Oryzias melastigma (Indian medaka): 112160023
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Entry
112160023 CDS
T07439
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-5
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04080
Neuroactive ligand-receptor interaction
oml04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
112160023
04082 Neuroactive ligand signaling
112160023
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oml04040
]
112160023
Ion channels [BR:
oml04040
]
Ligand-gated channels
GABA-A
112160023
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
DUF5874
Motif
Other DBs
NCBI-GeneID:
112160023
NCBI-ProteinID:
XP_024150099
Ensembl:
ENSOMEG00000004993
LinkDB
All DBs
Position
LG2:7254718..7296155
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AA seq
467 aa
AA seq
DB search
MDLHSAVRIKVSRFPAMAGLVLSLLLLCGCQSSLGQSPPETQKETGPNDNSTVFTRILDG
LLDGYDNRLRPGLGENVTEIKTNIFVTSFGPVSDTEMEYTIDVFFRQSWKDERLCFKGPM
EMLPLNNLLASNIWTPDTFFLNGKKSIAHNMTTPNKLLRLKDDGTLLYTMRLTISAECPM
QLEDFPMDAHACPLKFGSYAYPVSEVVYTWTQGAAKSVVVAEDGSRLNQYHLIGQTAGTE
DIHTSRGQYTVMMAHFYLKRKIGYFVIQTYMPCFMTVILSQVSFWLNRESVPARTVFGVT
TVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRSWAWDGKK
AMEAQHPKKRDPMVLSQKPNNVCSAGVNYTPNLTKDVAISTISNTTSVQLRGTETKAVDP
KKTYNSVSKIDKMSRIVFPVLFGTFNLVYWATYLNREPVVKGVVTST
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atggatctccattcagctgtcagaatcaaggtgagcagatttccagccatggccggactc
gtcctctctctgctcctgctgtgcggatgccaaagcagtcttggccagtctccccccgag
actcagaaggagacgggacccaacgacaacagtacggtcttcacccggattctggacggg
cttctggacggatacgacaacaggctgcggccggggctcggagaaaacgtcaccgagatc
aagacgaacatttttgtcaccagcttcggccccgtttccgacaccgagatggaatacacc
atcgacgtgttcttccgtcagagctggaaggacgagcgtctttgcttcaaagggcccatg
gagatgctgccgttgaacaacctgctggccagcaacatctggacccccgacaccttcttc
ctcaacggcaagaagtcgattgcgcacaacatgaccacgcccaataagctgctgaggctg
aaggatgacggcacgctgctgtacaccatgagactgaccatctcagccgagtgccccatg
cagctggaggactttcccatggacgctcacgcctgcccgctcaagtttggcagctatgcc
tatcccgtctcagaggtggtctacacttggactcaaggtgccgccaagtcggtagtggtg
gctgaagacggctccaggctcaaccagtaccacctgatcgggcaaaccgccggcacagag
gacatccacacaagcagaggacagtacacagtgatgatggcccacttctacttgaaaagg
aagattggatattttgtcatccagacgtacatgccatgcttcatgacggttatcctgtcc
caggtgtcattttggcttaacagggaatcggttcctgctaggaccgtctttggagtgacc
accgtgttgaccatgaccaccctcagcatcagtgcccggaactctctccccaaagtggcc
tatgcgaccgccatggactggttcattgctgtatgctacgcttttgtcttttctgctctc
attgagtttgctacagtgaactacttcaccaagagaagctgggcctgggacggcaagaaa
gcaatggaggcgcagcacccaaagaaacgggatcccatggtactgtcgcagaagcccaac
aacgtttgctcggcaggtgtcaactacacccccaacctcaccaaggacgtggccatctcc
accatctccaacaccacgtcggtgcagctgcgcggcaccgagaccaaagcggtggacccc
aagaagacctacaacagcgtcagcaagatcgacaagatgtcacggatagtgttccccgtc
ctcttcggcaccttcaacctcgtctactgggccacgtacctgaacagagaaccggtggtg
aagggagttgtcacttcaacataa
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