Oryzias melastigma (Indian medaka): 112160021
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Entry
112160021 CDS
T07439
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta-3 isoform X1
KO
K05181
gamma-aminobutyric acid receptor subunit beta
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04080
Neuroactive ligand-receptor interaction
oml04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
112160021
04082 Neuroactive ligand signaling
112160021
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oml04040
]
112160021
Ion channels [BR:
oml04040
]
Ligand-gated channels
GABA-A
112160021
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
112160021
NCBI-ProteinID:
XP_024150098
Ensembl:
ENSOMEG00000000110
LinkDB
All DBs
Position
LG2:complement(7193923..7250620)
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AA seq
507 aa
AA seq
DB search
MNAPHRVRQIRVLSALVIGSIVCCAKSVNEPGNMSIVKQTVDKLLKGYDIRLRPDFGGPP
VAVGMSIDVASIDMVSEVNMDYTLTMYFQQYWRDKRLAYLGIPLNLTLDNRVADQLWVPD
TYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIE
SYGYTTDDIEFYWKGGESAVTGVTRIELPQFSIVDYKLVSKNVVFSTGAYPRLSLSFKLK
RNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKI
PYVKAIDMYLMGCFVMVFLALLEYAFVNYIFFGRGPQMQKKLAEKAEKANNERSAKYDAA
REAGSRTASLKRSNQVKGLRHSRSAEPHGHGNILLTTLEIHNEVAGGEITTSVADIRNSQ
SMVQLDSTASSHIQYRKQSGGIGPRSASRHSLDRSAQMKRSRLRRRSSQLKIKIPDLTDV
NAIDRWSRIIFPSVFSLFNLIYWLYYV
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgaacgctccgcacagggttcggcaaatacgcgtcctgtcggcgctggttatcggttcg
attgtgtgctgcgccaaaagcgtcaacgaaccgggcaacatgtccatcgtgaagcagacg
gtggataaactactgaaggggtacgacatccgactgagaccggactttggaggtccccct
gttgcagtcggcatgagcatagacgtggccagcatagacatggtgtcagaagtcaacatg
gattacaccctgaccatgtatttccagcagtactggcgggacaagcgtctagcctaccta
ggaatccccctcaacttgactctggacaacagggtggctgaccagctctgggtccctgac
acctacttcctcaacgacaagaagtcttttgtccatggagtgacggtcaagaaccgcatg
atccgcctgcatccagacgggaccgttctctacgggctccggataaccaccacggctgct
tgtatgatggatctcaggaggtaccccctggacgagcagaactgcactctggagattgag
agctatggctacaccacagatgacatcgagttctactggaaaggcggcgagtcggcagtg
acgggggtgacgcgcatcgagctgccgcagttctccatcgtcgattacaaactggtgtcc
aaaaacgtggtcttctcaacaggtgcctaccctcgactgtctctgagcttcaagctgaaa
agaaacatcggctacttcatcctgcagacctacatgccatccatcctgatcaccatcctc
tcctgggtatccttctggataaactatgacgcgtcggcggccagagtggctctcgggatc
accacggtgctgactatgaccaccatcaacactcacttgagagagacactacccaagatc
ccctacgtcaaggccatcgacatgtacctgatgggatgcttcgtcatggtcttcctggct
cttctcgagtatgcctttgtaaactacatcttcttcgggaggggccctcagatgcaaaag
aagctggcggaaaaagcagagaaggccaataacgagaggtcagccaagtatgacgcagca
agggaggcaggtagtaggaccgcatcgcttaaacggtccaatcaggttaaaggtcttcgc
cactcacgctcggcggaaccccatggccatgggaacatcctgctgaccacccttgagatc
cacaacgaggtagctggtggtgagatcaccacaagcgtggcagacattagaaactctcag
tccatggtccaactggacagcacggcttcgtcacacatccagtaccgaaagcagagcggt
gggatcggaccccgctccgccagccgccattctttggaccggtctgctcaaatgaaacgc
agccgcctgcggaggcggtcctcccagttaaaaatcaaaatcccagacctaaccgatgtg
aacgccatcgaccgctggtcacgcatcatcttcccttcagttttctcgctgttcaatctc
atctactggctctactatgtctga
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