Oryzias melastigma (Indian medaka): 112160068
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Entry
112160068 CDS
T07439
Symbol
mcf2la
Name
(RefSeq) guanine nucleotide exchange factor DBS isoform X1
KO
K20685
guanine nucleotide exchange factor MCF2
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oml04131
]
112160068 (mcf2la)
Membrane trafficking [BR:
oml04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
112160068 (mcf2la)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
Spectrin_5
CRAL_TRIO_2
PH
SH3_1
SH3_2
CRAL_TRIO
PH_10
Motif
Other DBs
NCBI-GeneID:
112160068
NCBI-ProteinID:
XP_024150175
Ensembl:
ENSOMEG00000008166
LinkDB
All DBs
Position
LG9:complement(16803121..16890380)
Genome browser
AA seq
1161 aa
AA seq
DB search
MALNRVSQLCHEITRLWLQLKLMTDDILQKEAGPLCAAEVGSELQKQFAILPGGRGTNGS
PIIIFPEYPDFSDLQEEELQNVLSYLTSVPSAAASGEGFILVIDRRLDRWTAVRATLLRI
AGSFPGILHLVLVLRPTTFFQRTISDLQLRFIRDDFKMKVPVVMLSSVTELHAYIDPGQL
TTEVGGTQEYNHDSWISHRTAIEAFALMVKTTAQTLQAFGTELAETELPNDAEATTNLLQ
VHTSKKELMKEDLKVALSQGRRLLEFINEPLLADPEYSLTHDEMENLATVQRLIGQLDET
ETAFEDFWERHRTKLEQCLQLRHFEHHFREIRAQLDVMFERLSGFSEVSVSPAHAEHVLR
ELGNHEEKAFELLDVALSLASEGDRLIENSHYAEDSIRPKCSELRGVCEEISSTLRHKKG
LLLRALELHHALEKASGWCEEGIFLLASQPVDRCQSQDGAEAALQELERYLDTAALHTLT
DCSAICCQYEAVLNAQLKDQIDKVFQKQISVQEMFEKRRISLKKLAAKQTRPVQPVAPRP
EVKSPLSSPSQERKERRYSADSALCKKGESPVLNGGTRHASLSEEEESLAVLRRHVMNEL
LETERAYVEELLCVLEGYAAEMDNPAMAHLIPSTLHSKKDILFGNMSEIYQFHKRTFLKE
LETYTDCPELVGRCFLERMKDLQIYEAYCQNKPRSESLWRQCSDCAFFQECQKKLEHKLG
LDSYLLKPVQRITKYQLLLKELLKYSKGCDGSDDLQEALSSILGILKAVNDSMHLIAITG
YEGNLSELGRLLMQGSFSVWTEHKKGHAKVKDLARFKPMQRHLFLHQKALLFCKKREENG
EGYEKAPSYSFKHSLSMSAVGITENAKGDNKKFEIWCNSREEVFIVQAPTPEIKTAWVNE
IRKVLTQQLKACRDARQQKSSDSVSPSTTSSSSICLSPFRSNAQKNQKKQEEKKAEPSPI
SDTNACSSPKHKDEAVTSPTTDRSSLAKKRFTLQGFSNLKSPKALSPEQTAKRHSVKSDP
TPFGFRGWSKASLSVDASEENDGYSSGEDPMNSDTEEDGVKKLAPGKYTVVADCEKAGPQ
ELSVKSGDMVQLIREGEEGQWFVKNLRTHKEGWVAAANLLSLISESKSSQSLSSSDGSVS
GNLSTSSSCSETYTSFSDIKP
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
atggctctgaaccgagtttcacaactctgccacgagatcaccaggctgtggctgcagctg
aagctgatgacagatgacatcctgcagaaggaggcggggcctctgtgtgcagcagaagtt
ggctctgaacttcagaaacagtttgccatcctgccagggggccgcgggacaaacggcagc
cccatcatcatcttcccagagtatccagacttcagtgatctgcaggaggaggagctccag
aatgtgctcagctacctcaccagcgtacccagcgccgcagcatcaggagagggcttcatc
ctggtcatcgaccgccgactggaccgatggaccgccgtcagggccaccctgctccgcatc
gcaggttcatttccgggtatcttgcacttggttttagtgttgcgtcccacaacctttttc
cagcggactatctcggacctccagttaagatttatcagggatgacttcaaaatgaaggtg
ccggtggtgatgctgagctcggtaacggagctccacgcgtacatcgacccaggacagctg
accacagaggtcggtggcacgcaggagtacaaccatgacagctggatctcacaccggacc
gccatcgaggcttttgccctcatggtgaagacaacagctcagaccctgcaggcctttggg
accgaactggctgagacggagctgcccaacgatgccgaagccaccacgaacctgctgcag
gtgcacacttccaagaaagagctgatgaaggaggacttgaaggtggcgctgtctcaagga
aggcgtctgctggagttcatcaacgagcctcttctggcagatcctgaatacagcctgacg
catgatgaaatggagaatctcgccacagtccaaagactcattggccagctggatgaaacc
gaaacggcgtttgaggatttctgggagcgccaccgcaccaaactggagcagtgtttgcag
ctccgtcactttgagcaccactttcgtgaaattcgggctcagctggatgtgatgtttgag
cggttatcaggtttctccgaggtcagcgtcagccctgcccatgccgaacacgtcctccgg
gaactcggcaaccacgaggagaaagcctttgaattgctggatgttgccctgtccctggcc
agtgaaggagacagactgatagaaaactcccactacgccgaggactccatccggcccaag
tgcagcgagctgagaggagtgtgtgaggagatcagctccacattgaggcacaagaagggc
ctcctgctcagagctctggagctccatcatgctctggagaaggcgtcagggtggtgcgag
gagggcatcttcctgctggctagccagcccgtggaccgctgccagtcccaggatggagcg
gaggcggctttgcaagaactggagcgatacctggacacagcagcactacacactctgaca
gactgcagtgccatctgctgtcagtacgaggcggtactcaacgctcagctcaaggaccag
atagataaagttttccaaaagcaaatctccgtccaggagatgtttgagaaaaggcgcatc
agtctgaagaaacttgctgccaaacaaacgagaccagttcagccagtagctccaagacca
gaagtcaagtctccactttcctctcccagtcaagagagaaaagagagaagatactctgca
gatagtgctctctgtaaaaagggggagtctccagttcttaatggtggcacaagacacgct
tctctttcagaagaagaggaaagcctggcagtccttcggcgtcatgtgatgaacgagctc
ctagagacagagagggcatacgtggaggagcttctgtgtgtgctggaggggtacgctgca
gagatggacaaccctgccatggcccatctcatccccagcaccctccacagcaaaaaggac
attctgtttggcaacatgtctgaaatctaccagtttcataagaggactttccttaaagaa
ctggagacgtatactgactgtccagagctggtgggccgctgctttttagaaaggatgaag
gatctgcagatctacgaggcttactgccagaacaaaccgcgctcagagagcctgtggaga
cagtgctctgactgtgccttcttccaggagtgccagaagaagctggaacacaaacttggt
ctggactcctacctccttaaaccggttcagagaatcaccaagtaccagctgctgcttaaa
gagttgttgaagtacagtaagggctgtgatggctcagatgacctgcaggaagctctttct
tccatcctcgggatcctgaaggccgtcaatgactccatgcacctcatcgccatcacagga
tatgagggtaacctgtcagagctgggtcgcctactgatgcaaggctccttcagcgtctgg
acggaacataagaaaggccacgccaaagtgaaggacctcgccaggttcaagcccatgcag
agacacttgtttctccatcagaaggcgctattgttctgcaagaagagggaggagaacggt
gagggctacgagaaggctccatcctacagcttcaaacactctctcagcatgagcgcggtg
gggatcacagagaatgcaaagggagacaacaaaaagtttgagatttggtgcaattccaga
gaagaggttttcattgtccaggccccaacaccggagatcaagacggcatgggtgaacgag
atccgtaaggttcttactcagcagctcaaagcttgcagagacgcccgtcagcagaagagc
tcagactctgtgtccccgagtaccaccagcagcagctccatctgcctcagcccgttccgc
agcaacgcacagaaaaaccagaagaaacaggaggaaaagaaggcggagccaagcccgatc
tcagacaccaacgcatgctcctccccaaagcacaaagatgaagcggtgaccagcccgacc
acggacaggtcctctttggctaaaaagcgtttcactttgcagggtttcagcaatctcaag
agtccgaaagctctgagtcctgagcaaacagccaaacgccactcggtcaagagtgacccc
actccgtttggctttagaggttggagcaaggcgtctctgtcggtggacgcctctgaggag
aacgatggctactccagcggtgaggaccccatgaactctgacactgaagaggatggagtc
aagaagctggctccaggaaagtacacggtggtagcagactgcgagaaggcgggccctcag
gagctttctgttaaaagtggagacatggtccagctcatcagggaaggagaggagggacaa
tggtttgtgaaaaacctccgcacccacaaggagggctgggtggcagcagccaacctcctc
agcctcatctcagagtccaagagctcccaatcactgagcagctcagatggcagcgtctct
gggaacctcagcacgtcttccagctgcagtgagacctacaccagcttctctgacatcaaa
ccctga
DBGET
integrated database retrieval system
