KEGG   Oryzias melastigma (Indian medaka): 112160056
Entry
112160056         CDS       T07439                                 
Symbol
gart
Name
(RefSeq) trifunctional purine biosynthetic protein adenosine-3
  KO
K11787  phosphoribosylamine--glycine ligase / phosphoribosylglycinamide formyltransferase / phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.4.13 2.1.2.2 6.3.3.1]
Organism
oml  Oryzias melastigma (Indian medaka)
Pathway
oml00230  Purine metabolism
oml00670  One carbon pool by folate
oml01100  Metabolic pathways
Module
oml_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP
Brite
KEGG Orthology (KO) [BR:oml00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    112160056 (gart)
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    112160056 (gart)
Enzymes [BR:oml01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.2  Hydroxymethyl-, formyl- and related transferases
    2.1.2.2  phosphoribosylglycinamide formyltransferase 1
     112160056 (gart)
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.3  Cyclo-ligases
    6.3.3.1  phosphoribosylformylglycinamidine cyclo-ligase
     112160056 (gart)
   6.3.4  Other carbon-nitrogen ligases
    6.3.4.13  phosphoribosylamine---glycine ligase
     112160056 (gart)
SSDB
Motif
Pfam: GARS_A Formyl_trans_N GARS_N AIRS_C GARS_C AIRS ATP-grasp ATP-grasp_3 CPSase_L_D2 ATP-grasp_4 RimK ATP-grasp_2
Other DBs
NCBI-GeneID: 112160056
NCBI-ProteinID: XP_024150158
Ensembl: ENSOMEG00000009525
UniProt: A0A3B3BSL7
LinkDB
Position
LG2:1160381..1172269
AA seq 1006 aa
MGERVLVVGGGGREHALAWKLAQSPQIQQVLVAPGNAGTAHCGKISNSEVSVSNHAILAQ
FCKDHHVGLVVVGPEAPLAAGIVDDLTAAGVQCFGPSAKAAQLEASKSFAKAFMERHGIP
TARYGSFSDPQEACSFIRTADFPALVVKASGLAAGKGVIVAKDQEEACRAVMDIMKDGAF
GSAGETVVVEELLEGEEVSCLCFSDGTSVSPMPPAQDHKRLLDGDLGPNTGGMGAYCPTP
QVSQELLQQITESVLQKTVDGMREEGAPYVGVLYAGLMLTEQGPKVLEFNCRLGDPECQV
LLPLLHSDLYQVFINTLNGKLACNAPVWQQDGSAVTVVLASAGYPGSYRKGVEVSGLSLV
QDMGLQVFHAGTALKEGGVVSSGGRVLTVTAVRPTLEAALLAANQGVATIGFQGGVYRRD
IGHQAIAHLKRRRGLTYRDSGVDVSAGNRLVDAIKPLAKATARPGCDAELGGFAGLFDVK
AAGFVDPILVSGTDGVGTKLKVAQACGKHGSLGQDLVAMCVNDVLAQGAEPLFFLDYFSC
GRLDVDVAAAVVGGIAKACELAGCALLGGETAEMPGVYSEGEYDLAGFCVGAVERGALLP
RLQEIAEGDLLIGVSSSGVHSNGFSLVRKVLERAKLSYSCPAPFGEAGQTVGEVLLTPTK
IYSRLLLPVLRSGAVKAYAHITGGGLLENIPRVLPEKLAVDLDASRWSIPAVFSWLYKEG
GLSEEEMARTFNCGLGAVLVVAPPDAQRVLRQLQEEEAWIVGSLVHRQPGSQPVLVRNLN
QSLTKAGPAEQKDGYHGNSTTPQKKTRVGVLISGTGTNLQALIEQTRRPSSSAQIVVVIS
NRPGVQGLKRAALAGIQTRVVDHKLFGSRAEFDGTIDRVLEEFGVELVCLAGFMRILTGT
FVKKWTGKLLNIHPSLLPSFKGVNAQKQALEAGVRVAGCTVHFVAEEVDAGAIIVQEAVP
VLPTDTEETLSERIREAEHRAFPAAMELVSSGSVKLGTDGHIIWKS
NT seq 3021 nt   +upstreamnt  +downstreamnt
atgggggagcgggtgctggtggtcggcggcggagggcgggagcacgcgctggcctggaag
ctggcgcagtcgccgcagattcagcaggtcctggtggcgccggggaacgcggggacggcc
cactgcgggaagatcagcaactctgaagtctctgtgagcaaccacgccatcctggctcag
ttctgcaaggatcatcatgtgggtctggttgtagtggggcccgaggcgccgctggcggca
ggaatcgtggacgacctgacggcggcgggagttcagtgtttcggaccttcggccaaagcg
gctcagctggaggccagcaagagcttcgccaaagcctttatggaacgccacggcattcct
acagctcgctatggatccttcagcgacccgcaggaggcctgcagcttcatccgcacggca
gacttccccgctctggtggtgaaggccagcggcctggcggcagggaagggagtgatcgtg
gccaaagaccaggaggaggcctgtcgggctgtgatggacatcatgaaggacggagcgttc
ggatcagcaggagagacggtggtggtggaggagctcctagaaggagaggaggtgtcgtgt
ctgtgcttcagcgacggcacgtccgtctcgccgatgcccccagctcaggatcacaagcgg
ctgctggacggggatctgggtccgaacacgggcggcatgggagcttactgccccacccct
caggtgagccaggagctgctgcagcagatcacagagtcggttctacagaagacggttgac
gggatgcgagaggagggagctccttacgtaggtgtgctgtacgcggggctgatgctcacc
gagcaggggcccaaagtcctggagttcaactgccgccttggagacccggagtgtcaggtg
ctgctgccgctgctgcacagcgacctgtatcaggtcttcatcaacaccctcaacgggaag
ctggcctgtaacgcccccgtgtggcagcaggacggctctgcggtgacggtggtcctggcc
agtgccggataccccggttcctacaggaagggcgtggaggtctcaggtctgtctctggtt
caggacatggggctgcaggttttccacgccggcactgctctgaaagaagggggcgtggtc
tccagcggcggccgggtcctgaccgtcacggctgtccgacctaccctcgaggcggctctg
ctggcggccaatcagggcgtggcgaccatcgggttccagggcggcgtgtaccggcgcgac
attggacatcaggccatcgctcacctgaagcggcgcagaggcctgacctacagggacagc
ggggtggacgtctccgcaggaaaccggctggtggacgccatcaagcctctggccaaagcc
acggcgcgccccggatgtgacgctgaacttggaggcttcgccgggctctttgacgtgaag
gccgctggctttgtggaccccatcctggtttctgggacggacggcgtcgggactaagctg
aaggtcgctcaggcgtgtgggaagcacggcagtttgggtcaggacctggtggccatgtgt
gtgaatgacgttctggctcagggcgccgaaccgctcttcttcctggactacttctcctgt
ggccgcctggacgtggatgtagccgccgccgtggtgggcggcatcgccaaagcgtgtgag
ctggccggctgcgctctgctgggcggggagacggcggaaatgccgggcgtgtactctgag
ggggagtacgacctggccgggttctgcgtgggcgccgtggagcgcggcgctctgctgccc
cgactccaggagatcgcagagggagacctgctgatcggggtgtcctcctccggagtccac
agcaacggcttcagtctggtccgcaaagttctggagagagccaagctcagctacagctgc
cccgccccctttggagaagcgggtcagaccgtcggagaagttcttctgactcccactaag
atctacagccgcctcctcctccccgtgctccgcagcggcgccgtcaaggcctacgcccac
atcacaggcggggggctgctggagaacatcccccgggtgctgccggagaagctggcggta
gatttagacgcctccaggtggagcatccccgccgtcttctcctggctttacaaagagggg
ggcctgagcgaggaggagatggcccgcacgtttaactgcggtctgggggcggtgctggtc
gtggcccccccggatgctcagagggtgctgcgacagctgcaggaggaggaggcctggatc
gtgggttctctggttcaccggcagccaggttcacaacctgtgttggtccgcaacctcaac
caaagtctgacgaaggcggggccagcagaacaaaaggacggttaccacggcaacagcacc
acaccccagaagaagaccagagtcggagttctcatttccggcacaggaaccaaccttcag
gcgctcatcgagcagacccgacgtccgtccagctcggctcagattgtggtcgtcatttcc
aacagacccggtgttcagggactgaagagggcggcactcgctggcatccagacacgggtg
gtcgaccacaaactgtttggcagccgtgcggagtttgatggaaccattgaccgcgttctg
gaggagttcggcgtggagctggtgtgtctggccgggttcatgaggatcctcactggaacg
tttgtgaagaagtggacaggtaagctcctgaacatccacccgtcgctgctgccgtcattc
aaaggggtgaacgctcagaaacaggcgctggaggctggcgtccgcgtggcggggtgtacc
gtccactttgtggctgaggaggtggatgctggagccatcatcgttcaggaggcggttccc
gtcctccccacggatacggaagagacgctgtcggagcgcatcagggaggcggagcatagg
gcgtttcctgccgccatggagctggtgtccagtggttctgtgaagctgggaacagatgga
cacatcatatggaaaagttga

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