Oryzias melastigma (Indian medaka): 112160122
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Entry
112160122 CDS
T07439
Symbol
atxn1a
Name
(RefSeq) ataxin-1a
KO
K23616
ataxin 1/1L
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
112160122 (atxn1a)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ATXN-1_C
AXH
Motif
Other DBs
NCBI-GeneID:
112160122
NCBI-ProteinID:
XP_024150269
Ensembl:
ENSOMEG00000012883
UniProt:
A0A3B3C0W6
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Position
LG11:complement(15399000..15485412)
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AA seq
794 aa
AA seq
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MYRDKKTRSETNMKSNQERSNECLPPKKREIPSCTLPSENRSPVPPPSDSQRTENMTWLA
SVAGGNEGSLGEHRSFNQSDGALYKSPSLTHSSPCSSSLRLVSSLPTVYTSPITQATVGG
TVHYTQLPPNLQLIASPYPTPYAGYIPQQLLPPPPPPLPSSSSAAQRAAYAETTVSKQDQ
HRTSSGRTSMPPPSTDSIPHNVQISTSPRTLASSHLSAQSVHPHHSMGHGMSHVVVKYTD
GPSRKEEGASRSREFHNGDVERGQRPRLSPESSLFKSGSKPREPTSCLSSYEARQLVLSP
DYTHESLGPRTSVMLMPNSHEDHQLLPTRANLEKQTASAPTHQEKGGIVMGKPLNRTPSS
STTCSFTFPPPPSVDNLKAGVSSLSPQTVIQTTHNATESLSMGLPSTSIYPQPPIIGYIA
GGNGGGYHTNLQQHLLIPGSQPVIIPVSGVPTLEPVTSHITSSTQAAPFPSTLPHTYIAA
TSIKGESSESGSFHEAASGAVVQAQIHLPMVPAPSGLVALSPPSSTAASSSLPPYFIKGS
IIQLADGELKRVEDLRTEDFIQSAEISSELKIDSSTVERIEGSQTSANFAVVQFSVGEHR
SQVSVEVLLEYPFFVFGQGWSSCCPDRTTQLLELPCSKLSVGDVCISLTLKNLKNGSLKK
TLEPASHASVQHLKPHRAASDAPQSCSGGNSRHRERENGISQRRSDERGSGESSRMENGD
VMVEGRRSVFKGQVAGSAAVGCSKPAPSRKRRWSAPEGRDIEKSEEEPPLTLPKPSFIPH
EVKVSIEGRSNIGK
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgtacagagacaagaagacaagaagtgaaaccaacatgaagtccaaccaggagcgcagt
aatgaatgtttacccccaaagaagagggaaatcccatcatgcacgttgccttctgaaaac
cgctcacctgtgccaccccccagtgacagccagcgcacggagaacatgacctggctagcc
agtgtggctggtggaaatgaaggcagcctgggtgagcatcgtagctttaaccagtcggat
ggggccttgtacaaatccccatccttgacccactcttccccctgttcatcctcgctgagg
ctggtgtcctcacttcctaccgtgtacacgtcccccataacacaggccacggttggaggg
acagtccactacacccaacttccccccaacctgcagttaatagcctcaccctaccctact
ccctacgcaggctacatcccccaacagctactcccaccgcctcctccacccctcccctcc
tcttcatcagccgcacagagagccgcttacgcggaaacaactgtctccaagcaggaccag
catcgaacgtcatcgggacgcacctccatgcctcctccttccacagactccatcccacac
aacgttcaaatttcaacgtcccctcggactctagcgtcgtctcacctgtcggcccagtct
gtgcacccccaccattctatgggacatggtatgtcccacgttgtggtgaaatatacagac
ggtccctcaagaaaagaggaaggtgcctccagatctagagagttccacaacggggatgtg
gaaagagggcagaggcctagactgtccccagagtcgagcctctttaagtcagggagcaaa
ccaagggaacccacgtcctgtttgtcttcttatgaggcccgtcagctagttctatcacca
gactatactcatgaatctttagggccaagaacctcggtcatgctaatgcccaacagccat
gaggaccaccagcttttaccaaccagagccaacctagagaagcaaacagcctccgccccc
acacatcaagagaaaggtggcattgtcatgggcaagccgctcaaccggaccccatcctcg
tccaccacctgctctttcacctttcctcccccaccaagtgtagacaatctgaaagctggt
gtcagctcgctgtctcctcagactgttatccagactacccacaatgccacagagtcactg
tcaatggggctgccctccacaagcatctacccacaaccacccattattggttacatcgca
gggggcaatggaggcggttaccacaccaacttacagcaacacttactcattccaggcagc
caaccagtcatcatccctgtcagtggagtcccgacattagaacctgtgacctcccacatt
acgtcctccacacaagctgcacctttccctagtacactcccacatacgtacatcgctgcc
acctccatcaaaggggaatcctcagaaagcggctcgttccatgaagctgcttcaggtgct
gttgttcaagcccaaattcatctccccatggttcctgctccatctgggctggttgctctt
tctcctccgtccagtacagcggcgtcctcttcactacccccgtacttcatcaagggctcg
atcatccagctggctgacggtgagctgaagcgtgtcgaggacctaaggacggaagacttc
atccagagcgcagagatcagcagtgagctgaaaatcgactcgtccacggtggagcgcatc
gaagggagccaaacctcagcaaactttgccgtcgttcagttctccgtaggcgaacatcgt
tcacaggtaagcgtggaggtcttgttggagtaccccttctttgtttttggccagggctgg
tcgtcatgctgccccgaccggaccacccagctcctcgagctgccttgttccaagctctct
gtcggcgacgtttgtatttcgctcactctcaagaacttaaagaatggctccctgaagaag
acgctggagccggccagccatgcttcagtccaacacctgaaaccccacagagccgcctca
gacgcaccgcagagctgcagtggaggaaactccaggcaccgggagcgggagaacggcatc
agccagcggaggagtgacgaaagagggagcggggaaagctccagaatggaaaacggagat
gtcatggtggagggaaggaggtctgttttcaaaggtcaggttgccggcagcgcagcggtt
ggttgcagcaaaccggcgccgagcaggaagcgaaggtggtctgctccggagggtcgagac
atagaaaaatctgaggaagagccgcccttaactctgcccaaaccttccttcattccccat
gaggtgaaagtcagcattgagggaaggtctaacatcggcaagtaa
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