Oryzias melastigma (Indian medaka): 112160067
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Entry
112160067 CDS
T07439
Symbol
jarid2b
Name
(RefSeq) protein Jumonji
KO
K11478
protein Jumonji
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
112160067 (jarid2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oml03036
]
112160067 (jarid2b)
Chromosome and associated proteins [BR:
oml03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
112160067 (jarid2b)
Polycomb repressive complex (PRC) and associated proteins
PRC2.2
112160067 (jarid2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JmjC
ARID
JmjN
zf-C5HC2
Sec23_BS
Motif
Other DBs
NCBI-GeneID:
112160067
NCBI-ProteinID:
XP_024150178
Ensembl:
ENSOMEG00000012985
UniProt:
A0A3B3C2X3
LinkDB
All DBs
Position
LG11:15216181..15317242
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AA seq
1439 aa
AA seq
DB search
MSKERPKRNIIQKKYDDSDGIPWSEERVMRKVLYLSLKEFRTAQKRQLDGDCATNSNGSL
ANGQLNGTGSKGSHKEDGSLRSQGLHGNNGYGEDSPAKKRPRLQAQRKFAQSQPNSPSTT
PVKVADPNGLNGSLATGSSSSLSSLSSSSLSSSIQDLSRRKPKTEDFLTFLCLRGSPALP
SNMAYFGSSQEEEDLEEDEEEEENEVRNGGGVHSHGAGSSSQTPAAASCHSTPRKGKLPA
KQPVNGHVYPSHTKAGTRESPRPKGHGRDAPAPPLPPPPPPPPPLLRERSERAEAREHAR
ELQAMANARSSANGLPPRRAAEELRKQVSKVNGLMRASSAQAAGVSKRSRDIRLPSKTVK
KYTATVSKGHVTYTKAKLKELGKKTKLSSSNKHNNAASATSSANNHNQHSQPAASNGLAN
SGKAAAPAHHSNAKTRKQVLLSNGLHNASTNARPNGRLNGQRHNTLTNKELRQKHCQPSQ
SECPGREGLRNSKRRLEVVLNSVATGPVEQKAKPSGTDPKKAKLHSPPLETRSSSKKVHE
EKASKQTPPTTPVSNGHGAETAPPPKQTQPVTPPSKQTSPPSTPAANAEPLNQRPKRASA
GKLMLIRQAQQQQSRSHGRSSSSSSPSLGQNHSPNPCSGSTTSDPQQTSVSSSSSSSSPS
VPASTNSPGQLKPAAARPADRDKDWEREKDLTRQKERDQEKGWDGQRSKPEGWAALGEAP
VFRPGPREFQDPLVYLDAVREQAEVAGMCRVAPPPDWRPECKLNEEMRFVTQVQRVHMLG
RRWGPNVQRMACIRKHLKSQGITMDEPPVIGGCEVDLSRFFQLINDMGGMQQVMDLKKWT
KLADLLRIPKSAQDRLAKLQEAYLQYILSYDSLSAEERLRLLTEVLEEKKKLESRRGPLE
GLSDSSAPNGLSLPRYEPKNGLVGIVGGTTGHHRTNGVYHRLKELEAQVKAGRRRLFAQE
KQGKEDRPHREEPHPGQENGSLSGDQHKCIYKGKSVSLTNFFRIARNTMTMCFNKEPGAA
EVEQEYWRIVEQRDSHVAVHCGKVDTSTHGSGFPTGKSEPFSKHGWNLTVLPNNSGSILR
HLGAVPGVTVPWLNIGMIFSTSCWSRDQNRLPYIDYLHTGADCIWYSVPAEEKAKLDKVV
HTLLQANGTPGLEMLEKNIMISPEVLCREGIKVYRTVQRSGQFVVCFPGAFVSKVCCGYS
VSETVHFATPHWMNLGYEAAKDLKCRCIAKPFSMEKLLYQIATSESKRDNGLLLTTISAL
LKDLRNIEMHQRQELYKAGLLSSARYGTHDGGLGSVEGRKKPRGKWLALESSERRCQICQ
HLCYLSMVVQETDNVVFCLECALRYVEKHKSCRGLKMMYRYDEDQINSLVNQVCGRAMLK
NGSNGAGGGALIITNGGGGGDLFPAKASPAKRGPRKRATVEVSLARLSASHLPKAAAVS
NT seq
4320 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaggaaagacctaagaggaatatcattcaaaagaaatatgatgatagtgatggg
atcccgtggtcagaggagcgggttatgcgaaaggtcctttatctctccctaaaagagttt
aggacagcacagaaacggcagctggatggagactgtgccaccaactccaatggttctcta
gccaatggacagctgaatggcacagggtcaaagggcagccacaaagaagatgggtccttg
cgctctcagggcctgcacgggaacaatggctacggcgaggatagtcctgcaaaaaagagg
cctcggcttcaggctcagaggaagttcgcccagtcgcagcccaactcacccagcactaca
cctgtcaaagtggccgaccccaacggcttgaacggcagcctggccaccgggtcatcctct
tccctgtcatcgctgtcgtcctcatccctgtcgtcctccattcaggacctgtccagacgc
aagcctaagacggaggacttcctcaccttcctctgcctccgaggttctcctgccttgccc
agtaacatggcctactttggaagctcccaggaggaggaggacctggaggaggacgaagag
gaggaggaaaacgaggtgcggaatggaggaggcgtccactctcacggcgccggaagcagc
agccagaccccagccgccgcttcctgccactccacgccccgcaagggcaagctccctgcc
aagcagccagtcaatgggcatgtgtaccccagccacactaaagcggggaccagggaaagc
ccgaggcccaaggggcacggcagggacgcgcccgctccaccgctgccacctccaccacca
ccccccccacccctactgagggagcgcagtgaacgggcggaggcgcgggagcacgccagg
gagctgcaggccatggccaacgctcgcagctcggctaacggacttccaccgcgaagagca
gctgaagagctacggaagcaggtttcgaaagtgaatgggctgatgcgggcgagctcggca
caagctgctggcgtttccaaacggagccgcgacatccgactgccgtccaaaactgtgaag
aagtacacagccaccgtgtccaagggccacgtcacctacaccaaagccaaactgaaagaa
ctgggcaagaaaaccaaactcagcagcagcaacaaacataacaacgccgcctcggcaaca
tcttcagcgaacaatcacaatcagcacagccagccagcagccagcaacgggctggccaac
tcaggaaaagcagcagcaccagcccatcacagcaatgcaaaaacccgcaaacaggtgcta
ctgtccaatgggctgcacaacgcgtctaccaacgcccggcccaacggcaggctgaacggg
cagcggcacaacacgctgactaataaggagctccggcagaaacactgccagccaagccag
agtgaatgcccgggtcgagagggactgcgcaactccaaacggcgcctggaggtggtgctc
aattcggtggctacaggacccgtcgagcagaaagccaaacccagcggcacggatcctaag
aaggccaagctccactccccgcctctggagacgcgcagcagcagcaagaaagttcatgaa
gagaaggcgagcaagcaaaccccccccaccactccagtttctaacggacacggcgcagaa
actgcccctcctcctaaacaaactcagcctgttaccccaccctctaaacaaacctcacct
ccttctacaccagcagccaacgcggagccgctcaaccagagaccgaagcgagcgtcagcc
ggcaagctgatgttgatacgacaagcacagcagcagcagagccggtcgcacgggcgcagc
tcctcctcttcctccccgtcattaggacagaatcactcgccaaacccctgctccggcagc
actacctcagacccccaacagacgtccgtttcttcctcctcctcgtcctcctccccgtct
gtccctgcttccaccaacagcccgggccagctgaaaccagcagccgcgcggcccgccgac
cgcgacaaggactgggagcgcgagaaggacctgacccgtcagaaagagcgagaccaggag
aaggggtgggacggccagcggagcaagccggagggctgggcggcgctgggcgaggccccg
gtcttccggccaggcccaagggagttccaggacccgctggtgtacctggatgcagtaagg
gaacaggccgaggtggcgggcatgtgccgcgtggcgccgccgccggactggcggccggag
tgcaagctgaacgaggagatgcgttttgtaacacaggtgcagagggtccacatgcttggc
cggcgctggggccccaacgtgcagcgaatggcttgcatccgcaagcaccttaaatctcag
ggcattaccatggacgagccgccggtcatcggcggctgtgaagtggacctgtcgcggttt
ttccagctcatcaacgacatgggtggcatgcagcaggtgatggacctgaagaagtggacc
aagctggcagacctccttcgcatccccaagtccgcgcaggaccggctggccaagctgcag
gaggcctacctccagtacatcctctcctacgactcactcagtgccgaagagcgcctccga
ctgctgacagaggtgctggaggagaagaagaagctggagtcgcggcggggccccctggag
ggcctgtccgactcctcggcacccaacggactctcgctgccccgctacgagccaaagaac
gggctcgtcgggatcgtgggagggacgaccgggcaccaccgcaccaacggagtctatcac
cgcttgaaggaactggaggctcaggtcaaagcgggccggcgccggctcttcgctcaggaa
aaacaaggcaaagaggacaggccgcaccgggaggagccgcatccggggcaggagaacggg
agcttgtccggcgaccaacacaaatgtatctacaaggggaaatccgtgtccttgaccaac
ttcttcaggatagctcgcaacaccatgaccatgtgctttaacaaggagccgggggccgcc
gaggtcgagcaagagtactggaggatcgtggagcagagagactcccacgtggcagtgcat
tgtgggaaggtggacacgagcacacacggcagtggtttccccacaggaaagtcagagcca
ttttcaaaacatggttggaacctcactgtcctccccaataactctggatccatattgagg
catctgggtgctgtgccgggggtgactgttccctggctaaacattggcatgatcttttct
acctcatgctggtctagagaccaaaaccgccttccatatattgattacttacacactggt
gctgattgcatttggtattctgtccctgctgaggagaaggctaagctggacaaggtggtc
cacacactgcttcaagccaacggcaccccaggactagaaatgctggagaagaatatcatg
atctctccagaggtgctatgccgtgaaggcatcaaggtttaccgcacggtccagcggagt
ggccagtttgtggtctgcttccccggtgcctttgtctccaaagtgtgctgtggctacagc
gtgtcggagacggtccacttcgccacgccacactggatgaacctgggttatgaggccgca
aaggacctgaagtgtcgttgtatagccaaacccttctccatggagaagctactgtatcag
atcgccacctcggagtccaagagggacaatggccttcttctcaccaccatctctgcccta
ctcaaagacctcaggaacatagagatgcaccaacgtcaggaactttacaaggcgggtttg
ctctcttctgcccgctacggcacacacgacggcggcctggggtccgtcgagggccgcaag
aagcctcgcggaaaatggctggcgctggagtcatcagaaagacgctgccaaatctgtcaa
catctctgctacctgtccatggtggttcaagagacggataatgtggtcttctgcctggaa
tgtgcccttcgttacgtggagaaacacaaatcctgcagaggccttaagatgatgtaccga
tacgatgaggatcaaatcaacagtttggtgaaccaggtgtgtgggcgcgccatgttaaag
aacgggagcaacggcgccggagggggagctctcatcatcaccaacggcggcggcgggggg
gacctgttccctgctaaagcatcaccagccaagcgcgggccgagaaagcgcgccacggtg
gaggtgtccctggcccgtctgtccgccagccacctgcccaaagctgcagctgtgtcctga
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