Oryzias melastigma (Indian medaka): 112159819
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Entry
112159819 CDS
T07439
Symbol
spo11
Name
(RefSeq) meiotic recombination protein SPO11 isoform X1
KO
K10878
meiotic recombination protein SPO11
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oml03036
]
112159819 (spo11)
Chromosome and associated proteins [BR:
oml03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
112159819 (spo11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TOP6A-Spo11_Toprim
TP6A_N
Motif
Other DBs
NCBI-GeneID:
112159819
NCBI-ProteinID:
XP_024149892
Ensembl:
ENSOMEG00000007582
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Position
LG7:complement(13877316..13885673)
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AA seq
414 aa
AA seq
DB search
MGARREVTTGGILGKKKEKKTSRVMESYGTQFFSQIDKLRDQLLISIDGVTDRECVEEEL
SPREILTRIESVILGIVDSLSKNEAPVLLLPNRSSWSNVDFDSGMGLQMSSEHSVTNVRS
NCPSSVTRFAQILKILSVIYRLVQGNSYATKRDVYYNNTQLFGSQRSVDIIVDDISCMLK
VSRRALHVLATSKGLIAGDLCYLEEDGTRIDCRSSSAAVSVSSNIYGIRNIVSSAKFVLI
VEKDATFQRLLNDDFCAKLSPCIMITGKGVPDVNSRLMVKKLWDTLQIPIFALVDADPHG
FEIMCIYKYGSVAMSFEAHSLTVPSVMWLGLLPSDLQRLRVPKSSLLPLARTDESKLSSL
LKRPYLASHPEWQKELELMQQSKVKAEIQSLADISPDFLTSIYLPNKLRYGGWL
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgggagcaaggcgggaagttacaacaggaggcattctgggaaaaaagaaagaaaaaaaa
acaagcagggtgatggagtcctacggtacacaatttttctcacaaatcgacaagcttcgt
gatcagcttttgatcagtatcgatggggtgacagatagagaatgtgttgaagaggaactc
agtccgcgagaaattctgactcgcattgaaagcgtcattttgggaatagtggacagtctg
tccaaaaatgaggcccctgtcctgctgctgcccaacaggtcaagctggtccaatgtcgat
tttgacagtgggatggggcttcagatgagctcagaacattctgtcaccaatgtaagaagc
aactgtccttcatctgtcacaagatttgctcagattctcaagattctctcggtcatttac
aggctcgtgcagggcaactcttatgctacaaagagagatgtatattacaacaacactcag
ctgttcggatctcagagaagtgtggacattatagtagatgacatctcctgcatgctgaaa
gtttctcggagggccttgcatgtgttggccacatccaaaggcttaattgccggggatctc
tgctacttggaagaagacggcaccaggatcgactgccgctccagctctgctgccgtttca
gtttcgtcaaacatctacggcattagaaacattgtgtcatcagccaaatttgtcctgata
gtcgagaaggacgcaaccttccagaggctgttaaacgacgacttctgcgcaaagctctct
ccttgcatcatgatcacaggtaaaggagtgccggatgtcaacagccggctgatggtgaaa
aagctgtgggacacgttgcagattcccatcttcgccctggtggatgcggaccctcatggg
tttgagatcatgtgtatctacaaatatggatcagtggccatgtcgttcgaggcccacagt
ctgactgttcccagcgttatgtggctaggcctcctcccctccgacttacagaggttgagg
gttcccaaaagttccttacttcccctcgccaggacagatgagagcaaactcagcagcctt
ctgaagcgcccctacttagccagccacccagaatggcagaaagaattggagctgatgcag
cagagtaaagtaaaagctgaaatccagtctctggcagatatttctcctgactttctcaca
agcatctacctgcccaataagctgcgctatggaggatggttatga
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