KEGG   Oryzias melastigma (Indian medaka): 112160141
Entry
112160141         CDS       T07439                                 
Symbol
zranb3
Name
(RefSeq) DNA annealing helicase and endonuclease ZRANB3 isoform X1
  KO
K25861  DNA annealing helicase and endonuclease ZRANB3 [EC:5.6.2.- 3.1.-.-]
Organism
oml  Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:oml00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:oml03032]
    112160141 (zranb3)
   03400 DNA repair and recombination proteins [BR:oml03400]
    112160141 (zranb3)
DNA replication proteins [BR:oml03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    112160141 (zranb3)
DNA repair and recombination proteins [BR:oml03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   Nucleases
    112160141 (zranb3)
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C HNH ResIII Zn_ribbon_RanBP HNH_5 DEAD Flavi_DEAD
Other DBs
NCBI-GeneID: 112160141
NCBI-ProteinID: XP_024150286
Ensembl: ENSOMEG00000000999
LinkDB
Position
LG2:complement(8055899..8218152)
AA seq 1108 aa
MFYPSDPPVKPEEHSPVEMADDGGPSSCWAGRWSQQLSGLPNKLLQRLMPFQREGVEFAL
SLNGRCMIADEMGLGKTVQAIAVAYAYRQEWPLLVVVPSSLKYPWIEELERWIPELQPGD
INLVENKSHTVGIGSTKVTVLGYGLLTTDARPLVEALTRQRFSVVVVDESHYLKSRNAAR
TKILVPLIQSAKRAILLTGTPALGRPEELFMQIDALYPRRFGTWTDYAKTYCNAHYRYFG
PRRQWDCRGASNLEELHRRLSQIMIRRLKADVLTQLPPKIRQRIPFDLPKEAAKEAAASF
AEWERLMKGLGSGVADNPFTEVMSLVTQMYKQTAIAKAGAVKDYIKMMLEAEQLKFLVFG
HHLTMLQACTEAAIEAKAGYIRIDGSVPASERNQLVHKFQSDPETRVAILSIQAAGQGLT
FTAASHVVFAELYWNPGHIKQAEDRAHRIGQTSSVNVHYLIAKGTFDTVMWSMLNRKETV
TGSTLNGRKEYLKADEGDKDKWEFLNFADSWKPTEMVLPLEGNSGKTNDDIFFSHFEKEK
QHDIRSFFSPSANKDKKRRRGEDGGETSSISSEVNSENEDRNSSPSDLDFSPQLKRLRTP
RPRPSPLSRFGGKQAALRSPGVSVMTPRKLAQPEVVSTWNCGACTYSNSSLLPYCEMCEF
PRSASTLKTDPQGPGPDRPPPSSGREEVKQQEEGSPKDKQKVGEAEEEDELRLKGKQSSG
ERVDGGGRLPPDHTHDCRAVACLFSASDANGDDEGRGGDDASTTQPVYPGLQFCASQYTD
RIYLYSKDGAPLSLSFIPLDIKLTNWDDLPEAFNRHRENRIQVLRFVQEWSGLPAMKQKL
LRRSGLLFHSPSLGLQELTAAQRPHSSTKRYLSRDEVALASLSKAQQEGGGVRLVTKENF
FTRRKPACRRTAESSNDEQPSSSTDQQPPTEAGYLQATDSHGVPLCLSCQQACPTTGGPW
DTRFCSLNCEKEFLLRSSQTYMRSQVLEAEQGVCQHCGLHAHDLFLKIRDAPPSQRKEML
ENTWLAQLPLKQLNEMIRAPVEGDFWQVDHIRPVYSGGGQCSLDNLQTLCTVCHKSRTAQ
QAKERSRMRKSTAASRVASDITQFFFKK
NT seq 3327 nt   +upstreamnt  +downstreamnt
atgttttacccgtccgacccgcccgtgaagccggaggagcactctccagtggagatggcg
gatgatggcggaccgagctcctgctgggctggaagatggtcacagcaactgtcaggactt
cctaacaagctcctgcagcgtctgatgcccttccaaagagagggtgtggagttcgccttg
tctctgaacggacgatgtatgattgccgatgagatgggtctcgggaagacggtgcaggcc
atcgcggtggcatatgcctacaggcaggagtggcctctgctggtggtggtgccatcctcc
ctcaagtacccctggatcgaggagctggagaggtggatcccggagctgcagcccggagac
atcaatttggtggagaacaagagccacaccgtgggtattggcagcactaaggtgacagtt
ctgggttatggactgctcactacagacgcacgccccctagtggaggctctcaccagacaa
cgcttctccgtggtggtggtggacgagtcgcactacctcaaatcccgaaacgcagctcga
actaaaatcctggttcctctgattcagagtgcaaaacgagccatcctgttgaccggaact
ccagcactgggccgacccgaagagctttttatgcagattgacgcgctctatcccaggagg
tttgggacctggacggactacgccaaaacatactgcaacgcccattacaggtactttggg
cctcgcaggcagtgggactgccgcggggcgtccaacctggaggagctgcaccggcggctg
agtcagattatgatcagacggctcaaagccgacgtcctcacccagctgccccccaaaatc
cgccagcgcatccctttcgacctgcctaaggaggcggcaaaggaagcggcggccagcttt
gccgagtgggagaggctgatgaagggtctggggtcgggggtcgcagacaaccccttcaca
gaggtcatgagcctggtgactcagatgtacaagcaaaccgccatcgccaaggcgggagct
gtgaaggactacattaagatgatgctggaggcggagcagctgaagttcctggtgttcggg
caccaccttaccatgcttcaagcctgtaccgaagctgccatcgaggccaaggctggttac
attcgaatcgacggcagcgttccagcgtctgaacgaaaccagttggtccataaattccag
agtgatccagaaacccgtgtggccattctaagcatccaagcagctggacagggtttgacc
ttcaccgccgccagccatgtggtgtttgccgagctctactggaaccccggtcacatcaag
caggcggaggatcgcgcccatcgcatcgggcagacgtcctccgtcaacgtgcactacctg
atcgccaagggcaccttcgacaccgtcatgtggtccatgctcaacaggaaggaaactgtg
actggcagcactctgaacgggaggaaggaatacctgaaggccgacgagggggacaaagac
aagtgggaattcctcaactttgctgactcgtggaagccgacggagatggtgctgccgctg
gagggaaactccggaaaaaccaatgatgacattttctttagtcattttgagaaagagaag
cagcacgacattcgttcctttttctccccgagcgccaacaaggataagaagaggaggaga
ggggaggacggaggagagacgtcttccatctcctccgaggtgaacagtgagaatgaggac
agaaactcttcgccctccgacctagacttttccccgcagttgaaacggctgcgaacgccc
cggcccagaccgagtcctctatcgcggtttggggggaagcaggcggcattaaggagtccc
ggggtctcggtcatgaccccgcggaagctggcacaacctgaagtggtgtcgacgtggaac
tgtggggcctgcacctactccaacagcagcctgctgccttattgtgagatgtgcgagttc
ccgcgctcggcctcgactctcaaaacagatccgcaaggtccaggcccggaccgcccgccg
cccagctccggccgggaggaagtcaaacagcaggaggagggatctcccaaagacaaacag
aaagtaggagaagctgaggaagaggacgagctgaggctcaaaggcaaacagtcatccgga
gagagagttgacggtggcgggcgcctcccccctgaccacacacacgactgcagagctgtg
gcgtgtttgttttctgcttctgatgctaatggcgatgatgagggcaggggtggagatgac
gccagcaccacccagcccgtctacccaggccttcagttctgcgccagccagtacacagac
cgaatatatctatactctaaggacggagcgccgctgagcttgagcttcatccctctggac
atcaaactaaccaactgggacgacctgccggaggccttcaaccggcaccgggaaaatcga
atccaggtgctgaggtttgttcaggagtggagtggccttccagccatgaagcagaagctg
cttcgacgcagcggcctcctcttccacagccccagcctgggcctgcaggagctgaccgcc
gcacagcgcccccactccagcaccaagaggtacctcagcagggatgaggtggctctggcc
tccctgagcaaagcccagcaggaaggaggcggcgtccggctggtcaccaaggagaacttc
ttcaccaggaggaagcctgcgtgtcggcgaacagcggagagctcaaatgacgagcagcca
agttcatcgacggaccagcagccaccaacagaggccggatacctgcaggccacggatagt
cacggcgtcccgttgtgtctgtcgtgccagcaggcctgccccaccaccggggggccctgg
gacactcgcttttgcagcttaaattgtgaaaaggagttcttgttgcgctccagccaaacg
tacatgcggtcgcaggtcctggaggcggagcaaggagtctgtcaacattgcggcctccac
gcccacgatctgttcctgaagatccgggacgctcctccctcccagagaaaggagatgttg
gaaaacacctggctggcccagctgcccctcaaacagctgaacgagatgatccgcgctccg
gtggagggggatttctggcaggttgaccacatccggccggtgtacagcggaggaggacag
tgctccctggataacctgcaaacgctctgcacggtctgccacaaatctcggacggcgcag
caagccaaagagcgcagccggatgaggaagagcactgctgcgtccagggttgcgtcagac
atcacccagttcttcttcaagaaatga

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