Oryzias melastigma (Indian medaka): 112160016
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Entry
112160016 CDS
T07439
Name
(RefSeq) SLIT and NTRK-like protein 1
KO
K25832
SLIT and NTRK-like protein 1
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
112160016
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
LRR_LRWD1
LRR_14
LRRNT
Orexin
LRR_9
Motif
Other DBs
NCBI-GeneID:
112160016
NCBI-ProteinID:
XP_024150089
Ensembl:
ENSOMEG00000005123
LinkDB
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Position
LG2:complement(6859899..6862850)
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AA seq
681 aa
AA seq
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MLLWIVLLNAALCAAGGNVTRDVCKEQVCSCREVEGDLHIDCEKRSFASLQHLTGPSSHF
YHLLLQGNSLSRLFPNEFANFYNAVSLHLESNGLHDIVPGAFLGLQLVKRLHINNNKIRS
FRKSTFLGLDDLEYLQADFNLLRDIDPAVFRDLNKLEVLILNDNLISALPTNVFQHVPIT
HLDLRGNRIKTLPYEGVLEQIPGIVEVLLEDNPWDCSCELLSLKEWLENIPRDALIGRVV
CEAPTRLQGSDLNETSEADLCPSQSGIDTSLVAPPTQEEASQPTPYKPTPGGHGPRSRSK
SRENWQLKTKPTASAAGEGREPLRNASCPQPCSCRSVGTRRGLGVNCEGKKLESLSNLKP
KPLSAHELNMRDNNIHAVKRNQLLGFSSLHLLDLGGNNIKGIDNGTFQNQSELRWLYLDK
NYLDALVAEMFVGLGNLEYLSLEYNNIQLVAAGAFSPMPNLGVLLLNNNLLKSLPVNAFL
GISLSKISLHNNYFPHLPVAGVLDQLSSIVQVDLHGNPWDCSCTIVPFKQWTEKLGPDAI
VSDLKCESPERFWKRDFRFVRNDLLCPHRTPPTPLSKAFTQESGTRSNSYLEPNRVSISV
LVPGLLLVFVTSAFTVVGMLVFILRNRKRSKRREGNSSASEINSLQTVCDSSYWHSGPYH
ADGSAHRGFDCSAHLSAANDA
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgctgctttggatcgtgctgctgaatgcggctctctgcgcggctggcgggaacgtgacg
cgggacgtgtgcaaggagcaggtgtgctcgtgcagggaggtggagggggacctgcacatc
gactgcgagaagaggagcttcgccagcctgcagcacctcaccggccccagctcgcacttc
tatcacctgctgctgcaggggaactcgctgtccaggctgttccccaacgagttcgccaac
ttctacaacgccgtcagcctccacctggagagcaacggcctgcacgacatcgtcccgggg
gcgttcctggggcttcagctggtcaagcggctgcacatcaacaacaacaagatccgctcg
ttccggaagagcacgtttctggggctggacgacctggagtacctgcaggcggacttcaac
ctgctgcgggacatcgacccggccgtgttcagggacctgaacaaacttgaagtgctgatc
ctcaacgacaacctcatcagcgcgctgcccaccaacgtgttccagcacgtgcccatcacg
cacctggacctgcgcgggaaccggatcaagacgttgccttatgagggggtgctggagcag
atccccgggatcgtggaggtgctgctggaggacaacccgtgggactgcagctgcgagctg
ctgtccctgaaggagtggctggagaacattccgcgcgacgcgctcatcgggagggtcgtg
tgcgaggcgcccacgcgcctgcagggcagcgacctgaacgagacgtcggaggccgacctg
tgcccctcgcagagcggcatcgacaccagcctcgtcgcccccccgacgcaggaggaggcc
tcgcagcccacgccttacaagcccacgcccgggggccacgggccccggagccgctccaag
tctcgcgagaactggcagctgaagaccaaacccaccgcgtcggcggcaggtgagggcagg
gagccgctgcgcaacgccagctgcccgcagccgtgcagctgcaggtccgtgggcacgcgc
agggggctgggggtcaactgcgagggcaagaagctggagagcctctccaacctgaagccc
aagcccctgagcgcgcacgagctaaacatgcgcgacaacaacatccacgcggtgaagcgc
aaccagctgctcggcttctccagcctgcacctgctcgacctgggcgggaacaacatcaag
gggatcgacaacggaaccttccagaaccagagcgagctgcgctggctctacctggataag
aactacctggacgcgctggtggcggagatgttcgtggggctggggaacctggaatacctg
agtttggaatacaacaacatccagctggtggcggcgggggccttcagccccatgccgaac
ctgggggttctgctgctcaacaacaacctgctcaagtctttgcccgtcaacgcctttctg
gggatttctttatccaagatcagcctgcacaacaactacttcccgcacctgcccgtggcc
ggcgtgctggaccagctcagctccatcgtgcaggtggacctgcacgggaacccgtgggat
tgctcgtgcaccatcgtgcccttcaagcagtggacggagaagctgggcccggacgccatc
gtcagcgacctgaagtgcgagtccccggagcgcttctggaagcgggacttccgcttcgtg
cgcaacgacctgctgtgcccgcaccggaccccgccgacgccgctctccaaggccttcacg
caggagtcgggcacgcgctcgaactcctatctggagcccaaccgggtgtccatctcggtg
ctggtgccgggcctgctgctggtgttcgtcacgtccgcgttcacggtggtgggcatgctc
gtgttcatcctgcgcaaccgcaagcgctcgaagcggcgcgagggcaactcgtccgcgtcc
gagatcaactcgctgcagacggtgtgcgactcttcctactggcacagcgggccctaccac
gcggacgggagcgcgcaccggggcttcgactgcagcgcgcacctctccgccgcaaacgac
gcctga
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