Oryzias melastigma (Indian medaka): 112159793
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Entry
112159793 CDS
T07439
Symbol
l1cama
Name
(RefSeq) neural cell adhesion molecule L1.2 isoform X1
KO
K06550
L1 cell adhesion molecule
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
112159793 (l1cama)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oml04515
]
112159793 (l1cama)
04090 CD molecules [BR:
oml04090
]
112159793 (l1cama)
04091 Lectins [BR:
oml04091
]
112159793 (l1cama)
Cell adhesion molecules [BR:
oml04515
]
Immunoglobulin superfamily
L1 family
112159793 (l1cama)
CD molecules [BR:
oml04090
]
Proteins
112159793 (l1cama)
Lectins [BR:
oml04091
]
I-type lectins (Siglecs)
112159793 (l1cama)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
fn3
Ig_2
ig
V-set
Ig_DSCAM-DSCAML_C
C2-set_2
Bravo_FIGEY
Pur_ac_phosph_N
C2-set_3
Motif
Other DBs
NCBI-GeneID:
112159793
NCBI-ProteinID:
XP_024149857
Ensembl:
ENSOMEG00000018404
LinkDB
All DBs
Position
LG7:8034420..8079412
Genome browser
AA seq
1272 aa
AA seq
DB search
MARVQQQQVCSRGQRSSHLPLVFLTFLCFGAQAVIQIPSNYHISDIKRPPVIVNPPKSVI
VVGVDEFIMSCEASGTPEPSFTWTKDGHKFDPRSEPHLKVSEHLGSFEFKAYNGSNMVNL
KNYQGKYVCYASNDLGTAMSKEATLSIDGLPSLQKEKVSTFKADEGSNITLKCNPPESSM
VPVIHWMDWKLRHIELSDRVVVGKDGNLYFAYLNTSDSRDDYICNLQYMETRTILTKDAI
SLQVKPSNSVVRKRRPHMITPTGPTSTYLVLRGQTFDLECIAQGFPTPQVMWLRKDGELS
ESRTVKEFFNHRLRFLNISESDGGEYQCIAENTQGKAKHTFMLTVEAAPYWIKEPVSQLY
AAGETVRLDCQADGTPSPTIRWTVNGGPLPENSKRIRVESGSLILEQVEFGDTAVYQCRA
SNKHGTIFTNTHVYVINLPPQILTKDGKIYLHTEGQKALLECKTFGSPKPKVMWERGGSL
LLADPRVNLLTSGALEISNVTFDDKGLYSCNVQNSNLSITAELEVFNRTVILSMPRELKV
QPGNEALFPCNALVDSNFRDPQILWRKDNQKLQESISDTKYTFDESNLIIADVNTEDEGV
YTCEVITSLDMAKANGTLILIDRPDPPSNLLLADPDNRVVTLRWTPGDDHNSPVQEYVVE
FEDQSLKERGWQKLEKVRGNKDHAVLSLWPYMSYKFRISAINDVGKSNPSLPSEIYNTSA
EAPNKNPEYVRSESVHPDTLVIDWKEMEKHEFNGPDFHYKVLWRRAVGSGPKWHENITKE
SHVIIGDVGTYVAFEIKVQAANAIGDGPDPDPIIGYSGEDVPLESPMDVGVVLINSTTVK
VTWAPIDRELVRGKLLGYKIHLTWNGYRFHHSHGSTHTETTIVEKTGPNEEKKVISNLRP
FSSYNLAVTVFNNKGEGPPSDALPFETDEGVPGPPAVLNLHSPSETEMTMQWRPPVHPNG
ILTGYVLQYQEITNNTDSLIKEKTIDDPKITQHTLKGLDPHSRYRFYLIGRTATGNGEPI
MKIMKTIPDALPIGINLTGGENLVNVSWGVKRKNRHTDFEIHYHDGNESNWKKIEKLNSS
QSFYQLQGLTPGSTYHLQFVYEKKVFFKAHVNTTTSAAMQKSFATQGWFISVVSAAVLLL
LILLILCFIKRSKGGKYSVKDKEDGPMDSEARPMKDETFGEYRSLESDLEEKQTASQPSL
CEDSKLCSDNNLDFNGSSVITTELNLDESLVSEISRPSVQEGFHSLPPNSTFNPVPVSSA
TNGVSNLVTIPD
NT seq
3819 nt
NT seq
+upstream
nt +downstream
nt
atggctcgcgtgcagcaacagcaggtctgcagtagggggcagcgctcctcccacctccct
cttgttttcctcaccttcctttgcttcggtgcccaagcagtcatacaaataccctccaac
taccacataagtgatatcaagagacctcctgtgatcgttaatcctccaaagtcggtcata
gttgtgggtgtggatgagttcatcatgagctgtgaagcctctggaacacctgaacccagt
ttcacgtggacaaaggatggacacaagtttgacccacgcagtgaaccgcacctgaaggtt
tcagagcacttgggctcatttgaattcaaagcatataatggtagcaacatggtcaacctg
aagaattaccaaggcaaatatgtctgctacgcatccaatgacctggggacagccatgtcc
aaagaggccacactcagcattgatggtctaccttctctgcagaaagaaaaagtttccact
tttaaggcggatgagggatctaatatcacgttaaagtgtaatcctccggagagctccatg
gtgcccgtcatccactggatggactggaaactgcgccacattgagctaagcgatcgggtg
gtagtgggaaaggatggcaacctgtactttgcttatctgaatacctccgactccagggat
gactacatctgcaacctccagtacatggaaactcgcacgattctgacgaaagacgccatt
tcccttcaggtcaaaccctcaaattcggtagtgcggaaacggagaccccacatgataact
ccgactggacccacgagcacgtacctggtcctcaggggacagacctttgatctggagtgc
atcgcgcaaggctttccaactcctcaagtgatgtggttgagaaaagacggcgagctttcg
gaatcccggactgtcaaagagttttttaaccaccgcctacgcttcctaaatatctctgaa
agtgacgggggagagtaccagtgcatagctgaaaacacccaggggaaagccaaacacact
ttcatgttgactgtggaagctgctccttattggatcaaagagccagttagtcagctttac
gctgctggtgagactgtcagattagattgccaggcagacggcaccccctctcccaccatc
cgttggaccgtcaacgggggtccccttccagaaaactctaagcgtatcagggtggagagt
gggtccctcatccttgagcaggtggagtttggagacactgccgtctaccagtgccgggcc
tccaacaaacatggaaccatcttcaccaacacgcatgtctacgtcatcaatctaccccct
caaattcttactaaagatgggaagatctacttacatacagaagggcagaaggctttactg
gagtgcaagacctttggttctccaaaacctaaagtcatgtgggaaagagggggctctttg
cttctcgctgatccaagagtgaacctgctcaccagtggggctcttgagatctctaatgtc
accttcgatgataaggggctctacagctgcaatgtacagaacagcaacttgtcaatcact
gctgaactggaggtgttcaacagaaccgtgatcctgtctatgccacgggagctgaaggtg
cagcctggaaacgaggcattattcccatgtaatgcccttgttgattccaattttagagac
cctcagattctgtggaggaaggacaatcagaagcttcaggaatccatcagcgatacaaag
tacacatttgatgaatcaaacctcatcatagctgatgtgaacacagaagatgagggggtg
tacacctgtgaagtcatcactagcctggacatggctaaagccaacggcactcttatttta
attgatcgcccagacccccccagcaacctcctgcttgcagatcctgacaaccgcgttgtc
acactcagatggactcctggagatgaccacaacagccctgtgcaagagtatgtggtagag
tttgaagatcaaagtttgaaggaaagaggttggcaaaagctggagaaagtgcgaggcaac
aaagaccatgctgtcctttcactgtggccatatatgtcctacaagttccggatcagtgcc
atcaacgatgttggcaaaagtaaccccagcttaccatctgaaatctacaatacaagtgct
gaagctccaaacaaaaacccagagtatgtcaggagtgagtccgtacacccagacactttg
gtcattgactggaaggaaatggaaaagcatgaattcaatggccctgactttcactataag
gtgctgtggaggcgagcagtgggcagcggaccgaagtggcacgaaaacataacaaaagag
tcacatgttattattggtgatgtcggcacttatgttgcttttgaaatcaaagttcaggct
gccaacgcgattggagatggacctgacccagaccctatcattgggtattcaggggaagat
gttccactcgagagtccaatggacgttggagttgttctgataaacagcactacagttaaa
gtgacctgggcaccgatagatagagagctggtcagaggaaaactgcttggatacaagata
cacctgacctggaatggttacagatttcatcatagtcatggatctacacatactgagacc
actatagtggaaaaaactggacccaatgaggagaagaaggtcatcagtaatcttagacca
ttttcatcgtataatctggctgtcactgttttcaacaacaagggagagggacctccttct
gacgcgctgccgttcgagaccgacgagggagtacctggtcctccagcagtcctgaatctc
cacagcccatcagagacagaaatgaccatgcaatggagacctcctgtccatcctaatgga
attctcaccggatatgtgctgcagtaccaagagataactaataatactgacagccttata
aaagaaaaaacaatagatgaccctaagatcactcaacacacgctgaaaggtctggaccct
cacagcagataccgcttctacctgatcggacgcacagctactggaaacggagagccgatc
atgaagatcatgaagaccattccagatgccctacctatagggatcaacttgactgggggg
gaaaacttagttaatgtcagctggggggtcaagaggaaaaacaggcacactgatttcgag
atacactaccatgatggcaatgagagtaattggaagaaaatagagaagttaaactcctct
cagtcgttctaccagctccagggattgacccctggctctacttatcacctacaattcgtc
tacgaaaaaaaagttttctttaaagcccatgtcaacactacaacatcagcagcaatgcag
aaaagctttgcaacacagggctggttcatcagtgttgtgagcgccgccgtgctgctgctg
ctgatactgctcatcctctgcttcatcaagaggagtaaaggaggaaagtactcagtgaaa
gataaagaagatgggccgatggactcagaagctcgaccaatgaaggatgaaacctttgga
gagtatagatctcttgaaagtgatcttgaggagaagcagacagccagtcagccatccctg
tgtgaggacagcaagctgtgcagcgacaacaacctggactttaacggcagcagcgtcatc
accactgagctcaacctggacgagtctctggtcagcgagatcagccgtccaagcgtccaa
gagggtttccacagtctgccaccgaactccaccttcaaccccgttcctgtctcttctgct
accaacggcgtgtccaacttggtcaccatccctgactaa
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integrated database retrieval system
