattt
tattataatgcgaaaccaatgaaacttagtgcttctgctgaggaggtagccacatttttt
gcaaagatgttagaccacgagtattctacaaaagacatcttcaggaagaatttctataaa
gactggaggaaggaaatgacttcagaagagaaatcaataattactgacctgaacaagtgt
gacttcagtgaaatgaatgagtactttaaagcccaatctgaggcccgcaagcagatgtct
aaggaggagaaacagaaaatcaaagaggaaaatgagcggctcctctcagagtacggcttt
tgtattatggacaaccacaaagagaggatcgggaacttccgcattgagccaccaggcctt
ttccggggacgaggcgaccaccccaagatgggaatgctgaaacggcgcatcagacctgaa
gatgtcatcataaactgtagcaaagactccaagcatcccaaacctccccctggtacaaag
tggaaggaggttcgtcacgacaacaaagtgacctggttagcttcatggaccgagaacatc
cagggctccatcaagtacatcatgctgaaccctagttccaggatcaagggggagaaagat
tggcagaagtatgagaccgcccggcgcttgaagaaatgtgtcgatcgaattcgtactcaa
tatcgggatgactggaagtcaaaagagatgaggatcaggcagagagctgtggcgttgtat
tttatagataaactggcactgagggcaggtaatgagaaggaagaaggggagacggcagac
actgtggggtgctgctcgctgcgggtggagcacatcaaactgtttcccaagatggatgag
caggagtacgtggtggagtttgacttcttgggaaaagactccatccgctactacaacaag
atcccagtggaaaaacgggtttttaaaaacctccagctgtttctggagaacaaacagcca
gaagacgacctttttgaccggcttaatacctccattctgaataagcatttgcaggaacta
atggatggacttacagctaaggtttttcgtacctacaatgcttccatcacgctgcagcag
caacttaaagaacttacttgccccgatgacagcattccagccaagatcctgtcttacaat
cgagccaaccgagctgtggccattctttgtaaccaccagagagctccgcccaaaacattt
gagaagtccatgcaaaatcttcagactaagattgatgagaaacaaaaccaactgtctgca
gctcggaagcagctaaaggctgccaaggctaatcacaaggcttctcacgatgacaagagc
aaaaagaccgtagaagtgaagcgtaaagctgtacagaggatagaagaacagctgatgaag
ttacagatgcaggcaacggacagagaggaaaacaagcagattgcattggggacctccaag
ctcaattatctggatccacgcatttctgttgcttggtgcaagaagtggggcattcctatt
gagaagatctacaacaaaacccagagggagaagtttgcctgggcgattgacatggcagaa
aaagattacgaattttaa
DBGET
integrated database retrieval system