Oryzias melastigma (Indian medaka): 112160072
Help
Entry
112160072 CDS
T07439
Name
(RefSeq) ankyrin repeat and IBR domain-containing protein 1
KO
K11967
ankyrin repeat and IBR domain-containing protein 1 [EC:
2.3.2.31
]
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oml04121
]
112160072
Enzymes [BR:
oml01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
112160072
Ubiquitin system [BR:
oml04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
112160072
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IBR
Ariadne
IBR_1
IBR_2
Ank_2
UBA_ARI1
Ank_5
Ank
zf-RING_2
Ank_4
zf-RING_UBOX
Ank_3
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
112160072
NCBI-ProteinID:
XP_024150192
Ensembl:
ENSOMEG00000011610
UniProt:
A0A3B3DEJ6
LinkDB
All DBs
Position
LG11:16071825..16088549
Genome browser
AA seq
1278 aa
AA seq
DB search
MGNTATKFRKSLLSGDEALAWQLYEGNPQFRDSLDPNASYGEQYQHNTAMHYVCRHAMTR
LLRSFLFSKEGNPNKRNVHNETCLHVLCQGPQILLLPEGALSPRLARPQRDEQRRADSLQ
MILSWTGARLEAGMYEKANVNATDNHHSTCLHYAAAAGMKSCVELLIQNDADLFVEDEDK
LTPCDHAERHHHTELALSLESQMVFSSASSQQSNGDAHGEASLLQYKEPFEGLKLQDLRR
LKDMLIVETADMLQAPLFTAEALLRAHDWDREKLLEAWMSDAEGCCQRSGVAMPTPPPSG
YNAWDTLPSPRTPRTPRSPLTLTLTSPTDSCLTPGEEGMATCGICLCSISVFEDPVDMSC
GHEFCRSCWEGFLNVKIQEGDAHNIFCPAYECYQLVPVHVIESVVSREMDQRYLQFDIKA
FVENNPAIRWCPVARCERAVRLSRPGPGDSDPHSFPLLPSPAVDCGKGHLFCWECLGEAH
EPCDCQTWRNWLQKVTEMKPEELAGVSEAYEDAANCLWLLTNSKPCANCKSPIQKNEGCN
HMQCAKCKYDFCWICLEEWKKHSSSTGGYYRCTRYEVIQQLEEQSKEMTVEAEKKHKSFQ
ELDRFMHYYTRFKNHEHSYKLEQKLLKTAKEKMVQLSRAFISREGTPPDTRFIEDGVTEL
LKTRRVLKCSYPYGFFLQQGSTQKEIFELMQTDLEMVVEDLAQKVNRPYLRTPRHKIISA
ARLVQQKRQEFLASVARGVAPNESPDPPRRNFPGGSWDWEYLGFASPEMGSRRSVVGVGE
QRDRQSQGYADVQYRRRHRPWLRGEMLSLHSLRSSSNTPETSRRSDTTEGTERSEGRRRA
LGSLDEDDPNILLAIQLSLQESRREQGLEGGVGLEERRVASAGDLVDSLPSEGPPGARGS
SFPSSLLNRACLPPCRTDATSQPSVSSSLPLPPPPPSLSAELLELGDSLMKLGSVTQEQL
GALTAPHSSEPAYGSCSHRPDQNALSTPYVLDHIAITDPRYDSKDHSHSYSSAYLPEAAS
SALERSGQSREHAGTYDGSPKSERSYQPCPERGSSYTAEHPATYALKQLPTSEPQPSVQL
CLPSPELEPELLLSPVIPPGGPFSPSDPQSLEPLDPAASAQLLDNIMAWFNNNINPQNNP
QSLALIPSPPTTETDSSPDTHTEADSQNPSDGSPAPIWQPLEGEPEAAPHSTVGPEDARR
FRSRSEDRENRIAGGRGSDPGCATDMSLGEARTHLSSHSHCGNSPAHTASAADGALEPVL
QLERSRPSEEWEEQEHLV
NT seq
3837 nt
NT seq
+upstream
nt +downstream
nt
atgggaaacacggccaccaagttccgcaagtctcttctcagtggcgacgaggccctggcc
tggcaactctacgagggcaatcctcagttcagggacagcctggacccgaacgcatcatac
ggagaacagtaccagcataacactgcgatgcactatgtatgccgccacgccatgacgcgg
ctgctcagatcattcctgttcagcaaagagggaaaccccaacaagcggaacgttcacaac
gagacgtgcctccatgttttgtgccaaggcccgcagatcctgctgctgccagagggagcg
ctgtcgccgcgcctcgcccggccgcagagggatgagcagcgccgcgccgacagccttcag
atgatcctgagctggaccggcgccaggctggaggcaggcatgtacgagaaagctaatgtc
aacgccaccgacaaccaccacagcacctgtctgcactacgctgctgctgcaggcatgaag
agctgtgtggagctgctgatccagaatgatgcagacctgtttgtcgaggatgaggataag
ctgacgccatgcgaccatgccgagcggcaccaccacaccgagcttgctctcagcttggag
tcgcagatggttttctcctccgcctcgtctcagcagtcaaacggagacgcacacggcgaa
gccagcctgctgcagtacaaggagcctttcgagggcctgaagcttcaggatttgcgccgg
ttgaaagacatgctgattgtggagacggcagacatgctgcaagccccccttttcactgcc
gaggcgctgctgcgagctcatgactgggacagggaaaagcttctggaagcttggatgtca
gacgctgagggatgttgccagcgctccggcgttgccatgccgaccccaccacccagcggc
tacaacgcgtgggacactctgccatctccccgcactccccggaccccacgctcgcctctc
acgctcacactgacgtcccccaccgacagctgcctcactcctggagaggagggcatggcc
acgtgtggaatctgcctctgctccatctccgtctttgaggaccctgtggacatgtcctgc
ggccacgagttctgcagatcctgctgggaagggttcctcaacgtcaagattcaggagggt
gacgctcacaatattttttgcccggcgtacgagtgctaccagctggtcccggtgcatgtg
atcgagagtgttgtttccagagagatggaccagcgatatctacagtttgacatcaaggcg
ttcgtggagaacaacccggccatccgctggtgtcctgtggctcgatgcgagcgggcggtc
cgcctatctcgaccaggtcctggtgacagtgaccctcacagcttccccttgttgccctcc
ccagctgtcgactgcggcaaaggtcacctcttctgctgggagtgtcttggcgaggcccac
gaaccatgtgattgtcagacttggaggaactggctccagaaagtcacagagatgaagcct
gaggagttggcaggtgtgagcgaggcttatgaggacgcggctaactgcctgtggctcttg
actaactctaaaccatgtgccaactgcaagtctcccattcagaagaatgagggctgcaac
catatgcagtgtgccaagtgcaaatatgacttctgctggatctgtctggaggagtggaag
aagcacagctcgtccaccggaggctactaccgctgcactcgctacgaggtcattcagcag
ttagaggagcagtccaaagagatgactgttgaggcggaaaagaagcacaaaagctttcag
gagctggaccgttttatgcactactacactcgcttcaagaaccacgaacacagttataag
ttggagcagaagctgctaaaaacggctaaagagaagatggtgcagctcagcagagccttc
attagccgtgagggcacgcctcctgacacccgcttcatcgaggatggcgtgacagagctg
ctaaagacgcggcgcgtgctgaagtgctcttatccatatggcttcttcttgcagcaaggc
agcacccagaaagagatatttgagctcatgcagactgacttagaaatggtggtggaggat
ctggcccagaaggtcaaccgcccgtacctgcggaccccgcgccacaagattatcagcgcc
gcgcgcttggtgcagcagaagaggcaggagtttctggcgtcggtggctcgtggcgtcgct
cccaacgagtctcctgatcctccccgcaggaatttccctggtgggtcgtgggattgggag
taccttgggttcgcctctcctgagatgggaagccgccgctctgttgtgggagtaggagag
cagagagacaggcagtcgcagggctacgcagacgtccagtatcgccggagacaccggccg
tggctcagaggagaaatgctgagtctgcacagcctgaggagcagcagcaacacgccggag
accagcagaaggagcgacactacagagggcacagagaggagtgaaggtcgcagaagagcg
ctgggctccctggatgaagacgaccccaacatcctcctagccatacagctgtcgcttcag
gagtcccgcagggagcagggtctggagggtggggtgggtctggaggagaggagggtggcg
tctgcgggagatctagtggactcgctcccttcagaaggtcctcctggagccagaggctcg
tctttcccctcttccctcctgaatcgcgcttgcctccccccctgcaggacagacgccacc
tcccagccgtccgtgtccagctccctccctctcccgcctcctccgccatctctcagcgcc
gagctgctggagctgggagatagcctcatgaaactggggagcgtcacgcaggagcagctc
ggggcgctgaccgccccccactcctctgaacctgcttacggcagctgcagccatagacca
gaccagaatgcactgagtacaccgtatgtgctggatcacatcgccatcacggatccgcgt
tacgacagcaaagatcacagccactcatactcctctgcttatttacccgaggctgcttcc
agcgcgctggagcgctccggacaaagccgggaacacgcgggaacgtacgacggcagccca
aagtcggagcgttcctaccaaccctgtccggagcgcggcagctcctacaccgcggagcat
cccgccacatacgctctgaagcagctgcccacctcagaaccccaaccctccgtccagctg
tgcctcccctctccagagcttgaaccggagctgctgctgtccccagtcatcccccccggg
gggccgttcagccccagcgacccccagagtctggagcctttggacccggcggccagcgct
cagctactggacaacatcatggcctggttcaacaacaacatcaacccgcagaacaacccg
cagagcctggccctcatcccctccccacccaccaccgaaaccgactcctcccccgacacc
cacaccgaagccgacagccagaaccccagcgacgggagccccgcccccatctggcagccc
ctggagggcgagccggaggcggcgccacacagcactgtgggtccagaggacgcgagacgg
ttccggagcaggtcggaggaccgggaaaaccggattgcgggggggcggggatcagacccg
gggtgtgcgaccgacatgtcgctgggcgaagcgcgcacacacctgagctcccactcccac
tgtgggaacagccccgcccacactgcctcggccgctgacggagccttggagccagtgctg
cagctggagaggagccggccgtcagaggagtgggaggagcaggaacacttagtgtga
DBGET
integrated database retrieval system
