KEGG   Oryzias melastigma (Indian medaka): 112160041
Entry
112160041         CDS       T07439                                 
Name
(RefSeq) splicing factor U2AF 35 kDa subunit isoform X1
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
oml  Oryzias melastigma (Indian medaka)
Pathway
oml03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:oml00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    112160041
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:oml03041]
    112160041
Spliceosome [BR:oml03041]
 Complex A
  U2 snRNP components
   U2 related factors
    112160041
 Complex B
    112160041
SSDB
Motif
Pfam: zf-CCCH RRM_1 Torus zf_CCCH_4 zf-CCCH_2
Other DBs
NCBI-GeneID: 112160041
NCBI-ProteinID: XP_024150133
Ensembl: ENSOMEG00000009326
LinkDB
Position
LG2:complement(1235635..1243975)
AA seq 227 aa
MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTILIQNIYRNPQNSAQ
TADASRCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRRE
EDAEKAVMDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE
LRRELYGRRRKRHRSRSRSRERRSRSRDRRRDRERRRSRDRERSGRF
NT seq 684 nt   +upstreamnt  +downstreamnt
atggcggagtatctggcatccattttcggcacagagaaagacaaggtcaactgttccttc
tatttcaaaattggagcttgcagacatggagaccgctgctcaagattgcataacaaaccg
acctttagtcagaccatcctgatccagaacatctaccgtaatcctcaaaacagcgctcaa
actgctgatgcttctcgttgtgccgtcagcgatgtggaaatgcaggaacattacgacgag
ttctttgaggaagtcttcacagagatggaggagaagtacggagaggtggaggagatgaac
gtgtgcgataacttaggtgaccaccttgttggcaacgtctacgtgaagttccgccgcgag
gaggacgcggagaaggccgtcatggacctgaacaaccgctggttcaacggccagcccatc
catgcagagctgtcgcccgtcaccgacttcagggaagcctgctgccgtcagtatgaaatg
ggagagtgcacccgcgggggcttctgcaacttcatgcacctgaaacccatatccagggaa
cttcggagggagctgtacggccgccgcaggaaaaggcaccgctctcgctcacgctcccgc
gaacggcgctcccgctccagggatcgacgacgggaccgcgagaggcggaggtcgagggac
cgagaacgctccggacgcttctag

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