KEGG   Oryzias melastigma (Indian medaka): 112160002
Entry
112160002         CDS       T07439                                 
Name
(RefSeq) ras-related protein ORAB-1
  KO
K07874  Ras-related protein Rab-1A
Organism
oml  Oryzias melastigma (Indian medaka)
Pathway
oml04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:oml00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    112160002
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:oml04131]
    112160002
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:oml04147]
    112160002
   04031 GTP-binding proteins [BR:oml04031]
    112160002
Membrane trafficking [BR:oml04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Rab GTPases
    112160002
 Autophagy
  Other autophagy associated proteins
    112160002
Exosome [BR:oml04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   112160002
  Exosomal proteins of other body fluids (saliva and urine)
   112160002
  Exosomal proteins of colorectal cancer cells
   112160002
GTP-binding proteins [BR:oml04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab1/35 [OT]
    112160002
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU RsgA_GTPase MMR_HSR1 Gtr1_RagA SRPRB FeoB_N AAA ABC_tran AAA_7 AAA_29 LANC_like AAA_16 AAA_22 Septin AAA_5 Dioxygenase_N CRAL_TRIO_2 TniB
Other DBs
NCBI-GeneID: 112160002
NCBI-ProteinID: XP_024150067
Ensembl: ENSOMEG00000006036
LinkDB
Position
LG2:complement(3775858..3786486)
AA seq 203 aa
MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQ
IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVG
NKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGATAG
GGEKPNVKLTPGTSVKASSGGCC
NT seq 612 nt   +upstreamnt  +downstreamnt
atgaatcccgaatatgattatttattcaagctgctcctgattggtgactccggtgttgga
aagtcttgccttcttctcagatttgcagatgatacatacacagaaagttacattagcact
attggtgttgacttcaaaatacgaaccatagagcttgatggaaagaccattaaacttcag
atttgggacacagccggacaggagaggtttcgtacaatcacatccagctactacagaggt
gcccatggtatcattgtagtgtacgatgtcacagatcaggagtccttcaacaatgtcaaa
cagtggctacaggagattgaccgctacgccagtgaaaacgtcaacaagctcttggttggg
aacaagtgtgacttgacaacaaagaaggtggtggattacacaacagcaaaggagtttgct
gactctctgggaattccctttttggaaaccagtgcaaaaaatgcaacaaatgtagagcaa
gcattcatgacgatggctgcagaaatcaagaagaggatgggccccggggccacagctggg
ggaggagagaagcccaacgtgaagctgactccaggcacatccgtaaaggcttcgtcagga
ggctgctgctga

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