KEGG   Oryzias melastigma (Indian medaka): 112160067
Entry
112160067         CDS       T07439                                 
Symbol
jarid2b
Name
(RefSeq) protein Jumonji
  KO
K11478  protein Jumonji
Organism
oml  Oryzias melastigma (Indian medaka)
Pathway
oml03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:oml00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    112160067 (jarid2b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:oml03036]
    112160067 (jarid2b)
Chromosome and associated proteins [BR:oml03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    112160067 (jarid2b)
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.2
     112160067 (jarid2b)
SSDB
Motif
Pfam: JmjC ARID JmjN zf-C5HC2 Sec23_BS
Other DBs
NCBI-GeneID: 112160067
NCBI-ProteinID: XP_024150178
Ensembl: ENSOMEG00000012985
UniProt: A0A3B3C2X3
LinkDB
Position
LG11:15216181..15317242
AA seq 1439 aa
MSKERPKRNIIQKKYDDSDGIPWSEERVMRKVLYLSLKEFRTAQKRQLDGDCATNSNGSL
ANGQLNGTGSKGSHKEDGSLRSQGLHGNNGYGEDSPAKKRPRLQAQRKFAQSQPNSPSTT
PVKVADPNGLNGSLATGSSSSLSSLSSSSLSSSIQDLSRRKPKTEDFLTFLCLRGSPALP
SNMAYFGSSQEEEDLEEDEEEEENEVRNGGGVHSHGAGSSSQTPAAASCHSTPRKGKLPA
KQPVNGHVYPSHTKAGTRESPRPKGHGRDAPAPPLPPPPPPPPPLLRERSERAEAREHAR
ELQAMANARSSANGLPPRRAAEELRKQVSKVNGLMRASSAQAAGVSKRSRDIRLPSKTVK
KYTATVSKGHVTYTKAKLKELGKKTKLSSSNKHNNAASATSSANNHNQHSQPAASNGLAN
SGKAAAPAHHSNAKTRKQVLLSNGLHNASTNARPNGRLNGQRHNTLTNKELRQKHCQPSQ
SECPGREGLRNSKRRLEVVLNSVATGPVEQKAKPSGTDPKKAKLHSPPLETRSSSKKVHE
EKASKQTPPTTPVSNGHGAETAPPPKQTQPVTPPSKQTSPPSTPAANAEPLNQRPKRASA
GKLMLIRQAQQQQSRSHGRSSSSSSPSLGQNHSPNPCSGSTTSDPQQTSVSSSSSSSSPS
VPASTNSPGQLKPAAARPADRDKDWEREKDLTRQKERDQEKGWDGQRSKPEGWAALGEAP
VFRPGPREFQDPLVYLDAVREQAEVAGMCRVAPPPDWRPECKLNEEMRFVTQVQRVHMLG
RRWGPNVQRMACIRKHLKSQGITMDEPPVIGGCEVDLSRFFQLINDMGGMQQVMDLKKWT
KLADLLRIPKSAQDRLAKLQEAYLQYILSYDSLSAEERLRLLTEVLEEKKKLESRRGPLE
GLSDSSAPNGLSLPRYEPKNGLVGIVGGTTGHHRTNGVYHRLKELEAQVKAGRRRLFAQE
KQGKEDRPHREEPHPGQENGSLSGDQHKCIYKGKSVSLTNFFRIARNTMTMCFNKEPGAA
EVEQEYWRIVEQRDSHVAVHCGKVDTSTHGSGFPTGKSEPFSKHGWNLTVLPNNSGSILR
HLGAVPGVTVPWLNIGMIFSTSCWSRDQNRLPYIDYLHTGADCIWYSVPAEEKAKLDKVV
HTLLQANGTPGLEMLEKNIMISPEVLCREGIKVYRTVQRSGQFVVCFPGAFVSKVCCGYS
VSETVHFATPHWMNLGYEAAKDLKCRCIAKPFSMEKLLYQIATSESKRDNGLLLTTISAL
LKDLRNIEMHQRQELYKAGLLSSARYGTHDGGLGSVEGRKKPRGKWLALESSERRCQICQ
HLCYLSMVVQETDNVVFCLECALRYVEKHKSCRGLKMMYRYDEDQINSLVNQVCGRAMLK
NGSNGAGGGALIITNGGGGGDLFPAKASPAKRGPRKRATVEVSLARLSASHLPKAAAVS
NT seq 4320 nt   +upstreamnt  +downstreamnt
atgagcaaggaaagacctaagaggaatatcattcaaaagaaatatgatgatagtgatggg
atcccgtggtcagaggagcgggttatgcgaaaggtcctttatctctccctaaaagagttt
aggacagcacagaaacggcagctggatggagactgtgccaccaactccaatggttctcta
gccaatggacagctgaatggcacagggtcaaagggcagccacaaagaagatgggtccttg
cgctctcagggcctgcacgggaacaatggctacggcgaggatagtcctgcaaaaaagagg
cctcggcttcaggctcagaggaagttcgcccagtcgcagcccaactcacccagcactaca
cctgtcaaagtggccgaccccaacggcttgaacggcagcctggccaccgggtcatcctct
tccctgtcatcgctgtcgtcctcatccctgtcgtcctccattcaggacctgtccagacgc
aagcctaagacggaggacttcctcaccttcctctgcctccgaggttctcctgccttgccc
agtaacatggcctactttggaagctcccaggaggaggaggacctggaggaggacgaagag
gaggaggaaaacgaggtgcggaatggaggaggcgtccactctcacggcgccggaagcagc
agccagaccccagccgccgcttcctgccactccacgccccgcaagggcaagctccctgcc
aagcagccagtcaatgggcatgtgtaccccagccacactaaagcggggaccagggaaagc
ccgaggcccaaggggcacggcagggacgcgcccgctccaccgctgccacctccaccacca
ccccccccacccctactgagggagcgcagtgaacgggcggaggcgcgggagcacgccagg
gagctgcaggccatggccaacgctcgcagctcggctaacggacttccaccgcgaagagca
gctgaagagctacggaagcaggtttcgaaagtgaatgggctgatgcgggcgagctcggca
caagctgctggcgtttccaaacggagccgcgacatccgactgccgtccaaaactgtgaag
aagtacacagccaccgtgtccaagggccacgtcacctacaccaaagccaaactgaaagaa
ctgggcaagaaaaccaaactcagcagcagcaacaaacataacaacgccgcctcggcaaca
tcttcagcgaacaatcacaatcagcacagccagccagcagccagcaacgggctggccaac
tcaggaaaagcagcagcaccagcccatcacagcaatgcaaaaacccgcaaacaggtgcta
ctgtccaatgggctgcacaacgcgtctaccaacgcccggcccaacggcaggctgaacggg
cagcggcacaacacgctgactaataaggagctccggcagaaacactgccagccaagccag
agtgaatgcccgggtcgagagggactgcgcaactccaaacggcgcctggaggtggtgctc
aattcggtggctacaggacccgtcgagcagaaagccaaacccagcggcacggatcctaag
aaggccaagctccactccccgcctctggagacgcgcagcagcagcaagaaagttcatgaa
gagaaggcgagcaagcaaaccccccccaccactccagtttctaacggacacggcgcagaa
actgcccctcctcctaaacaaactcagcctgttaccccaccctctaaacaaacctcacct
ccttctacaccagcagccaacgcggagccgctcaaccagagaccgaagcgagcgtcagcc
ggcaagctgatgttgatacgacaagcacagcagcagcagagccggtcgcacgggcgcagc
tcctcctcttcctccccgtcattaggacagaatcactcgccaaacccctgctccggcagc
actacctcagacccccaacagacgtccgtttcttcctcctcctcgtcctcctccccgtct
gtccctgcttccaccaacagcccgggccagctgaaaccagcagccgcgcggcccgccgac
cgcgacaaggactgggagcgcgagaaggacctgacccgtcagaaagagcgagaccaggag
aaggggtgggacggccagcggagcaagccggagggctgggcggcgctgggcgaggccccg
gtcttccggccaggcccaagggagttccaggacccgctggtgtacctggatgcagtaagg
gaacaggccgaggtggcgggcatgtgccgcgtggcgccgccgccggactggcggccggag
tgcaagctgaacgaggagatgcgttttgtaacacaggtgcagagggtccacatgcttggc
cggcgctggggccccaacgtgcagcgaatggcttgcatccgcaagcaccttaaatctcag
ggcattaccatggacgagccgccggtcatcggcggctgtgaagtggacctgtcgcggttt
ttccagctcatcaacgacatgggtggcatgcagcaggtgatggacctgaagaagtggacc
aagctggcagacctccttcgcatccccaagtccgcgcaggaccggctggccaagctgcag
gaggcctacctccagtacatcctctcctacgactcactcagtgccgaagagcgcctccga
ctgctgacagaggtgctggaggagaagaagaagctggagtcgcggcggggccccctggag
ggcctgtccgactcctcggcacccaacggactctcgctgccccgctacgagccaaagaac
gggctcgtcgggatcgtgggagggacgaccgggcaccaccgcaccaacggagtctatcac
cgcttgaaggaactggaggctcaggtcaaagcgggccggcgccggctcttcgctcaggaa
aaacaaggcaaagaggacaggccgcaccgggaggagccgcatccggggcaggagaacggg
agcttgtccggcgaccaacacaaatgtatctacaaggggaaatccgtgtccttgaccaac
ttcttcaggatagctcgcaacaccatgaccatgtgctttaacaaggagccgggggccgcc
gaggtcgagcaagagtactggaggatcgtggagcagagagactcccacgtggcagtgcat
tgtgggaaggtggacacgagcacacacggcagtggtttccccacaggaaagtcagagcca
ttttcaaaacatggttggaacctcactgtcctccccaataactctggatccatattgagg
catctgggtgctgtgccgggggtgactgttccctggctaaacattggcatgatcttttct
acctcatgctggtctagagaccaaaaccgccttccatatattgattacttacacactggt
gctgattgcatttggtattctgtccctgctgaggagaaggctaagctggacaaggtggtc
cacacactgcttcaagccaacggcaccccaggactagaaatgctggagaagaatatcatg
atctctccagaggtgctatgccgtgaaggcatcaaggtttaccgcacggtccagcggagt
ggccagtttgtggtctgcttccccggtgcctttgtctccaaagtgtgctgtggctacagc
gtgtcggagacggtccacttcgccacgccacactggatgaacctgggttatgaggccgca
aaggacctgaagtgtcgttgtatagccaaacccttctccatggagaagctactgtatcag
atcgccacctcggagtccaagagggacaatggccttcttctcaccaccatctctgcccta
ctcaaagacctcaggaacatagagatgcaccaacgtcaggaactttacaaggcgggtttg
ctctcttctgcccgctacggcacacacgacggcggcctggggtccgtcgagggccgcaag
aagcctcgcggaaaatggctggcgctggagtcatcagaaagacgctgccaaatctgtcaa
catctctgctacctgtccatggtggttcaagagacggataatgtggtcttctgcctggaa
tgtgcccttcgttacgtggagaaacacaaatcctgcagaggccttaagatgatgtaccga
tacgatgaggatcaaatcaacagtttggtgaaccaggtgtgtgggcgcgccatgttaaag
aacgggagcaacggcgccggagggggagctctcatcatcaccaacggcggcggcgggggg
gacctgttccctgctaaagcatcaccagccaagcgcgggccgagaaagcgcgccacggtg
gaggtgtccctggcccgtctgtccgccagccacctgcccaaagctgcagctgtgtcctga

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