KEGG   Oryzias melastigma (Indian medaka): 112160115
Entry
112160115         CDS       T07439                                 
Symbol
pspc1
Name
(RefSeq) paraspeckle component 1
  KO
K24993  paraspeckle component 1
Organism
oml  Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:oml00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:oml03041]
    112160115 (pspc1)
Spliceosome [BR:oml03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   Other SAPs
    112160115 (pspc1)
SSDB
Motif
Pfam: RRM_1 NOPS RRM_7 RRM_5 RRM_8
Other DBs
NCBI-GeneID: 112160115
NCBI-ProteinID: XP_024150257
LinkDB
Position
LG2:8398045..8405665
AA seq 506 aa
MANRNMPQGRMLAMNSPQSARRGTDSPVAEQRPASKHSPAPPPQQHSPAAEPAEEAAAED
GDESHSEMTFDITSFRKPGEKSFTQRSRLFVGSLPQDISEEEFKNMFAKYGNIGEVFINR
ERGFGFIRLETRTLAEIAKAELDGTVLSNRQVKIRFATHGAALTVRNLLPTVTNELLEQA
FSQFGPVERAIVVTDDRGRPTGKGIVEFGNKVAARKALERCSEGALLLTTTPCPVIVEPL
EHLDDEDGLPEKLLQKTPKYHKERGQPPRFAQPGTFEFEYSSRWKALDEMEKQQREQVDR
NIKEAKEKLEAELESARHEHQLMLMRQDLMRRQEELRRLEELRNQELQRRKQIEMRHEEE
RRRREEEMMRHREQEGFKPNYIENREQEMRVGELGPRGAVNVGDGYNQASSGSASNQTQM
MGVSGRGAAIGAEGASNMGAPMMSENGAMRNERYAQGGVAAGRPEVESPKQHQQPLGSQV
GPPAGFGRGGPATGLFDGPNSKRRRY
NT seq 1521 nt   +upstreamnt  +downstreamnt
atggccaaccgaaacatgcctcaaggacgcatgctcgccatgaactctccccagtcggcg
agacgcgggacggactccccggtggcggagcagaggccggcaagcaaacacagtccagcg
cctccgcctcagcagcactcgcccgcggcggagccggcagaagaagcggccgcggaggac
ggcgacgaaagccattcagaaatgacatttgacatcacgagcttcaggaagccgggggag
aaaagtttcacccagcgctctcgtctgtttgtgggcagcctgccgcaggatatttcggag
gaggagttcaaaaacatgtttgcaaaatacgggaacattggcgaggtgttcatcaacaga
gagcgaggctttgggttcattcgtctggaaacccgcacgttagcagagatcgccaaagct
gagttggacggcacagttttaagtaatcgacaggtcaagatccgcttcgctacgcacggc
gctgcgctcaccgttcgcaatctgctgccgacagtgaccaatgaactgctggagcaggcc
ttttctcagttcggtccagtcgagcgggccatcgtcgtgacggacgaccgcggccgtccc
accgggaaagggattgtggaatttgggaacaaggtggcggctcggaaggctctggagcgc
tgcagcgagggagctttgctgctgaccacaactccgtgtcccgtcatcgtcgagcctctg
gagcacctggacgacgaagatgggctgccagaaaaactactgcagaaaactccaaagtac
cacaaggagcgagggcagccgccgcgcttcgcccagccaggcaccttcgagttcgagtac
tcgtcccgctggaaagctctggacgagatggagaagcagcaacgggagcaggtggacaga
aacattaaagaggccaaagagaagctggaggcggagctggaatcagccagacatgaacac
cagctcatgttgatgcgacaggatctaatgaggcgtcaggaggagctgaggaggctggag
gagctccggaatcaggagttacagagaaggaagcagatcgagatgaggcacgaggaggag
aggaggaggagagaggaggagatgatgaggcacagggagcaggagggattcaagccaaac
tacatcgaaaacagggaacaggaaatgagagtgggggagctgggccctcgtggagccgta
aatgtaggagatggctataaccaggcctcctcgggctccgcctctaaccagactcagatg
atgggcgtgagtggaaggggagccgccattggtgcagagggggcgtcgaacatgggcgca
ccgatgatgtcggagaatggagccatgcggaacgagcgctacgctcaggggggagtggct
gcaggccgaccggaggtggagtctccgaagcagcaccagcagcctctgggctctcaggtc
ggaccgccggctgggtttgggaggggcggtcccgccacaggcctctttgacggccccaac
agcaaacggcgcagatactga

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