Oryzias melastigma (Indian medaka): 112160124
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Entry
112160124 CDS
T07439
Symbol
slitrk6
Name
(RefSeq) SLIT and NTRK-like protein 6
KO
K25837
SLIT and NTRK-like protein 6
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04514
Cell adhesion molecules
oml04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
112160124 (slitrk6)
04517 IgSF CAM signaling
112160124 (slitrk6)
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_1
LRR_LRWD1
LRR_14
LRR_9
LapA_dom
SIT
FtsL
Motif
Other DBs
NCBI-GeneID:
112160124
NCBI-ProteinID:
XP_024150267
Ensembl:
ENSOMEG00000005133
UniProt:
A0A3B3BG62
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Position
LG2:6035477..6057681
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AA seq
844 aa
AA seq
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MQGCIIFISLFLTAARSQDIHPSQASSSISESCDSLCSCEAKDGILHLNCEQRNISKISQ
IKIPPGIPFHLNLYKNDLVELRTEEMEGLKGALSLHVGGNSIQELEPGVFGALGTLKKLH
INSNFLVTLKEDTFQGLVNLEFLQADTNFIQVIEPGAFNKLIRLKVLILNDNSIEFLPNN
IFRFVPLTHLDLRGNKLQTLPYVGFLEHIGRIMELLLEDNSWICDCDILHLKIWMENMRS
QSAIGDVVCSAPQNLKGSILAKVKRDVLCPSHADINLEEPSKSLDMVVTPSSKVFQIPKL
NNAKDDARFPTPSHAPGSPCASHCACHNHPVSGFLMHCQDGGIQKVSDIGITQRSPTKLI
LTGNMIQKLLKYDFVTYDSLETLNLSNNRIDYIDNETFLSLSSLKKLFLNGNKLEKLFST
MFVGLHNLENLYLEYNLIKEIAPGTFNPLPNLKLLSLNNNQLSSLPAQIFRNVPLAKLNL
RKNLLMHLPVSNVLDQLDSLEQIYLEDNPWDCSCDLLSLKQWVEKLRKDTVVGSILCHTP
KKVMESELRSLHHEALCPGLGTYHPVPPSDEESVTATLGPDGSSRGLFISLTDTIPLSVL
ILSLLIFVLMIIFCSAGLVVFMVHRRRRRAKKKAAEEQPNPNTTSSSPIHLHYSMYGQKT
THHTLTQRTGSATLYEDRSHSPIVQICRNPTYCSQHKEHDNLDYDESGPKHHICRSIMER
ENTSPLTGNPCSKFRPMGGECPAEFMTLGNPNSLYRNILDRGEKELQQLGITEYFRKNMP
QLQPSMDMQGPGHQEELKLMEAIMYTRPRKVMLEQTKNEYFELKANLHTEPDYLEVLEHQ
TAFN
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atgcagggctgtatcattttcatcagcttgttcttaacggcggcccgatcccaagatatc
catccctcacaggcttcatcctccattagcgagtcttgtgactccctgtgctcatgtgag
gcgaaagacggcatccttcatcttaactgcgagcagaggaacatcagcaaaatctcccaa
atcaaaatcccgccaggcatccccttccacctgaacctttataaaaatgacctggtcgag
cttaggactgaggaaatggaagggcttaagggtgccctttccctgcatgtggggggtaat
agcatacaagagctggagccaggggtcttcggcgctctggggacgctgaaaaagctccac
ataaacagcaatttcctcgtcactctgaaagaagacactttccaaggcttggtgaatctg
gagttcctccaggctgacacaaacttcattcaggtcattgaaccgggggccttcaacaaa
ctgatccgcctcaaagtcctgatcctcaacgacaactccattgagttcttacccaacaac
attttccgcttcgtgcccctcacacacctggacctgcgaggcaacaagctgcagacgctg
ccgtacgtgggtttcctggagcacattggccggattatggagctgctcctggaggacaac
agctggatctgcgactgtgatattctgcatttaaaaatctggatggaaaacatgagatcc
cagtccgccatcggggatgtggtttgcagcgctccgcaaaacttgaaggggagtatcctc
gctaaagtcaagcgggacgttttgtgtccttcgcacgcggatatcaacctagaggagccc
tcgaagtcgctggatatggttgtgactccttcatccaaagtgtttcagattcccaaactg
aacaatgccaaagatgatgccaggttcccaacgccatcccacgctccaggcagtccctgt
gcaagtcactgcgcctgtcacaaccaccctgtgtctggctttttgatgcactgtcaggac
ggagggatccaaaaggtctcagatattggaattactcagcgcagtcctaccaaactgatc
ttgacaggaaatatgattcagaaactcttgaaatatgattttgtcacatatgacagtttg
gagaccctcaacttatccaacaacagaatcgattacattgataacgagactttcctcagc
ttgagcagcctgaaaaagctgtttttgaacggaaataagctagaaaagctgttctccact
atgtttgtgggactccacaacctcgagaatctttatctggaatacaacctcatcaaagag
attgctcctgggacttttaatcccctgccaaacctgaaactcttgtctttaaataataac
cagctcagttctcttcctgcgcagatatttcgcaacgtgccccttgccaaattaaacctg
agaaaaaacctgctcatgcatctgccagtgagcaacgtgctcgatcaactcgactcactg
gagcagatttatttagaggacaacccctgggactgcagctgtgacttgctcagccttaaa
caatgggtggagaagctgcggaaagacacagtggtgggctcaattttgtgtcacacccca
aagaaggtgatggagagcgagcttagaagtcttcatcacgaggcgctttgtcccgggttg
gggacctaccaccctgtgcctcccagcgacgaggagagcgtaacagccactttggggcct
gacgggagcagcaggggtttgttcatttccctcacagacaccatcccgctttctgtgctc
atcctgagcctcctcatcttcgtcctcatgatcatattctgctcagccgggctggtggtg
ttcatggtgcaccgacggcggcgcagggcgaagaagaaggcagcagaggagcagcctaac
cccaacaccaccagcagttcccccatccatctgcattacagcatgtatggacagaaaacc
actcaccacaccctgactcagagaaccgggtcggccactctgtacgaagacagatcgcat
agccctattgtgcagatctgccgcaaccccacctactgctcccaacacaaggagcacgac
aatttggattacgacgaatccggcccaaagcatcacatctgcaggagcatcatggagagg
gagaacacgtctccgctgacgggaaacccctgctccaagttcaggcccatgggtggagag
tgcccggccgagttcatgactctcgggaatcccaactccttgtacaggaacattctggac
aggggggagaaggagctccagcagctgggaattactgaatacttcaggaaaaacatgccc
cagctccagccctccatggacatgcagggcccggggcaccaggaggagctgaagctaatg
gaggccatcatgtacacaagaccgcgcaaggtcatgctggagcaaactaagaacgagtac
tttgagctgaaggccaacctgcacaccgagccggactacttagaagttctggagcatcag
actgcatttaactga
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integrated database retrieval system