Oryzias melastigma (Indian medaka): 112160074
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Entry
112160074 CDS
T07439
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 2
KO
K05046
solute carrier family 6 (neurotransmitter transporter, GABA) member 13
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
112160074
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
oml02000
]
112160074
Transporters [BR:
oml02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
112160074
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GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
112160074
NCBI-ProteinID:
XP_024150193
Ensembl:
ENSOMEG00000006332
UniProt:
A0A3B3BJ51
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Position
LG2:complement(3325473..3342542)
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AA seq
625 aa
AA seq
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MVRGVCVSLPEPVMADKLASVDQPLKKFPAVGLPNGKEGDGLHARGQWASKAEFLLAVAG
QIIGLGNVWRFPYLCYKNGGGVFFVPYLLFLVLCGIPLFLLETSLGQYTSLGGVSAWRTI
CPIFGGLGYASQVMILHGCVYYIVILAWALFYLSYSFQAELPWSHCNNSWNTNSCVLFQH
LNQSANGSSPLENATSPVMEFWEREVLRLSDSLDELGPISWKLALCLAAVWLICYFCVWK
GVKSTGKVVYLTATFPYVMLFVLLVRGATLPGATQGIIYYLKPDVARLADPQVWMDAGTQ
IFFSYGICLGSLTALGSYNKYNNDCYKDSFLLCLLNSATSFLAGFAIFSVLGFMAEEQGV
DIASVAESGPGLAFIAYPRAVSMMPLPQLWAVCFFLMIIMLGLDTQFVSLEALMTSVTDL
YPHLIRRGRRRELLLLLVCIVCFLVGLVMVTPGGLYVFQIYDHFSCSGASLLLLSIFQSL
AIGWVYGAERFSSNIRDMTGYSPLPVFKLCWKYLTPAVCTATFIFSLVRWSPLSLGKGLV
APVWASTLGWLLTLSSVSLLPIWAIYALITTPGDLSQRFQRLCSPTKKSFHHLSPSSPAP
AYSPVLSLSEKPKEKMAALIQDQTT
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atggtcaggggtgtgtgcgtgtcgctaccggagccagtcatggccgacaaactggcttca
gtcgaccagccgctgaagaagttccctgctgtgggactccccaatggaaaggagggagac
ggcctccacgctagaggccagtgggccagcaaggccgagtttctcctggcggtggcgggg
cagatcatcggactgggcaacgtctggaggtttccatatctctgctacaaaaacggagga
ggtgtgttcttcgtaccctacctgctgttcctggtgctgtgtgggatccccctcttcctc
ttggagacctcactgggacagtacaccagcctcggaggggtcagtgcctggaggactatc
tgtccaatatttggaggtctgggttacgccagccaggtgatgatcctgcacggatgcgtg
tactacatcgtcatcctggcctgggcgctcttctacctgtcctacagcttccaggcggag
ctgccgtggtcgcactgcaacaactcctggaacacaaattcctgcgtgctcttccagcac
ctcaaccagagcgccaatggaagcagcccgctggagaacgccacctcccccgtcatggag
ttctgggagcgggaggtgctccgtctgtcggactcgctggatgagctgggtcccatcagc
tggaagctggctctctgcctggctgccgtctggctcatctgctacttctgtgtctggaag
ggagtgaagtccaccgggaaggtggtgtacctgaccgccaccttcccctacgtcatgctg
ttcgtgctgctggtgcgcggcgccaccctccccggagcgacccagggcatcatctactac
ctcaaacccgacgtcgcccgcctggcagacccacaggtatggatggatgcaggtacccag
atctttttctcttatggaatctgcttgggaagtctcacagctctgggcagttacaacaaa
tacaacaatgactgctataaggactccttcctgctgtgcctcctcaacagcgccaccagt
ttcctggcgggcttcgccatcttctcagtcctgggcttcatggctgaagaacagggcgtg
gacatcgcctccgtggccgagtcaggacccggtcttgccttcatcgcctaccccagagcg
gtgtccatgatgcccctcccccagctgtgggccgtctgcttcttcctcatgatcatcatg
ctggggctggacactcagtttgtgagtctagaggcgctgatgacgtcggtcacggacctg
tacccccacctgatccgccgggggcgccgcagagagctcctgctgctgctggtgtgcatc
gtctgcttcctggtggggctggtcatggtcacgccgggggggctctacgtgttccagatc
tacgaccacttctcctgcagcggagccagcctgctgctgctctccatcttccagtcgctg
gctatcggctgggtgtacggagccgagcgcttcagctccaacatcagagacatgacgggc
tacagcccgctgcctgttttcaagttgtgctggaagtatttgaccccggccgtgtgcact
gcgaccttcatcttctcgttggtgcgctggtctcctctgagcctcggcaaaggtctggtc
gctccggtctgggcctccacgctgggctggctcctcaccctctcctccgtctccctcctc
cccatctgggccatctacgctctgatcaccacgccgggagacctgtcgcagcgtttccag
cgtctctgcagccccaccaagaagtccttccaccacctttcccccagcagcccggcgccg
gcctacagccccgtgctgtccctcagcgagaagccgaaggagaagatggcagcactcatc
caggaccagaccacatga
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