Oryzias melastigma (Indian medaka): 112160246
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Entry
112160246 CDS
T07439
Name
(RefSeq) sodium/potassium/calcium exchanger 1 isoform X1
KO
K13749
solute carrier family 24 (sodium/potassium/calcium exchanger), member 1
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
112160246
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
oml02000
]
112160246
Transporters [BR:
oml02000
]
Solute carrier family (SLC)
SLC24: Na+/(Ca2+-K+) exchanger
112160246
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Na_Ca_ex
PRIMA1
PPP4R2
Motif
Other DBs
NCBI-GeneID:
112160246
NCBI-ProteinID:
XP_024150421
Ensembl:
ENSOMEG00000023620
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All DBs
Position
LG23:complement(1523497..1566918)
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AA seq
765 aa
AA seq
DB search
MRRLRRSRVLFFISGVLLCFVYTLTLKAKLSQLPASAGAEGGHDEVLEVRVRELLGPNET
EAAAPGSTQPPLLVVVNRTDIEQCVYVDPLPPKPPPTPPPLTTSPPAHPPGLPPHRKGDY
PEDLFTIEQRRQGWVLLHVLGMIYMFVALAIVCDEFFVPALEVITVKLEISDDVAGATFM
AAGGSAPELFTSLIGVFISHSNVGIGTIVGSAVFNILFVIGMCAIFSREMLHLTWWPLFR
DVTFYILDLIMLIIFFLDNVILWWESILLVLGYMSYVSFMKFNSQIEQMFKGQLNKHMSI
VKVWTAEEPEKESEAAPLPAPPPPPAPPAAAAPPKAEEKPKAEGERPPSSAHCNSLQADP
QQDKTRLRVRPVLQRGGSSASLHNTSLRNTIFQLMIHTLDPLGEEAALRGAVKSTPLKKV
RGEASFNGDVRGGKPVQRKAKNKVKPLDVPPTEKLQNKFAQNHSEVLFPSDGDQRAKSEQ
PDADGPPGGEPSSSQPAKTEEQKKTTDNAEESKASAASEGGLEGSDGSSEDESGNEESSD
PSESDEDEEKAPEENEEEEKEPLSLEWPDTPRKQATYLFLLPIILPLWFTLPDVRNVTSR
RFFVITFLGSIFWIGIFSYMMVWWAHQVGETIGISEEIMGLTILAAGTSIPDLITSVIVA
RKGLGDMAVSSSVGSNIFDITMGLPIPWLLYTLLHNGDPVVVSSNGLFCAIVLLFLMLLF
VIISIAACRWKMSKMLGLTMFVLYFVFLVLSVLLEDRILTCPISI
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atgaggaggctccggcgcagtcgcgtcctcttcttcatctcaggtgtgctgctgtgcttc
gtctacactctgactctgaaggccaagctgtctcagctgcccgcctctgcgggggcggag
ggggggcatgacgaggtcctggaggtcagggtccgagagctgctggggcccaacgagacg
gaggccgcagcgccggggagcacccagccgcctctgctggtcgttgtcaacaggaccgac
attgaacagtgtgtctatgttgaccctctgccacctaaacctccccccacccctccacca
ctcaccacaagccctcctgcccacccccctgggctgccccctcacagaaagggagactac
cccgaggacctcttcacaatagagcagcgcagacagggctgggtgctcctgcacgtctta
ggcatgatctacatgtttgtggctctggccatcgtctgtgacgagttcttcgtcccggcg
ctggaagtcatcaccgtcaagctggagatctctgatgacgtggctggagccaccttcatg
gcagctggaggctcagccccagagctcttcacctccctgattggtgtcttcatctcccat
agcaacgtgggcattggcactattgtgggctctgccgtgttcaacatcctgtttgtgatc
ggcatgtgcgccatcttctctcgggagatgctgcacctcacctggtggcctctcttcaga
gatgtgaccttctacatcctggacctcatcatgcttatcatcttcttcctggacaacgtc
atcctctggtgggagagtatcttgctggtgctgggctacatgtcctatgtgagcttcatg
aagttcaactcccaaatcgagcagatgttcaaaggtcagctgaacaagcacatgagcatc
gtcaaggtgtggaccgccgaggagccggagaaggagagcgaagcagcccctcttcctgct
cctccacctcctcctgctcctcctgctgctgctgcacctccaaaagctgaggagaaaccc
aaagcagaaggcgagcggccccccagcagtgctcactgcaacagcctgcaggcagaccct
caacaggacaagacaaggctgagggtgcgtcctgtcctgcagagaggcggcagctcggct
tccctccacaacacttcactgaggaacaccatcttccagctgatgatccacactctggac
cctctgggagaagaagcagcacttagaggcgccgttaagtccacgccactgaagaaggtc
agaggagaagcctcctttaatggtgatgtcagaggggggaagcccgtgcaaaggaaagca
aagaacaaagtaaaacctctggatgttccaccaacagaaaaactacagaacaagtttgct
cagaaccactctgaagtcctttttccttcagatggagatcaaagagcaaagagtgagcag
ccagacgccgatggaccaccagggggcgagccatcgtcctcacagcctgccaagactgag
gagcagaagaagactacggacaatgcagaggagtcaaaagcgtcagctgcttcagagggg
gggttggagggctctgacggcagcagcgaggacgagagtgggaacgaggagagcagtgac
cccagcgagagcgatgaggatgaagagaaggccccagaggagaatgaggaagaggagaag
gagccgctctctctggagtggcccgacactcctcggaagcaggccacctacctgtttctg
ctgcccatcattctgccgctgtggttcacgttgcctgacgtccgcaacgtgacgtccagg
aggttctttgtcatcacatttcttggttccattttctggattggcatcttctcctacatg
atggtgtggtgggctcatcaggttggagagactatcgggatctcagaggagatcatgggc
ctaaccatccttgcagctgggacctccatccctgacctgatcaccagtgtgattgtggcc
cgtaaaggtctgggagacatggccgtgtccagctcagtgggcagcaacatcttcgacatc
actatgggtctgccaattccgtggctcctctacaccctcctgcacaacggcgaccccgtg
gtggtcagctcaaacggcctcttctgcgccatcgtgctgctcttcctcatgctcctcttc
gtcatcatttccattgctgcctgtcgctggaagatgagcaaaatgctggggctcaccatg
ttcgttctgtactttgtgttccttgttctgagtgtcctgctggaggaccggatccttacc
tgtcccatctcaatctga
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integrated database retrieval system
