Oryzias melastigma (Indian medaka): 112159995
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Entry
112159995 CDS
T07439
Symbol
appa
Name
(RefSeq) amyloid beta (A4) precursor protein a isoform X1
KO
K04520
amyloid beta A4 protein
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
112159995 (appa)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
oml01002
]
112159995 (appa)
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
oml00535
]
112159995 (appa)
00536 Glycosaminoglycan binding proteins [BR:
oml00536
]
112159995 (appa)
Peptidases and inhibitors [BR:
oml01002
]
Peptidase inhibitors
Family I2: Kunitz - BPTI family
112159995 (appa)
Proteoglycans [BR:
oml00535
]
Cell surface proteoglycans
Others
112159995 (appa)
Glycosaminoglycan binding proteins [BR:
oml00536
]
Heparan sulfate / Heparin
Others
112159995 (appa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
APP_E2
APP_N
APP_Cu_bd
APP_amyloid
Beta-APP
Kunitz_BPTI
Insulin_TMD
Motif
Other DBs
NCBI-GeneID:
112159995
NCBI-ProteinID:
XP_024150058
Ensembl:
ENSOMEG00000006503
LinkDB
All DBs
Position
LG2:complement(3237132..3269945)
Genome browser
AA seq
772 aa
AA seq
DB search
MGRGVVLLLVAAVVSALAVEVPTDVSMGLLAEPQVAMFCGKLNMHINVQTGKWESDPSGT
KSCIGTKEGILQYCQEVYPELQITNVVEANQPVSIQSWCKKGRKQCRGHMHIVVPYRCLV
GEFVSDALLVPDKCKFLHQERMDQCESHLHWHTVAKESCGDRTMTLHDYGMLLPCGIDRF
KGVEFVCCPTEVERNADSAERDTDDSDVWWGGVDTDYADNSRLWEPEPTEQQEEPKPSVA
EEDDDEETPEEDDEEEEDGLDNDQDGDGEEDEEVVEEDDDDEDDQTDDFDALDDEAGEPT
ASVAMTTTTTTTTESVEEVVRDVCWANAETGPCRALLTRWFFDRAEGRCVPFIYGGCGGN
RNNFESEEYCMSVCSSVLPTAKPSSPDAVDHYLETPADENEHAHFQKAKESLEAKHRERM
SQVMREWEEAEREAKNLPRADKKAVIQRFQEKVEALEQEAAGERQQLVETHMARVEALLN
DRRRLALESYLTALQEDPPRPRHVFSLLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQI
RPQVLTHLRVIEERMNQSLGLLYKVPGVADDIQDQVEVLQREQAEMAQQLANLQTDVRVS
YGNDALMPNQELGDGQSDLLPQEDTGFIHPESFNQPNTENQVELVDSRPSFDRGVPTRPV
SGMKMDAVPELRMETDDRQSAEYAVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIATVIVI
TLVMLRKKQYTSIHHGVIEVDAAVTPEERHLSKMQQNGYENPTYKLFEQFQN
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atggggcgcggagtagttttactgctggtggcagcagtggtgtcagcgctggccgtggag
gtgcccacggacgtgtcgatggggctgctggccgagccgcaggttgccatgttctgcggg
aagctcaacatgcacatcaacgtgcagacgggcaagtgggagtccgacccctccggcacc
aagagctgcatcggcaccaaggaggggatcctgcagtactgccaggaggtgtatccggag
ctccagatcaccaacgtggtggaggccaaccagccggtcagcatccagagctggtgcaag
aaggggcgcaagcagtgccgcggccacatgcacatcgtggttccctaccgctgcctggtg
ggagagtttgtgagcgacgctctgctggtccctgacaagtgtaagttcctgcaccaggag
cgcatggaccagtgtgagagccacctgcactggcacactgttgccaaggagtcttgtgga
gacagaactatgaccctccacgattatgggatgctgttgccgtgcggcatcgaccgcttc
aagggagtggagttcgtctgctgccccaccgaggtagagcgcaacgcagacagcgccgaa
cgggacactgacgactccgacgtgtggtggggcggcgtggatacggactatgccgacaac
agcaggttgtgggagccggagccaacggagcagcaggaggagcccaaaccatctgtggca
gaggaggacgatgacgaagagacgcccgaggaggatgacgaggaggaggaggacggcctg
gacaacgaccaggacggggatggagaggaggacgaagaggtggtggaggaggatgacgac
gatgaggacgaccaaaccgacgactttgacgcgcttgacgatgaggccggcgaacccacc
gccagcgtcgccatgaccacgaccaccaccaccaccaccgagtctgtggaggaggtcgtc
agagatgtgtgctgggccaacgcagagaccggcccgtgccgggccctgctgacccgctgg
ttctttgaccgcgcggagggccgctgcgttccctttatctacggcggctgtggaggcaac
aggaataactttgagtcagaggagtactgcatgtctgtctgcagtagcgtccttcccacc
gccaagcccagctcccccgacgccgtggaccactacctggagacgcccgccgacgagaac
gagcacgcccacttccagaaagccaaggagagcctggaggccaagcaccgcgagaggatg
tcccaggtgatgagggaatgggaggaggcagagagggaagccaagaaccttccacgcgcc
gacaagaaggcggtgattcagcgtttccaggagaaggtggaggccctggagcaggaggca
gccggcgagcgccagcagctggtggagacgcacatggcgcgggtggaggcgctgctgaac
gaccgccgccgcctggcgctggagagctacctgactgcgctgcaggaggatcctcccagg
cctcgacatgtcttcagcttgctgaagaagtacgtgcgcgccgagcagaaggaccggcag
cacaccctcaaacacttcgaacacgtccgcatggttgaccccaagaaggcggcgcagatt
cgaccccaggtgctgacccatctgcgagtcattgaggagcgcatgaaccagtctctgggt
ctgctctacaaagtgcccggcgtggccgacgatatccaggaccaagtggaagtcctccag
agggagcaggcggagatggcccagcagctcgccaacctgcagaccgacgtgagggtcagc
tacggaaacgacgccctgatgcccaaccaggagctgggagacggccagagcgacctgctg
cctcaggaggacaccggcttcatccaccccgagagcttcaaccagcccaacacggagaac
caggtggagctggtcgattctcgccccagtttcgaccgaggcgttcccactcgaccagtg
tctgggatgaagatggacgccgttccggagctgcggatggagacagatgaccgacagagt
gctgaatacgcagttcaccatcagaagctggtcttcttcgcggaggacgtgggctccaac
aagggcgccatcatcgggctgatggtggggggcgtggtcatcgccacggtgatcgtcatc
accctggtgatgctgaggaagaagcagtacacctccatccaccacggagtgatcgaggtt
gacgccgccgtcacccccgaggagcgccacctgtccaagatgcagcagaacggctacgag
aatccgacctacaagttgtttgagcagtttcagaactga
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